SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000123983
Gene: ACSL3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:222860942-222944639 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_009500582 chr2:222751561-222808287 Sample_02_0095 Mammary gland MDA-MB-468 582 9 1536 113 4 74 0 ACSL3
SE_02_012400782 chr2:222773693-222807707 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 782 4 920 76 3 48 0 ACSL3
SE_02_057100917 chr2:222774624-222797261 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 917 8 606 49 1 31 0 ACSL3
SE_02_149300173 chr2:222774710-222814204 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 173 10 1078 85 5 51 0 ACSL3
SE_02_066900398 chr2:222774968-222806864 Sample_02_0669 Prostate prostate cancer_DSG 398 16 868 74 3 41 0 ACSL3
SE_02_016900300 chr2:222784284-222800643 Sample_02_0169 Prostate LNCaP_R1881 300 3 479 35 2 17 0 ACSL3
SE_02_067300337 chr2:222785135-222800720 Sample_02_0673 Prostate LNCAP_FA 337 6 458 31 2 16 0 ACSL3
SE_02_017000490 chr2:222785155-222800473 Sample_02_0170 Prostate LNCaP_R1881_DOX 490 2 452 31 2 16 0 ACSL3
SE_02_051000436 chr2:222785338-222799303 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 436 4 404 29 1 16 0 ACSL3
SE_02_057200644 chr2:222786255-222819716 Sample_02_0572 Brain LN229_1_mM_glucose 644 12 900 64 5 33 0 ACSL3
SE_02_018100566 chr2:222787465-222820607 Sample_02_0181 melanoma COLO679 566 8 879 62 5 35 0 ACSL3
SE_01_003800485 chr2:222794752-222818159 Sample_01_0038 Liver HepG2 485 3 619 47 4 22 0 ACSL3
SE_02_066001047 chr2:222805759-222864142 Sample_02_0660 Mammary gland MCF10DCIS 1047 15 1449 101 3 82 175 ACSL3
SE_02_103602315 chr2:222807538-222845496 Sample_02_1036 Mammary gland HCC70_XY018 2315 14 960 66 2 40 0 ACSL3
SE_02_135900510 chr2:222819496-222863729 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 510 14 1113 85 1 72 175 ACSL3
SE_02_124800652 chr2:222827014-222848626 Sample_02_1248 Bladder RT4 652 5 593 43 0 25 0 ACSL3
SE_02_049200785 chr2:222834335-222864382 Sample_02_0492 Pharyng Detroit 562_LPS 785 6 760 57 1 54 175 ACSL3
SE_02_049100630 chr2:222834506-222903189 Sample_02_0491 Pharyng Detroit 562-Control 630 14 1730 161 3 62 240 ACSL3
SE_02_071201183 chr2:222835188-222863322 Sample_02_0712 Pancreas BxPC3_sgNEG 1183 8 701 54 1 52 175 ACSL3
SE_02_071301013 chr2:222835191-222863386 Sample_02_0713 Pancreas BxPC3_sgTP63 1013 11 701 54 1 52 175 ACSL3
SE_02_151100502 chr2:222835290-222863188 Sample_02_1511 Lung H3122_untreated 502 6 693 54 1 52 175 ACSL3
SE_02_123000757 chr2:222837178-222863253 Sample_02_1230 Lung PC9 757 8 646 49 1 50 175 ACSL3
SE_02_012400516 chr2:222844113-222867831 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 516 5 569 44 1 35 175 ACSL3
SE_02_044500531 chr2:222858604-222927755 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 531 26 1772 172 4 103 583 ACSL3
SE_02_129700341 chr2:222858804-222917780 Sample_02_1297 Lung lung 341 21 1490 150 2 67 322 ACSL3
SE_02_029400314 chr2:222859006-222921008 Sample_02_0294 Pancreatic L3-6_DMSO 314 14 1566 155 2 74 395 ACSL3
SE_02_011001085 chr2:222859038-222960719 Sample_02_0110 Ovaries IOE11 1085 13 2650 235 11 166 856 ACSL3
SE_01_008500877 chr2:222859142-222921154 Sample_01_0085 Stomach stomach 877 9 1565 157 3 74 399 ACSL3
SE_02_125300875 chr2:222859598-222916162 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 875 19 1424 141 2 61 291 ACSL3
SE_01_009400931 chr2:222859749-222929895 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 931 24 1820 178 4 109 614 ACSL3
SE_02_042000601 chr2:222861016-222880117 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 601 7 517 46 0 19 116 ACSL3
SE_02_143801146 chr2:222861032-222925557 Sample_02_1438 Liver LSEC 1146 23 1671 164 4 71 463 ACSL3
SE_02_143601008 chr2:222861035-222921048 Sample_02_1436 Liver LSEC-Ctrl 1008 26 1522 150 3 52 333 ACSL3
SE_02_143700797 chr2:222861035-222927250 Sample_02_1437 Liver LSEC-TNF 797 28 1709 164 4 81 513 ACSL3
SE_02_149301017 chr2:222861043-222870895 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 1017 7 270 22 0 16 111 ACSL3
SE_02_077001093 chr2:222861073-222919869 Sample_02_0770 Ovary OVCA429_shLuc 1093 21 1487 147 2 51 325 ACSL3
SE_02_053000507 chr2:222861525-222905104 Sample_02_0530 Mammary gland MCF10A 507 23 1082 116 2 14 65 ACSL3
SE_02_101701168 chr2:222863495-222946294 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1168 18 2177 215 8 135 681 ACSL3
SE_02_106900330 chr2:222866307-222866782 Sample_02_1069 Bone marrow Bone marrow aspirate 330 1 20 2 0 0 0 ACSL3
SE_02_123300603 chr2:222876958-222900902 Sample_02_1233 Lung PC9_miR-4497 mimic 603 10 539 54 1 0 57 ACSL3
SE_02_123100417 chr2:222877943-222901591 Sample_02_1231 Lung PC9_siMED13L-1 417 7 544 59 1 0 65 ACSL3
SE_02_123200565 chr2:222878106-222899454 Sample_02_1232 Lung PC9_siMED13L-2 565 6 473 49 1 0 25 ACSL3
SE_02_137801079 chr2:222878564-222924605 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1079 23 1150 119 4 52 330 ACSL3
SE_02_073200568 chr2:222895120-222915955 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 568 3 487 47 1 20 91 ACSL3
SE_02_073000496 chr2:222898032-222915881 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 496 3 477 46 1 20 91 ACSL3
SE_02_011800355 chr2:222908794-222915334 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 355 1 178 13 0 16 39 ACSL3
SE_01_005400232 chr2:222908850-222945868 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 232 3 1015 94 6 121 599 ACSL3
SE_02_073100640 chr2:222908884-222915573 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 640 1 176 13 0 15 34 ACSL3
Genomic distribution of SEs associated with ACSL3
Genome Browser

The strength of the tissue affected by the gene

Expression of ACSL3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)