SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000147905
Gene: ZCCHC7 Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:37120574-37358149 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_115400194 chr9:37066274-37147499 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 194 13 1960 150 1 340 811 EBLN3,ZCCHC7,PAX5
SE_01_005300461 chr9:37099274-37148414 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 461 8 1166 92 0 226 289 ZCCHC7,LOC100506710
SE_02_021300633 chr9:37099908-37158709 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 633 8 1408 111 0 248 289 ZCCHC7,LOC100506710
SE_02_038700506 chr9:37101051-37144988 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 506 10 1043 84 0 191 289 ZCCHC7,LOC100506710
SE_01_005500462 chr9:37106501-37147174 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 462 5 944 76 0 187 289 ZCCHC7,LOC100506710
SE_02_017600756 chr9:37110701-37150499 Sample_02_0176 Peripheral blood LOUCY 756 7 918 73 0 195 289 ZCCHC7,LOC100506710
SE_02_130200002 chr9:37114190-37424089 Sample_02_1302 Lymphoma RL DMSO 2 74 7820 639 3 1036 832 ZCCHC7,GRHPR,ZBTB5,EBLN3
SE_02_115200003 chr9:37114587-37342672 Sample_02_1152 Lymphoma RL_WT_gRNA1 3 45 5279 357 1 913 487 ZCCHC7,EBLN3
SE_02_109700269 chr9:37114916-37152014 Sample_02_1097 Haematopoietic and lymphoid tissue 697 269 21 858 71 0 180 289 ZCCHC7,EBLN3
SE_02_122900057 chr9:37118287-37310005 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 57 100 4406 291 0 625 445 ZCCHC7,EBLN3,POLR1E,FBXO10
SE_01_002000830 chr9:37119621-37164345 Sample_01_0020 Blood B-cell 830 11 1098 91 0 197 289 ZCCHC7,LOC100506710
SE_02_036000073 chr9:37119623-37149192 Sample_02_0360 Haematopoietic and lymphoid tissue SEM 73 7 683 58 0 168 289 ZCCHC7,LOC100506710
SE_02_115300490 chr9:37119723-37157584 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 490 6 905 76 0 186 289 ZCCHC7,EBLN3
SE_02_115500008 chr9:37119743-37344178 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 8 50 5215 353 1 909 487 ZCCHC7,EBLN3
SE_02_106900005 chr9:37120150-37348118 Sample_02_1069 Bone marrow Bone marrow aspirate 5 94 5306 366 1 907 487 ZCCHC7,EBLN3
SE_02_125100101 chr9:37120523-37152134 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 101 18 748 61 0 166 237 ZCCHC7,EBLN3
SE_02_124900003 chr9:37120544-37341341 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 3 133 5122 343 1 895 433 ZCCHC7,EBLN3
SE_02_125200002 chr9:37120552-37372496 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 2 127 6000 418 3 943 646 ZCCHC7,EBLN3
SE_02_125000118 chr9:37122655-37150687 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 118 14 643 54 0 145 71 ZCCHC7,EBLN3
SE_02_099900352 chr9:37135428-37149174 Sample_02_0999 Lymphoma OCI-LY1_966 352 1 271 25 0 88 0 ZCCHC7
SE_02_012200496 chr9:37136256-37147569 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 496 1 228 22 0 87 0 ZCCHC7
SE_02_036200626 chr9:37136839-37149408 Sample_02_0362 Haematopoietic and lymphoid tissue REH 626 1 251 22 0 89 0 ZCCHC7
SE_02_154300238 chr9:37137048-37149590 Sample_02_1543 Gastrointestinal Stromal GIST-48 238 3 251 22 0 88 0 ZCCHC7
SE_02_158600413 chr9:37137659-37148435 Sample_02_1586 Blood SupB15 ACY1035 413 14 212 22 0 83 0 ZCCHC7
SE_02_158500378 chr9:37137732-37146756 Sample_02_1585 Blood SupB15 DMSO 378 3 173 19 0 83 0 ZCCHC7
SE_02_115300297 chr9:37170841-37262449 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 297 27 2044 123 0 319 35 ZCCHC7
SE_02_115400384 chr9:37171064-37223000 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 384 9 1227 62 0 207 35 ZCCHC7
SE_02_125100007 chr9:37176831-37348137 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 7 88 3891 246 1 704 198 ZCCHC7
SE_02_125000008 chr9:37177083-37340193 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 8 92 3695 224 1 685 198 ZCCHC7
SE_01_002000015 chr9:37177293-37355516 Sample_01_0020 Blood B-cell 15 26 4069 260 3 719 287 ZCCHC7
SE_02_036000045 chr9:37177353-37262225 Sample_02_0360 Haematopoietic and lymphoid tissue SEM 45 23 1848 106 0 309 35 ZCCHC7
SE_02_109700185 chr9:37177710-37225947 Sample_02_1097 Haematopoietic and lymphoid tissue 697 185 29 1100 50 0 198 35 ZCCHC7
SE_02_028800194 chr9:37178287-37210776 Sample_02_0288 Tonsil CB5_H3K27Ac 194 5 767 36 0 138 35 ZCCHC7
SE_02_106500435 chr9:37178457-37212822 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 435 18 814 37 0 138 35 ZCCHC7
SE_02_099800010 chr9:37179064-37343811 Sample_02_0998 Lymphoma OCI-LY1_DMSO 10 125 3747 231 1 703 198 ZCCHC7
SE_02_062200100 chr9:37182549-37237437 Sample_02_0622 Blood EOL1_Naive 100 17 1226 56 0 141 35 ZCCHC7
SE_02_078400845 chr9:37182742-37212946 Sample_02_0784 Blood OSU-CLL 845 11 727 31 0 74 35 ZCCHC7
SE_02_101701183 chr9:37183834-37216579 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1183 9 786 31 0 131 35 ZCCHC7
SE_02_122300476 chr9:37184508-37211601 Sample_02_1223 Bone marrow KMS28BM 476 9 649 26 0 72 35 ZCCHC7
SE_02_021300237 chr9:37184875-37214897 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 237 3 716 29 0 81 35 ZCCHC7
SE_02_073900503 chr9:37184905-37211575 Sample_02_0739 Blood Nalm6 503 7 636 26 0 72 35 ZCCHC7
SE_02_017600464 chr9:37185054-37216029 Sample_02_0176 Peripheral blood LOUCY 464 4 725 28 0 131 35 ZCCHC7
SE_02_088500420 chr9:37185088-37210381 Sample_02_0885 Blood NALM6_2 420 5 600 22 0 70 35 ZCCHC7
SE_02_122500378 chr9:37185208-37212584 Sample_02_1225 Bone marrow RAJI 378 21 648 25 0 72 35 ZCCHC7
SE_02_057300463 chr9:37185220-37210311 Sample_02_0573 Blood Nalm6_1 463 9 597 22 0 70 35 ZCCHC7
SE_02_158600237 chr9:37185315-37200707 Sample_02_1586 Blood SupB15 ACY1035 237 14 377 13 0 64 35 ZCCHC7
SE_02_121800355 chr9:37185356-37212724 Sample_02_1218 Bone marrow Daudi 355 19 650 26 0 72 35 ZCCHC7,ZBTB5
SE_02_075800293 chr9:37185358-37211101 Sample_02_0758 Peripheral blood REH 293 7 611 25 0 72 35 ZCCHC7
SE_02_078200938 chr9:37185442-37213005 Sample_02_0782 Blood MEC1 938 11 657 26 0 72 35 ZCCHC7
SE_02_122400859 chr9:37185463-37211263 Sample_02_1224 Bone marrow normal plasma cell 859 9 611 25 0 72 35 ZCCHC7
SE_02_158500381 chr9:37185558-37199026 Sample_02_1585 Blood SupB15 DMSO 381 9 307 11 0 62 35 ZCCHC7
SE_01_005500199 chr9:37185669-37213644 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 199 4 671 26 0 75 35 ZCCHC7
SE_01_009600245 chr9:37186040-37211413 Sample_01_0096 B-cell lymphoma DOHH2 245 5 607 25 0 72 35 ZCCHC7
SE_02_012300184 chr9:37186120-37211781 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 184 4 614 25 0 72 35 ZCCHC7
SE_00_000500637 chr9:37186210-37211252 Sample_00_0005 Blood B-cell 637 7 601 25 0 72 35 ZCCHC7
SE_02_002500371 chr9:37186712-37212994 Sample_02_0025 Blood CD19donorA 371 16 636 26 0 68 28 ZCCHC7
SE_02_141300159 chr9:37186797-37203043 Sample_02_1413 Muscle RH4_sgBRG1 159 2 394 13 0 59 19 ZCCHC7
SE_02_139300620 chr9:37188046-37210294 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 620 7 531 22 0 63 0 ZCCHC7
SE_01_002100552 chr9:37191158-37216532 Sample_01_0021 Skin bipolar-neuron 552 4 608 27 0 124 0 ZCCHC7
SE_02_105901065 chr9:37196335-37222193 Sample_02_1059 Bone A673_WT 1065 12 612 27 0 89 0 ZCCHC7
SE_02_147301067 chr9:37196335-37222193 Sample_02_1473 Bone A-673 1067 12 612 27 0 89 0 ZCCHC7
SE_02_006400537 chr9:37231565-37253585 Sample_02_0064 Embryo DN-Early_G1 537 3 420 30 0 105 0 ZCCHC7
SE_02_038700524 chr9:37239269-37301769 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 524 15 1363 82 0 189 0 ZCCHC7
SE_00_001800373 chr9:37243196-37253928 Sample_00_0018 Dermal fibroblasts iPS-18axian 373 2 195 11 0 62 0 ZCCHC7
SE_02_157001489 chr9:37243340-37260489 Sample_02_1570 iPSCs EiPSC 1489 7 347 30 0 64 0 ZCCHC7
Genomic distribution of SEs associated with ZCCHC7
Genome Browser

The strength of the tissue affected by the gene

Expression of ZCCHC7

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)