Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000169764
Gene: UGP2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:63840952-63891562 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_152400413 chr2:63718653-63741742 Sample_02_1524 Lung H3122 DMSO 413 9 510 24 0 0 0 UGP2
SE_02_032700815 chr2:63719960-63742425 Sample_02_0327 Liver hepatocytes_d6 815 5 493 22 0 0 0 UGP2
SE_02_032601212 chr2:63720364-63742227 Sample_02_0326 Liver hepatocytes_d3 1212 5 479 22 0 0 0 UGP2
SE_02_032501077 chr2:63720401-63742458 Sample_02_0325 Liver hepatocytes_d1 1077 6 483 22 0 0 0 UGP2
SE_02_152300161 chr2:63732739-63748197 Sample_02_1523 Lung A549 DMSO 161 5 349 11 0 0 0 UGP2
SE_02_008800620 chr2:63734582-63742913 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 620 2 183 5 0 0 0 UGP2
SE_02_009300315 chr2:63784459-63793600 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 315 2 184 6 1 0 0 UGP2
SE_02_137400910 chr2:63785246-63793592 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 910 11 170 5 1 0 0 UGP2
SE_01_001800542 chr2:63785891-63793665 Sample_01_0018 Submandibular Salivary Gland ACC112 542 1 161 4 0 0 0 UGP2
SE_02_008900589 chr2:63786182-63793572 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 589 5 149 4 0 0 0 UGP2
SE_02_137700855 chr2:63786435-63794590 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 855 6 161 4 0 0 0 UGP2
SE_02_009000264 chr2:63786514-63792089 Sample_02_0090 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_6 264 3 103 3 0 0 0 UGP2
SE_02_137801339 chr2:63787193-63793597 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1339 4 125 3 0 0 0 UGP2
SE_02_127800048 chr2:63813034-63894686 Sample_02_1278 Chordoma UCH1_DMSO_48h 48 21 2019 127 5 202 817 UGP2,VPS54
SE_02_127901476 chr2:63813929-63872675 Sample_02_1279 Bone Mesenchymal stem cells 1476 12 1400 94 2 103 406 UGP2
SE_02_058600162 chr2:63814184-63887501 Sample_02_0586 Chordal patient-derived chordoma MGH_4 162 34 1788 112 5 151 614 UGP2
SE_02_101700224 chr2:63814433-63892816 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 224 20 1944 125 5 178 744 UGP2,VPS54
SE_02_090400475 chr2:63814504-63876957 Sample_02_0904 Heart left ventricle_DCM_LV1028 475 20 1500 96 3 113 406 UGP2
SE_02_091300375 chr2:63814662-63896034 Sample_02_0913 Heart left ventricle_DCM_LV1304 375 25 2032 131 5 200 817 UGP2,VPS54
SE_02_150300641 chr2:63814742-63873780 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 641 15 1419 93 2 103 406 UGP2
SE_02_090500478 chr2:63814817-63896090 Sample_02_0905 Heart left ventricle_DCM_LV1033 478 26 2027 131 5 200 817 UGP2,VPS54
SE_02_149800295 chr2:63814890-63872738 Sample_02_1498 Brain SHEP-21N_DOX_2h 295 17 1383 92 2 101 406 UGP2
SE_02_090300538 chr2:63814917-63876573 Sample_02_0903 Heart left ventricle_DCM_LV1009 538 23 1485 94 2 113 406 UGP2
SE_02_149700305 chr2:63815108-63872756 Sample_02_1497 Brain SHEP-21N 305 19 1379 91 2 97 406 UGP2
SE_02_089700354 chr2:63815299-63895887 Sample_02_0897 Heart left ventricle_LV1325 354 23 2018 130 5 195 817 UGP2,VPS54
SE_02_090800482 chr2:63815324-63899780 Sample_02_0908 Heart left ventricle_DCM_LV1262 482 31 2105 137 6 212 871 UGP2,VPS54
SE_02_091000365 chr2:63815328-63895933 Sample_02_0910 Heart left ventricle_DCM_LV1275 365 37 2019 130 5 195 817 UGP2,VPS54
SE_02_150200680 chr2:63815354-63873501 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 680 16 1401 92 2 98 406 UGP2
SE_02_091100480 chr2:63815445-63876120 Sample_02_0911 Heart left ventricle_DCM_LV1290 480 26 1468 93 2 108 406 UGP2
SE_02_126600581 chr2:63816196-63872727 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 581 15 1357 91 2 90 406 UGP2
SE_01_008200698 chr2:63816239-63888947 Sample_01_0082 Right lobe of liver right-lobe-of-liver 698 16 1789 110 5 149 638 UGP2
SE_02_035700097 chr2:63816246-63845070 Sample_02_0357 Colon Colo320 97 4 617 30 0 54 306 UGP2
SE_02_121800952 chr2:63816312-63828403 Sample_02_1218 Bone marrow Daudi 952 6 223 9 0 13 0 UGP2
SE_02_126500736 chr2:63816335-63876528 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 736 13 1457 93 2 101 406 UGP2
SE_02_139600083 chr2:63816388-63850046 Sample_02_1396 Colon COLO320HSR_DMSO 83 8 731 35 0 65 306 UGP2
SE_01_007600190 chr2:63817326-63906347 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 190 5 2238 150 6 205 871 VPS54,UGP2
SE_01_009300720 chr2:63818154-63900184 Sample_01_0093 Aorta ascending aorta 720 25 2058 136 6 205 871 UGP2,VPS54,WDPCP
SE_01_009700275 chr2:63819146-63896113 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 275 24 1952 129 5 185 817 UGP2,VPS54
SE_01_003700835 chr2:63819194-63844697 Sample_01_0037 Liver hepatocyte 835 3 557 29 0 50 306 UGP2
SE_02_113600353 chr2:63825676-63843340 Sample_02_1136 Bone U2OS-anaphase/telophase 353 3 399 17 0 38 306 UGP2
SE_02_012400158 chr2:63826017-63867115 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 158 5 1026 63 2 76 406 UGP2
SE_02_004000521 chr2:63826818-63863760 Sample_02_0040 Embryo PFG 521 7 930 58 2 76 406 UGP2
SE_02_038200149 chr2:63826985-63891919 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 149 5 1682 115 5 143 711 UGP2
SE_01_002300123 chr2:63827833-63900219 Sample_01_0023 Embryo cardiac-muscle-cell 123 10 1873 128 6 192 871 VPS54,UGP2
SE_02_098200308 chr2:63830255-63854626 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 308 7 587 29 0 57 306 UGP2
SE_02_097300222 chr2:63830617-63854112 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 222 3 567 26 0 53 306 UGP2
SE_02_098100257 chr2:63830732-63853524 Sample_02_0981 Brain H3.3K27M-KO_BT245-C4P6 257 3 536 26 0 51 306 UGP2
SE_02_141000980 chr2:63835864-63855522 Sample_02_1410 Brain GSC6 980 8 480 26 0 57 306 UGP2
SE_02_074900625 chr2:63835892-63849989 Sample_02_0749 Mammary gland HCC1599_GSI 625 6 336 17 0 49 306 UGP2
SE_02_074800566 chr2:63836315-63850267 Sample_02_0748 Mammary gland HCC1599_WO 566 5 332 16 0 48 306 UGP2
SE_02_068500726 chr2:63836634-63850060 Sample_02_0685 Lung NCI-H1048_no infection 726 3 323 15 0 46 306 UGP2
SE_02_083300985 chr2:63837345-63858116 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 985 5 527 31 0 65 402 UGP2
SE_01_009400355 chr2:63837678-63900359 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 355 25 1661 117 6 180 871 UGP2,VPS54
SE_02_032600541 chr2:63838605-63874835 Sample_02_0326 Liver hepatocytes_d3 541 7 962 72 2 66 406 UGP2
SE_02_032501073 chr2:63838641-63872906 Sample_02_0325 Liver hepatocytes_d1 1073 6 910 72 2 64 406 UGP2
SE_02_032700557 chr2:63838810-63892234 Sample_02_0327 Liver hepatocytes_d6 557 13 1434 103 5 132 711 UGP2
SE_02_036200368 chr2:63839180-63857595 Sample_02_0362 Haematopoietic and lymphoid tissue REH 368 3 478 29 0 56 352 UGP2
SE_02_006500106 chr2:63839251-63855701 Sample_02_0065 Embryo KO2-Late_G1 106 1 419 26 0 47 306 UGP2
SE_02_022200180 chr2:63839252-63877661 Sample_02_0222 Blood DU-528 180 2 1020 76 4 75 406 UGP2
SE_02_036300729 chr2:63839310-63857236 Sample_02_0363 Haematopoietic and lymphoid tissue 697 729 2 467 29 0 56 352 UGP2
SE_01_004300187 chr2:63839353-63867195 Sample_01_0043 Blood KOPT-K1 187 1 746 51 2 63 406 UGP2
SE_01_002500198 chr2:63839404-63883233 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 198 11 1168 84 5 84 458 UGP2
SE_02_012500034 chr2:63839421-63867762 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 34 3 763 53 2 63 406 UGP2
SE_02_075800608 chr2:63839428-63866658 Sample_02_0758 Peripheral blood REH 608 7 728 50 2 63 406 UGP2
SE_02_003600110 chr2:63839545-63855297 Sample_02_0036 Embryo H7 110 1 402 23 0 47 306 UGP2
SE_01_003300020 chr2:63839684-63872488 Sample_01_0033 Embryo H9 20 5 881 69 2 63 406 UGP2
SE_02_157200019 chr2:63839691-63895657 Sample_02_1572 iPSCs FiPSC 19 16 1520 108 5 162 817 UGP2,VPS54
SE_02_006300662 chr2:63839718-63877559 Sample_02_0063 Skin Keratinocytes 662 4 1011 76 4 75 406 UGP2
SE_02_023400992 chr2:63839723-63909505 Sample_02_0234 Tonsil Th17 992 16 1862 138 7 179 871 VPS54,UGP2
SE_02_157000029 chr2:63839725-63861576 Sample_02_1570 iPSCs EiPSC 29 6 593 43 1 63 406 UGP2
SE_02_117200055 chr2:63839749-63858312 Sample_02_1172 Embryo H9 WT 55 2 495 32 0 61 406 UGP2
SE_02_038100290 chr2:63839816-63882075 Sample_02_0381 Heart purified cardiomyocyte WT 290 6 1132 83 5 77 406 UGP2
SE_00_002401220 chr2:63839824-63843130 Sample_00_0024 Embryo mesendoderm 1220 1 92 5 0 24 306 UGP2
SE_02_037200490 chr2:63839829-63843360 Sample_02_0372 Skeletal muscle RMS008 490 1 101 5 0 25 306 UGP2
SE_02_026100780 chr2:63839842-63888766 Sample_02_0261 Osteoblastic hFOB_differentiated 780 7 1308 90 5 122 638 UGP2
SE_02_034200643 chr2:63839890-63858328 Sample_02_0342 Liver HSPCs_F0 643 4 492 32 0 61 406 UGP2
SE_01_008100798 chr2:63839916-63877607 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 798 6 1008 76 4 75 406 UGP2
SE_02_143100388 chr2:63839921-63892165 Sample_02_1431 Blood T cell 388 7 1418 103 5 130 711 UGP2
SE_02_083500977 chr2:63840006-63858091 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 977 6 483 31 0 60 399 UGP2
SE_02_010000771 chr2:63840009-63856871 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 771 2 442 26 0 55 352 UGP2
SE_02_092300479 chr2:63840016-63888090 Sample_02_0923 Heart fetal heart_PCW10_12522 479 17 1292 90 5 121 638 UGP2
SE_02_055500236 chr2:63840039-63860938 Sample_02_0555 Other HAP1_WT 236 7 573 42 1 62 406 UGP2
SE_02_012800288 chr2:63840046-63860926 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 288 8 573 42 1 62 406 UGP2
SE_00_003601504 chr2:63840129-63844321 Sample_00_0036 Small intestine small-intestine_108days 1504 1 115 6 0 26 306 UGP2
SE_02_092200494 chr2:63840132-63877225 Sample_02_0922 Heart fetal heart_PCW10_12434 494 12 993 75 4 74 406 UGP2
SE_02_090100475 chr2:63840213-63899772 Sample_02_0901 Heart left ventricle_LV1471 475 29 1604 117 6 178 871 UGP2,VPS54
SE_02_088900795 chr2:63840216-63896056 Sample_02_0889 Heart left ventricle_LV1183 795 18 1520 110 5 161 817 UGP2,VPS54
SE_02_103400641 chr2:63840227-63857661 Sample_02_1034 Blood AML cell 641 6 460 29 0 55 352 UGP2
SE_02_092500511 chr2:63840247-63896001 Sample_02_0925 Heart fetal heart_PCW17_12570 511 12 1519 110 5 161 817 UGP2,VPS54
SE_02_088800855 chr2:63840252-63886910 Sample_02_0888 Heart left ventricle_LV1160 855 14 1243 88 5 111 582 UGP2
SE_02_046500509 chr2:63840256-63887150 Sample_02_0465 Adipose subcutaneous adipocytes 509 15 1249 88 5 111 582 UGP2
SE_02_089800846 chr2:63840283-63886640 Sample_02_0898 Heart left ventricle_LV1356 846 14 1233 88 5 111 566 UGP2
SE_02_090600962 chr2:63840287-63876686 Sample_02_0906 Heart left ventricle_DCM_LV1072 962 13 978 74 3 74 406 UGP2
SE_02_089100787 chr2:63840287-63876912 Sample_02_0891 Heart left ventricle_LV1202 787 18 982 74 3 74 406 UGP2
SE_02_089201003 chr2:63840291-63876889 Sample_02_0892 Heart left ventricle_LV1215 1003 16 982 74 3 74 406 UGP2
SE_02_089400548 chr2:63840352-63876112 Sample_02_0894 Heart left ventricle_LV1248 548 10 969 73 2 74 406 UGP2
SE_02_143500655 chr2:63840427-63863430 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 655 5 637 45 2 62 406 UGP2
SE_02_090200674 chr2:63840908-63888082 Sample_02_0902 Heart left ventricle_LV1558 674 17 1266 90 5 111 607 UGP2
SE_02_091900725 chr2:63840943-63876041 Sample_02_0919 Heart left ventricle_DCM_LV1532 725 18 947 73 2 64 366 UGP2
SE_02_156700016 chr2:63840958-63898737 Sample_02_1567 iPSCs CiPSC 16 25 1555 114 6 163 799 UGP2,VPS54
SE_02_130100177 chr2:63840975-63863678 Sample_02_1301 Blood PER-117 177 7 621 46 2 51 358 UGP2
SE_02_145700084 chr2:63841915-63853995 Sample_02_1457 Embryo HUES8 WT 84 4 295 15 0 27 89 UGP2
SE_02_092100536 chr2:63843407-63890064 Sample_02_0921 Heart embryonic heart_CS22 536 27 1253 86 5 97 345 UGP2
SE_02_090700920 chr2:63843621-63899551 Sample_02_0907 Heart left ventricle_DCM_LV1223 920 23 1497 110 6 153 548 UGP2,VPS54
SE_02_086100193 chr2:63843661-63854780 Sample_02_0861 iPSCs SAH_WT 193 7 276 16 0 22 0 UGP2
SE_02_108400442 chr2:63843717-63854804 Sample_02_1084 Blood KBM7-derived near haploid cells 442 10 273 16 0 22 0 UGP2
SE_02_074700448 chr2:63843788-63899695 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 448 40 1495 112 6 154 564 UGP2,VPS54
SE_02_074600609 chr2:63843808-63899908 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 609 29 1500 112 6 154 565 UGP2,VPS54
SE_02_068000298 chr2:63843867-63853642 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 298 14 223 13 0 16 0 UGP2
SE_02_067600194 chr2:63844095-63862992 Sample_02_0676 Embryo H1 hESC-derived neural progenitor cells_Smad_3hr 194 11 514 40 2 38 100 UGP2
SE_02_101500393 chr2:63844303-63890006 Sample_02_1015 Embryo H9_ Undifferentiated 393 11 1227 85 5 95 342 UGP2
SE_02_086000653 chr2:63844408-63851632 Sample_02_0860 iPSCs SAH_SMARCB1_K364del/+ 653 3 164 11 0 12 0 UGP2
SE_02_006700156 chr2:63844450-63854862 Sample_02_0067 Embryo AzH-G2/M 156 1 262 14 0 20 0 UGP2
SE_02_067700190 chr2:63844500-63853735 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 190 12 222 10 0 14 0 UGP2
SE_02_101600876 chr2:63844559-63875883 Sample_02_1016 Embryo H9_Mesendoderm_24h 876 10 839 64 2 48 100 UGP2
SE_02_067900440 chr2:63844576-63853231 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 440 11 201 9 0 14 0 UGP2
SE_02_116000707 chr2:63844585-63858176 Sample_02_1160 Embryo H1_shLuc 707 12 356 22 0 34 100 UGP2
SE_00_001300090 chr2:63844640-63854353 Sample_00_0013 Embryo H9 90 8 238 10 0 17 0 UGP2
SE_00_001200149 chr2:63844754-63854218 Sample_00_0012 Embryo H1-hESC 149 5 232 8 0 16 0 UGP2
SE_02_067800218 chr2:63844852-63854246 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 218 15 229 8 0 16 0 UGP2
SE_02_006600065 chr2:63845070-63854592 Sample_02_0066 Embryo AzL-S_phase 65 2 232 11 0 20 0 UGP2
SE_01_003100023 chr2:63845272-63851059 Sample_01_0031 Skin GM23338 23 1 137 7 0 11 0 UGP2
SE_00_001900197 chr2:63845552-63854835 Sample_00_0019 Dermal fibroblasts iPS-20b 197 1 236 11 0 18 0 UGP2
SE_02_006400306 chr2:63847746-63854989 Sample_02_0064 Embryo DN-Early_G1 306 1 188 10 0 13 0 UGP2
SE_02_066100953 chr2:63862017-63876874 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 953 9 390 31 2 12 0 UGP2
SE_02_074800952 chr2:63869426-63877104 Sample_02_0748 Mammary gland HCC1599_WO 952 3 197 20 2 12 0 UGP2
SE_02_057000739 chr2:63870787-63892508 Sample_02_0570 Brain LN229_10_mM_glucose 739 7 591 41 3 72 316 UGP2

Genomic distribution of SEs associated with UGP2

The strength of the tissue affected by the gene


Expression of UGP2