SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000180667
Gene: YOD1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:207043849-207052980 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077501666 chr1:207040999-207060221 Sample_02_0775 Pancreas EndoC-BH1_SE 1666 6 470 17 1 102 956 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA,PIGR,C1orf116
SE_04_000100546 chr1:207044621-207054214 Sample_04_0001 Blood heat shocked K562 546 1 245 13 1 93 789 PFKFB2,YOD1,C4BPB,C1ORF116
SE_04_000200606 chr1:207045381-207055416 Sample_04_0002 Blood cold shocked K562 606 1 251 13 1 89 789 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_02_113000780 chr1:207046207-207053774 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 780 2 190 12 1 85 671 PFKFB2,YOD1,C4BPB,C1ORF116
SE_01_003600512 chr1:207047857-207053966 Sample_01_0036 Cervix HeLa-S3 512 1 153 10 1 78 586 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_076000426 chr1:207047988-207054400 Sample_02_0760 Ovary BIN-67_SMARCA4 426 1 158 10 1 77 579 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_01_003900448 chr1:207048023-207053913 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 448 1 149 10 1 77 576 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_088400663 chr1:207048489-207054465 Sample_02_0884 Colon LoVo 663 1 150 9 0 70 548 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_01_004501075 chr1:207049030-207053936 Sample_01_0045 Mammary gland mammary-epithelial-cell 1075 1 128 6 0 59 495 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_002100493 chr1:207049272-207054131 Sample_02_0021 Colon V429 493 1 125 6 0 52 473 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_151300762 chr1:207049274-207055344 Sample_02_1513 Lung Transitional AT2->1 cells 762 1 147 6 0 52 522 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA,PIGR,C1orf116
SE_02_081900815 chr1:207049281-207055279 Sample_02_0819 Ovary Mucinous ovarian cancer 815 1 147 6 0 52 521 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_02_054500810 chr1:207049308-207053965 Sample_02_0545 Bone marrow K562 WT 810 1 122 6 0 51 468 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_070500621 chr1:207049317-207054512 Sample_02_0705 Pancreas AsPC1 WT 621 1 133 6 0 51 466 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_02_122800932 chr1:207049337-207053804 Sample_02_1228 Mammary gland MDA-MB-231_2 932 1 120 6 0 50 465 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_136500577 chr1:207049340-207054355 Sample_02_1365 Pancreas AsPC1-untreated 577 1 130 6 0 50 465 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_02_076500503 chr1:207049363-207054653 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 503 1 136 6 0 49 479 PFKFB2,YOD1,C4BPB,C1ORF116,C4BPA
SE_02_105400633 chr1:207049368-207053897 Sample_02_1054 Esophagus SKGT4 633 1 122 6 0 48 462 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_158401314 chr1:207049425-207053823 Sample_02_1584 Brain U87 GBM_Mock 1314 1 119 6 0 45 456 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_020400195 chr1:207049448-207054133 Sample_02_0204 Stomach IM95 195 1 124 6 0 45 455 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_024000730 chr1:207049532-207053941 Sample_02_0240 Colon V429_2 730 1 119 6 0 42 446 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_123000624 chr1:207049723-207053803 Sample_02_1230 Lung PC9 624 1 116 6 0 33 427 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_093800775 chr1:207050001-207054158 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 775 1 113 6 0 33 417 PFKFB2,YOD1,C4BPB,C1ORF116
SE_02_147000968 chr1:207050204-207053888 Sample_02_1470 Umbilical Vein H441 968 1 105 6 0 33 417 PFKFB2,YOD1,C4BPB,C1ORF116
Genomic distribution of SEs associated with YOD1
Genome Browser

The strength of the tissue affected by the gene

Expression of YOD1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)