SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000122515
Gene: ZMIZ2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:44748581-44769881 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_089201031 chr7:44670017-44717862 Sample_02_0892 Heart left ventricle_LV1215 1031 25 1253 77 1 109 1749 OGDH,ZMIZ2
SE_02_090200788 chr7:44670123-44717961 Sample_02_0902 Heart left ventricle_LV1558 788 23 1255 76 1 109 1749 OGDH,ZMIZ2
SE_02_089700833 chr7:44670200-44717943 Sample_02_0897 Heart left ventricle_LV1325 833 15 1253 76 1 109 1749 OGDH,ZMIZ2
SE_02_088700848 chr7:44670810-44717709 Sample_02_0887 Heart left ventricle_LV1121 848 17 1229 75 1 109 1749 OGDH,ZMIZ2
SE_02_089000737 chr7:44671294-44717644 Sample_02_0890 Heart left ventricle_LV1200 737 18 1210 74 1 109 1749 OGDH,ZMIZ2
SE_00_004600989 chr7:44677969-44717789 Sample_00_0046 Heart right ventricle_34y 989 12 1027 63 1 101 1336 OGDH,ZMIZ2
SE_02_103100105 chr7:44679900-44758651 Sample_02_1031 Head and neck SCC1 contol 105 24 2038 115 1 192 2102 ZMIZ2,OGDH,PPIA
SE_02_104801503 chr7:44693728-44713410 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1503 7 500 36 1 93 1270 OGDH,ZMIZ2
SE_02_138100180 chr7:44693747-44768251 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 180 36 1960 110 1 316 3542 ZMIZ2,OGDH,PPIA
SE_02_093001022 chr7:44696623-44751675 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1022 21 1415 92 1 115 1231 ZMIZ2,OGDH,PPIA
SE_02_103900315 chr7:44697708-44724749 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 315 5 726 54 1 58 774 OGDH,ZMIZ2
SE_02_104600789 chr7:44701064-44771701 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 789 22 1871 114 3 271 3327 ZMIZ2,OGDH,PPIA
SE_02_048100571 chr7:44708945-44748362 Sample_02_0481 Mammary gland MDA-MB231 571 13 1015 63 0 9 61 OGDH,ZMIZ2,PPIA
SE_02_031700590 chr7:44709868-44771086 Sample_02_0317 Neuroblastoma GICAN 590 8 1619 90 2 237 2749 ZMIZ2,PPIA
SE_02_077000970 chr7:44709934-44751930 Sample_02_0770 Ovary OVCA429_shLuc 970 25 1072 66 0 49 256 ZMIZ2,PPIA
SE_02_135400388 chr7:44710118-44751731 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 388 9 1065 66 0 49 256 ZMIZ2,PPIA
SE_02_135200927 chr7:44710172-44737195 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 927 8 688 47 0 0 0 ZMIZ2
SE_02_110700733 chr7:44716700-44770003 Sample_02_1107 Brain SK-N-AS 733 16 1420 76 2 237 2621 ZMIZ2,PPIA
SE_02_076201492 chr7:44723876-44771333 Sample_02_0762 Podocyte podocyte_CTL 1492 7 1245 63 2 237 2779 ZMIZ2,PPIA
SE_02_143801049 chr7:44725581-44751281 Sample_02_1438 Liver LSEC 1049 4 640 35 0 49 256 ZMIZ2,PPIA
SE_02_143700772 chr7:44725700-44753501 Sample_02_1437 Liver LSEC-TNF 772 7 694 39 0 49 256 ZMIZ2,PPIA
SE_02_139900582 chr7:44725781-44742287 Sample_02_1399 Bone U2OS_siMLL3.1 582 9 402 25 0 0 0 ZMIZ2
SE_02_011600629 chr7:44725791-44752027 Sample_02_0116 Mammary gland MDA-MB-231_untreat 629 4 653 38 0 49 256 ZMIZ2,PPIA
SE_02_143601054 chr7:44725856-44751424 Sample_02_1436 Liver LSEC-Ctrl 1054 6 632 37 0 49 256 ZMIZ2,PPIA
SE_02_138300327 chr7:44725994-44767959 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 327 28 1090 50 0 222 2201 ZMIZ2,PPIA
SE_02_156801152 chr7:44726086-44744879 Sample_02_1568 Heart Cardiac progenitor cells 1152 3 452 24 0 0 0 ZMIZ2
SE_02_084600538 chr7:44726118-44748393 Sample_02_0846 Mammary gland MDA-MB-231_untreat 538 8 560 32 0 1 0 ZMIZ2,PPIA
SE_02_103000529 chr7:44726179-44762621 Sample_02_1030 Colon DKO 529 10 926 45 0 144 1340 ZMIZ2,PPIA
SE_02_049901659 chr7:44726533-44739362 Sample_02_0499 Fetal lung IMR90 IR Senescence 1659 5 306 19 0 0 0 ZMIZ2,PPIA
SE_02_099000327 chr7:44726703-44739029 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 327 7 298 19 0 0 0 ZMIZ2
SE_02_099200582 chr7:44726733-44738005 Sample_02_0992 Mammary gland MDA-MB-231_Par 582 3 271 19 0 0 0 ZMIZ2
SE_02_082601319 chr7:44726740-44752512 Sample_02_0826 Stomach gastric tumor 1319 9 644 35 0 49 256 ZMIZ2,PPIA
SE_02_132100428 chr7:44726741-44756001 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 428 10 731 36 0 53 256 ZMIZ2,PPIA
SE_02_099100361 chr7:44726784-44742657 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 361 4 382 22 0 0 0 ZMIZ2
SE_02_077101118 chr7:44726847-44754350 Sample_02_0771 Ovary OVCA429_shGRHL2 1118 12 684 36 0 53 256 ZMIZ2,PPIA
SE_02_017900415 chr7:44726865-44751274 Sample_02_0179 Urinary bladder T24 415 5 607 32 0 49 256 ZMIZ2,PPIA
SE_02_103200546 chr7:44726905-44759181 Sample_02_1032 Head and neck SCC1 JQ1 546 9 815 38 0 91 773 ZMIZ2,PPIA
SE_02_029400976 chr7:44726981-44770226 Sample_02_0294 Pancreatic L3-6_DMSO 976 5 1146 58 2 237 2641 ZMIZ2,PPIA
SE_02_113400611 chr7:44726985-44737420 Sample_02_1134 Bone U2OS-interphase 611 5 254 16 0 0 0 ZMIZ2
SE_02_026000414 chr7:44727110-44751518 Sample_02_0260 Lung NCI-H1299_EGFP-NEO_reporter_cells_SB939 414 9 612 34 0 49 256 ZMIZ2,PPIA
SE_02_094600588 chr7:44727125-44738361 Sample_02_0946 Tongue HN12 588 3 277 19 0 0 0 ZMIZ2
SE_02_064801252 chr7:44727128-44751515 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1252 6 612 34 0 49 256 ZMIZ2,PPIA
SE_02_113600499 chr7:44727155-44737250 Sample_02_1136 Bone U2OS-anaphase/telophase 499 2 245 16 0 0 0 ZMIZ2
SE_02_153400629 chr7:44727192-44737776 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 629 3 260 16 0 0 0 ZMIZ2
SE_02_111500683 chr7:44727192-44738276 Sample_02_1115 Liver HepG2 683 3 276 19 0 0 0 ZMIZ2
SE_02_082900271 chr7:44727198-44751700 Sample_02_0829 Lung H1703 SMARCA4-infected 271 6 618 35 0 49 256 ZMIZ2,PPIA
SE_02_044400875 chr7:44727215-44771638 Sample_02_0444 Bone osteosarcoma tumor P10 875 11 1182 62 3 237 2781 ZMIZ2,PPIA
SE_02_064900711 chr7:44727216-44751506 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 711 8 611 34 0 49 256 ZMIZ2,PPIA
SE_02_138200497 chr7:44727217-44768139 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 497 20 1078 49 0 223 2245 ZMIZ2,PPIA
SE_02_111300717 chr7:44727254-44738461 Sample_02_1113 Bone U2OS 717 3 280 19 0 0 0 ZMIZ2
SE_02_076901089 chr7:44727257-44751437 Sample_02_0769 Ovary HEYA8 1089 13 608 34 0 49 256 ZMIZ2,PPIA
SE_02_039601021 chr7:44727281-44769867 Sample_02_0396 Skin NHEK-D 1021 16 1128 57 2 237 2597 ZMIZ2,PPIA
SE_02_065000554 chr7:44727287-44751481 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 554 8 607 34 0 49 256 ZMIZ2,PPIA
SE_02_064500745 chr7:44727337-44751954 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 745 11 619 35 0 49 256 ZMIZ2,PPIA
SE_02_065900500 chr7:44727337-44769651 Sample_02_0659 Lung H23 500 14 1116 55 1 237 2566 ZMIZ2,PPIA
SE_02_151000303 chr7:44727364-44769583 Sample_02_1510 Lung H3122_LR_Pano 303 13 1115 55 1 237 2553 ZMIZ2,PPIA
SE_02_116801122 chr7:44727403-44770567 Sample_02_1168 Biliary H69_TGF Vehicle_2 1122 12 1151 58 2 237 2677 ZMIZ2,PPIA
SE_02_057100851 chr7:44727508-44744350 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 851 9 415 23 0 0 0 ZMIZ2
SE_02_057200813 chr7:44727544-44743972 Sample_02_0572 Brain LN229_1_mM_glucose 813 4 408 22 0 0 0 ZMIZ2
SE_02_154101080 chr7:44727554-44755530 Sample_02_1541 Nasopharyngeal HNE1 1080 7 710 36 0 53 256 ZMIZ2,PPIA
SE_02_102900858 chr7:44729902-44762703 Sample_02_1029 Colon HCT116 858 9 864 42 0 144 1341 ZMIZ2,PPIA
SE_02_104300306 chr7:44730259-44809180 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 306 22 2157 157 6 303 3299 ZMIZ2,PPIA,H2AFV
SE_02_104800397 chr7:44738057-44791221 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 397 13 1407 89 6 239 2781 ZMIZ2,PPIA
SE_02_037800229 chr7:44744879-44771887 Sample_02_0378 Skeletal muscle SCMC 229 3 753 39 3 238 2781 ZMIZ2,PPIA
SE_01_008401484 chr7:44747657-44770716 Sample_01_0084 Spleen spleen 1484 3 636 28 2 237 2698 ZMIZ2,PPIA
SE_02_122000128 chr7:44747668-44754495 Sample_02_1220 Bone marrow JJN3 128 4 160 5 0 53 256 ZMIZ2,PPIA
SE_02_073500363 chr7:44747694-44771833 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 363 2 660 31 3 238 2781 ZMIZ2,PPIA
SE_02_122400519 chr7:44747961-44770604 Sample_02_1224 Bone marrow normal plasma cell 519 8 624 28 2 236 2682 ZMIZ2,PPIA
SE_02_122700625 chr7:44748492-44754782 Sample_02_1227 Bone marrow U266 625 4 154 5 0 52 221 ZMIZ2,PPIA
SE_02_073300325 chr7:44748505-44770473 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 325 3 608 27 2 236 2622 ZMIZ2,PPIA
SE_02_072900316 chr7:44748513-44770716 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 316 7 617 28 2 236 2653 ZMIZ2,PPIA
SE_02_122100856 chr7:44748515-44752781 Sample_02_1221 Bone marrow KMS11 856 2 107 4 0 48 211 ZMIZ2,PPIA
SE_02_073100332 chr7:44748521-44770391 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 332 2 607 27 2 236 2609 ZMIZ2,PPIA
SE_02_073000519 chr7:44748557-44753991 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 519 1 127 5 0 50 193 ZMIZ2,PPIA
SE_02_073200401 chr7:44748565-44770278 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 401 5 603 27 2 235 2578 ZMIZ2,PPIA
SE_02_123900281 chr7:44749047-44770382 Sample_02_1239 Skin Waga_virus_positive 281 5 601 27 2 206 2433 ZMIZ2,PPIA
SE_02_104000543 chr7:44750739-44769875 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 543 6 535 26 2 197 2341 ZMIZ2,PPIA
SE_02_155301044 chr7:44750887-44773101 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 1044 11 625 34 4 199 2525 ZMIZ2,PPIA
SE_02_121301009 chr7:44750974-44771563 Sample_02_1213 Brain GBM31 1009 5 580 29 2 197 2525 ZMIZ2,PPIA
SE_02_117300878 chr7:44751026-44770155 Sample_02_1173 Brain GBM01 878 5 540 26 2 197 2378 ZMIZ2,PPIA
SE_02_063000235 chr7:44751146-44770953 Sample_02_0630 Gastrointestinal Stromal GIST-T1_Imatinib 235 4 564 28 2 195 2473 ZMIZ2,PPIA
SE_02_036400545 chr7:44754009-44771940 Sample_02_0364 Skeletal muscle CTR 545 2 518 26 3 186 2525 ZMIZ2,PPIA
SE_02_037000574 chr7:44754680-44771770 Sample_02_0370 Skeletal muscle RH4 574 2 488 26 3 185 2525 ZMIZ2,PPIA
SE_02_155700518 chr7:44761460-44769842 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 518 3 246 16 2 109 1393 ZMIZ2,PPIA
SE_02_107800453 chr7:44761625-44772626 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 453 7 321 22 3 106 1544 ZMIZ2,PPIA
SE_02_063100457 chr7:44761713-44770626 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 457 4 276 18 2 104 1429 ZMIZ2,PPIA
SE_02_085400435 chr7:44765741-44770182 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 435 1 146 10 2 49 834 ZMIZ2,PPIA
SE_02_107900371 chr7:44765753-44771549 Sample_02_1079 Muscle RMS246_PAX3-NCOA1 371 4 182 12 2 49 976 ZMIZ2,PPIA
SE_02_037300432 chr7:44765965-44771776 Sample_02_0373 Skeletal muscle RMS206 432 1 181 14 3 50 924 ZMIZ2,PPIA
SE_02_036900638 chr7:44766135-44771861 Sample_02_0369 Skeletal muscle RD 638 1 182 14 3 50 889 ZMIZ2,PPIA
SE_02_037900638 chr7:44766135-44771861 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 638 1 182 14 3 50 889 ZMIZ2,PPIA
SE_02_074000678 chr7:44766254-44771232 Sample_02_0740 Muscle RH3 678 1 168 11 2 42 838 ZMIZ2,PPIA
SE_02_108000700 chr7:44767107-44770259 Sample_02_1080 Muscle JR1 shCtrl 700 1 104 10 2 23 577 ZMIZ2,PPIA
Genomic distribution of SEs associated with ZMIZ2
Genome Browser

The strength of the tissue affected by the gene

Expression of ZMIZ2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)