SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000180233
Gene: ZNRF2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:30284597-30367689 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_130300412 chr7:30192623-30251319 Sample_02_1303 Lymphoma RL_tazemetostat 412 20 1500 123 5 53 0 ZNRF2,MIR550A1,MIR550B1
SE_02_147800414 chr7:30206225-30287875 Sample_02_1478 Bone EW-3 414 16 2014 167 1 131 517 ZNRF2,MIR550A1,MIR550B1
SE_02_036400499 chr7:30222056-30253903 Sample_02_0364 Skeletal muscle CTR 499 5 793 77 0 26 0 ZNRF2,MIR550A1,MIR550B1
SE_02_108100301 chr7:30222571-30253568 Sample_02_1081 Muscle CTR shCtrl 301 16 775 76 0 25 0 ZNRF2,MIR550A1,MIR550B1
SE_01_004000324 chr7:30223300-30249306 Sample_01_0040 Haematopoietic and lymphoid tissue Karpas-422 324 3 669 62 0 14 0 ZNRF2,MIR550A1,MIR550B1
SE_02_011700329 chr7:30223633-30249065 Sample_02_0117 Haematopoietic and lymphoid tissue KARPAS-422 329 5 656 61 0 14 0 ZNRF2,MIR550A1,MIR550B1
SE_02_036900739 chr7:30223864-30228918 Sample_02_0369 Skeletal muscle RD 739 2 136 4 0 0 0 ZNRF2
SE_02_037900739 chr7:30223864-30228918 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 739 2 136 4 0 0 0 ZNRF2
SE_02_003300780 chr7:30224222-30291338 Sample_02_0033 Pancreas pancreatic-islets-F 780 11 1673 138 1 123 562 MIR550A1,ZNRF2,MIR550B1
SE_02_004700841 chr7:30224392-30286396 Sample_02_0047 Pancreatic endoderm IIDP/donor790 841 10 1520 133 1 115 517 ZNRF2,MIR550A1,MIR550B1
SE_02_098901603 chr7:30224458-30263765 Sample_02_0989 Kidney kidney cortex_WT 1603 13 971 98 1 43 0 ZNRF2,MIR550A1,MIR550B1
SE_02_075001145 chr7:30224923-30248575 Sample_02_0750 Lymphoma Rec-1_GSI 1145 9 609 59 0 14 0 ZNRF2,MIR550A1,MIR550B1
SE_02_075300569 chr7:30247858-30264493 Sample_02_0753 Embryo ES-derived progenitors_FG type 569 7 379 40 1 40 0 ZNRF2,MIR550A1,MIR550B1
SE_02_075701194 chr7:30249260-30264833 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 1194 3 346 40 1 29 0 ZNRF2,MIR550A1,MIR550B1
SE_02_067201356 chr7:30277921-30288063 Sample_02_0672 Endometrium endometrium cancer_DSG 1356 4 238 12 0 49 517 ZNRF2,MIR550A1,MIR550B1
SE_02_067401028 chr7:30277952-30288119 Sample_02_0674 Endometrium E1_FA 1028 4 237 12 0 49 517 ZNRF2,MIR550A1,MIR550B1
SE_02_147700858 chr7:30278695-30287783 Sample_02_1477 Bone EW-22 858 4 215 11 0 48 517 ZNRF2,MIR550A1,MIR550B1
SE_02_137100540 chr7:30280846-30288135 Sample_02_1371 Pancreas Patu899S-untreated 540 3 187 8 0 35 517 ZNRF2,MIR550A1,MIR550B1
SE_01_009900717 chr7:30281260-30287770 Sample_01_0099 Colon transverse colon 717 4 170 8 0 35 517 ZNRF2,MIR550A1,MIR550B1
SE_02_070701068 chr7:30281500-30289542 Sample_02_0707 Pancreas BxPC3 WT 1068 2 223 8 0 38 517 ZNRF2,MIR550A1,MIR550B1
SE_02_081601535 chr7:30283419-30286904 Sample_02_0816 Ovary Clear cell ovarian cancer 1535 1 97 2 0 33 517 ZNRF2,MIR550A1,MIR550B1
SE_02_080000014 chr7:30283636-30287992 Sample_02_0800 Brain 3679 14 2 132 4 0 33 517 ZNRF2,MIR550A1,MIR550B1
SE_00_005500860 chr7:30283703-30286370 Sample_00_0055 Spleen spleen 34y 860 1 76 1 0 29 517 ZNRF2,MIR550A1,MIR550B1
SE_02_085400482 chr7:30283705-30286502 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 482 1 79 1 0 30 517 ZNRF2,MIR550A1,MIR550B1
SE_02_124800415 chr7:30283839-30288033 Sample_02_1248 Bladder RT4 415 1 124 4 0 33 517 ZNRF2,MIR550A1,MIR550B1
SE_02_098000404 chr7:30284400-30286332 Sample_02_0980 Brain BT245 404 1 51 1 0 19 458 ZNRF2,MIR550A1,MIR550B1
SE_02_126100115 chr7:30284488-30286525 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 115 1 53 1 0 19 438 ZNRF2,MIR550A1,MIR550B1
SE_02_097400437 chr7:30284496-30287796 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 437 2 92 4 0 22 435 ZNRF2,MIR550A1,MIR550B1
SE_02_096500836 chr7:30284509-30288456 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 836 1 114 4 0 22 431 ZNRF2,MIR550A1,MIR550B1
SE_02_122000214 chr7:30284512-30287820 Sample_02_1220 Bone marrow JJN3 214 2 93 4 0 22 430 ZNRF2,MIR550A1,MIR550B1
SE_02_074500975 chr7:30284516-30286314 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 975 1 47 1 0 18 429 ZNRF2,MIR550A1,MIR550B1
SE_02_064801345 chr7:30284581-30287864 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1345 2 98 4 0 21 410 ZNRF2,MIR550A1,MIR550B1
SE_02_108600913 chr7:30284585-30287723 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 913 1 86 4 0 21 408 ZNRF2,MIR550A1,MIR550B1
SE_02_122700809 chr7:30284590-30288093 Sample_02_1227 Bone marrow U266 809 2 103 4 0 21 406 ZNRF2,MIR550A1,MIR550B1
SE_02_136600667 chr7:30284590-30288153 Sample_02_1366 Pancreas BxPC3-untreated 667 2 104 4 0 21 406 ZNRF2,MIR550A1,MIR550B1
SE_01_011200436 chr7:30284593-30287012 Sample_01_0112 Embryonic kidney HEK293_encode 436 2 70 2 0 20 406 ZNRF2,MIR550A1,MIR550B1
SE_02_102800293 chr7:30284613-30287000 Sample_02_1028 Blood HL-60_WT 293 1 69 2 0 19 403 ZNRF2,MIR550A1,MIR550B1
SE_02_064601510 chr7:30284649-30286466 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1510 1 49 1 0 18 388 ZNRF2,MIR550A1,MIR550B1
SE_02_065001220 chr7:30284659-30286860 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 1220 1 59 2 0 19 387 ZNRF2,MIR550A1,MIR550B1
SE_00_004900761 chr7:30284666-30287905 Sample_00_0049 Small intestine small intestine 30y 761 4 97 4 0 21 386 ZNRF2,MIR550A1,MIR550B1
SE_02_130500444 chr7:30284721-30287445 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 444 1 73 2 0 20 362 ZNRF2,MIR550A1,MIR550B1
Genomic distribution of SEs associated with ZNRF2
Genome Browser

The strength of the tissue affected by the gene

Expression of ZNRF2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)