SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000165633
Gene: VSTM4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr10:49014236-49115522 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122700137 chr10:49023085-49081931 Sample_02_1227 Bone marrow U266 137 20 1731 174 7 173 216 VSTM4,FAM170B-AS1,MIR4294
SE_00_005100290 chr10:49047587-49113147 Sample_00_0051 Adrenal gland adrenal gland 30y 290 37 1897 184 14 170 592 VSTM4,FAM170B,FAM170B-AS1
SE_02_046500436 chr10:49049008-49118151 Sample_02_0465 Adipose subcutaneous adipocytes 436 24 1991 203 16 178 669 VSTM4,FAM170B,FAM170B-AS1
SE_02_090800975 chr10:49052368-49117765 Sample_02_0908 Heart left ventricle_DCM_LV1262 975 25 1886 193 16 159 669 VSTM4,FAM170B,FAM170B-AS1
SE_02_090100920 chr10:49052757-49115375 Sample_02_0901 Heart left ventricle_LV1471 920 24 1818 183 15 148 553 VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128
SE_02_091301292 chr10:49052807-49115457 Sample_02_0913 Heart left ventricle_DCM_LV1304 1292 20 1819 183 15 148 588 VSTM4,FAM170B,FAM170B-AS1
SE_02_091201133 chr10:49052817-49115297 Sample_02_0912 Heart left ventricle_DCM_LV1300 1133 23 1815 183 15 148 527 VSTM4,FAM170B,FAM170B-AS1
SE_02_091700900 chr10:49053143-49113529 Sample_02_0917 Heart left ventricle_DCM_LV1433 900 17 1754 173 14 142 517 VSTM4,FAM170B,FAM170B-AS1
SE_02_091800887 chr10:49053159-49113724 Sample_02_0918 Heart left ventricle_DCM_LV1437 887 16 1758 173 14 140 517 VSTM4,FAM170B,FAM170B-AS1
SE_02_104602509 chr10:49056361-49110231 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2509 15 1581 154 13 119 517 VSTM4,FAM170B,FAM170B-AS1
SE_01_009300934 chr10:49058283-49118039 Sample_01_0093 Aorta ascending aorta 934 13 1733 176 16 143 669 VSTM4,FAM170B,FAM170B-AS1
SE_01_010600457 chr10:49058773-49083755 Sample_01_0106 Adrenal gland adrenal gland 54y 457 9 747 70 3 67 89 VSTM4,FAM170B-AS1
SE_02_090501078 chr10:49068701-49115399 Sample_02_0905 Heart left ventricle_DCM_LV1033 1078 15 1367 135 14 110 530 VSTM4,FAM170B,FAM170B-AS1
Genomic distribution of SEs associated with VSTM4
Genome Browser

The strength of the tissue affected by the gene

Expression of VSTM4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)