SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000229809
Gene: ZNF688 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:30569346-30572734 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_013200118 chr16:30525352-30611190 Sample_02_0132 Lung 1015_CL 118 13 2003 93 4 199 4562 ZNF764,ZNF688,ZNF747,ZNF785,ZNF768,ZNF689,PRR14
SE_02_013100377 chr16:30550918-30586678 Sample_02_0131 Lung 1015_PT 377 9 839 34 1 76 2391 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_00_000800442 chr16:30550934-30586621 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 442 5 837 34 1 76 2391 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_002200549 chr16:30551223-30586549 Sample_02_0022 Blood CD8donorA 549 7 826 34 1 76 2391 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_001900479 chr16:30552831-30586672 Sample_02_0019 Embryo Neural crest cells 479 7 792 33 1 76 2391 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_133200711 chr16:30554123-30582951 Sample_02_1332 Blood Monomac6_CTRL 711 7 664 27 1 63 1851 ZNF688,ZNF764,ZNF785,ZNF689,ZNF747,ZNF768
SE_02_039601113 chr16:30554845-30583471 Sample_02_0396 Skin NHEK-D 1113 6 667 29 1 65 1881 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_003200354 chr16:30555544-30586924 Sample_02_0032 Pancreas pancreatic-islets-M 354 6 737 30 1 69 2054 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_147500370 chr16:30555983-30582246 Sample_02_1475 Bone CHLA-25 370 5 602 26 1 53 1357 ZNF688,ZNF764,ZNF785,ZNF689,ZNF747,ZNF768
SE_00_003900445 chr16:30557107-30586604 Sample_00_0039 Spleen spleen_3y 445 5 674 29 1 66 1884 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_004200469 chr16:30557111-30586585 Sample_02_0042 Embryo endodermal CyT49_ES_D0 469 3 674 29 1 66 1884 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_02_001700580 chr16:30557212-30586647 Sample_02_0017 Embryo H9_ESC 580 3 672 29 1 66 1884 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_00_004000384 chr16:30557218-30586564 Sample_00_0040 Spleen spleen_30y 384 6 669 29 1 66 1884 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
SE_00_002200821 chr16:30557313-30586567 Sample_00_0022 Lung lung_30y 821 4 667 29 1 66 1884 ZNF688,ZNF785,ZNF764,ZNF747,ZNF768,ZNF689
Genomic distribution of SEs associated with ZNF688
Genome Browser

The strength of the tissue affected by the gene

Expression of ZNF688

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)