SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000134882
Gene: UBAC2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr13:99200774-99386504 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_144100002 chr13:99133828-99162167 Sample_02_1441 Peripheral blood peripheral blood monocyte-derived SC cells 2 9 761 70 1 13 0 DOCK9-AS2,UBAC2-AS1,DOCK9,UBAC2
SE_02_104602565 chr13:99172666-99218039 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2565 9 1224 86 3 20 698 UBAC2-AS1,UBAC2,GPR18
SE_02_008600821 chr13:99176123-99202973 Sample_02_0086 Pancreas CAPAN1 821 2 674 47 2 9 558 UBAC2,LOC100289373
SE_02_125300657 chr13:99176746-99209397 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 657 9 848 55 2 13 660 UBAC2-AS1,UBAC2,GPR18
SE_02_017600110 chr13:99177671-99239432 Sample_02_0176 Peripheral blood LOUCY 110 6 1639 100 7 33 802 UBAC2,LOC100289373,GPR18
SE_02_012400568 chr13:99179448-99203083 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 568 4 592 45 2 9 558 UBAC2,LOC100289373
SE_01_010701029 chr13:99180192-99219743 Sample_01_0107 Esophagus esophagus squamous epithelium 1029 11 1056 77 4 25 698 UBAC2-AS1,UBAC2,GPR18
SE_00_001100648 chr13:99180344-99219811 Sample_00_0011 Esophagus esophagus 648 9 1050 77 4 25 698 UBAC2,LOC100289373,GPR18
SE_02_103500488 chr13:99185913-99247427 Sample_02_1035 Mammary gland HCC70_Vehicle 488 27 1642 107 7 42 844 UBAC2-AS1,UBAC2,GPR18
SE_02_080800824 chr13:99190139-99205096 Sample_02_0808 Ovary RMG1_ARID1A KO 824 9 392 35 1 9 558 UBAC2-AS1,UBAC2
SE_02_125800736 chr13:99190403-99203872 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 736 5 358 34 1 9 558 UBAC2-AS1,UBAC2
SE_02_035400282 chr13:99191143-99203009 Sample_02_0354 Colon Colo205 282 2 315 32 1 8 558 UBAC2,LOC100289373
SE_01_008501278 chr13:99191274-99239610 Sample_01_0085 Stomach stomach 1278 6 1327 88 6 32 802 UBAC2,LOC100289373,GPR18
SE_02_035300585 chr13:99191288-99202071 Sample_02_0353 Colon HT29 585 2 294 29 0 7 558 UBAC2,LOC100289373
SE_01_007900842 chr13:99191327-99229918 Sample_01_0079 Peyers patch Peyers-patch 842 4 1061 77 6 28 698 UBAC2,LOC100289373,GPR18
SE_02_081700536 chr13:99191374-99202074 Sample_02_0817 Ovary Epithelial ovarian cancer 536 3 292 29 0 7 558 UBAC2-AS1,UBAC2
SE_02_050900435 chr13:99191393-99201433 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 435 3 281 29 0 5 527 UBAC2-AS1,UBAC2
SE_00_005600725 chr13:99191450-99238605 Sample_00_0056 Sigmoid colon sigmoid colon 3y 725 24 1305 87 6 32 794 UBAC2-AS1,UBAC2,GPR18
SE_02_051100473 chr13:99191459-99201948 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 473 4 291 29 0 7 558 UBAC2-AS1,UBAC2
SE_02_136200949 chr13:99191466-99230366 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 949 9 1073 77 6 28 698 UBAC2-AS1,UBAC2,GPR18
SE_02_136101081 chr13:99191642-99230084 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1081 9 1061 77 6 28 698 UBAC2-AS1,UBAC2,GPR18
SE_02_094800903 chr13:99191759-99202324 Sample_02_0948 Pharyng Detroit562 903 2 291 29 0 8 558 UBAC2-AS1,UBAC2
SE_02_104000477 chr13:99195036-99217962 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 477 11 669 50 2 18 698 UBAC2-AS1,UBAC2,GPR18
SE_02_143400402 chr13:99195241-99209236 Sample_02_1434 Trophoblast trophoblast stem cells 402 3 408 28 1 12 660 UBAC2-AS1,UBAC2,GPR18
SE_02_124800679 chr13:99195457-99201961 Sample_02_1248 Bladder RT4 679 2 192 16 0 7 558 UBAC2-AS1,UBAC2
SE_02_143500518 chr13:99195660-99205126 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 518 2 259 22 1 8 558 UBAC2-AS1,UBAC2
SE_02_013100485 chr13:99197038-99231539 Sample_02_0131 Lung 1015_PT 485 10 952 60 6 28 638 UBAC2,LOC100289373,GPR18
SE_00_004900518 chr13:99198203-99238581 Sample_00_0049 Small intestine small intestine 30y 518 11 1121 65 6 32 597 UBAC2-AS1,UBAC2,GPR18
SE_02_133200370 chr13:99199052-99204825 Sample_02_1332 Blood Monomac6_CTRL 370 1 154 10 1 8 367 UBAC2-AS1,UBAC2
SE_00_000800544 chr13:99199070-99230094 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 544 4 866 52 6 28 507 UBAC2,LOC100289373,GPR18
SE_02_021300335 chr13:99199098-99240294 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 335 5 1143 64 6 32 611 UBAC2,LOC100289373,GPR18
SE_02_035700052 chr13:99199101-99232161 Sample_02_0357 Colon Colo320 52 9 921 53 6 28 561 UBAC2,LOC100289373,GPR18
SE_02_033100186 chr13:99199115-99235531 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 186 5 1010 56 6 29 561 UBAC2,LOC100289373,GPR18
SE_02_133100113 chr13:99199149-99239000 Sample_02_1331 Blood Molm13_CTRL 113 8 1111 62 6 32 611 UBAC2-AS1,UBAC2,GPR18
SE_02_078100754 chr13:99199174-99239826 Sample_02_0781 Lymphoma Pfeiffer_DMSO 754 15 1125 63 6 32 611 UBAC2-AS1,UBAC2,GPR18
SE_02_013200693 chr13:99199227-99229972 Sample_02_0132 Lung 1015_CL 693 6 860 52 6 28 507 UBAC2,LOC100289373,GPR18
SE_02_012100166 chr13:99199335-99239627 Sample_02_0121 Haematopoietic and lymphoid tissue SUDHL-4 166 4 1119 63 6 32 611 UBAC2,LOC100289373,GPR18
SE_02_057700734 chr13:99199447-99203010 Sample_02_0577 Blood MOLM13_empty 734 1 102 7 1 8 367 UBAC2-AS1,UBAC2
SE_02_135000613 chr13:99199551-99238875 Sample_02_1350 Leukophereses leukophereses_p456 613 19 1094 61 6 32 611 UBAC2-AS1,UBAC2,GPR18
SE_02_090400733 chr13:99199565-99238596 Sample_02_0904 Heart left ventricle_DCM_LV1028 733 12 1088 61 6 32 601 UBAC2-AS1,UBAC2,GPR18
SE_02_139600017 chr13:99199607-99230064 Sample_02_1396 Colon COLO320HSR_DMSO 17 7 846 51 6 28 507 UBAC2-AS1,UBAC2,GPR18
SE_02_091200717 chr13:99199748-99238814 Sample_02_0912 Heart left ventricle_DCM_LV1300 717 14 1085 60 6 32 611 UBAC2-AS1,UBAC2,GPR18
SE_02_090500724 chr13:99199813-99239097 Sample_02_0905 Heart left ventricle_DCM_LV1033 724 12 1088 60 6 32 611 UBAC2-AS1,UBAC2,GPR18
SE_02_091000691 chr13:99199829-99238908 Sample_02_0910 Heart left ventricle_DCM_LV1275 691 15 1086 60 6 32 611 UBAC2-AS1,UBAC2,GPR18
SE_02_002200435 chr13:99202000-99234811 Sample_02_0022 Blood CD8donorA 435 16 899 51 6 21 194 UBAC2,LOC100289373,GPR18
SE_02_106500320 chr13:99202018-99239084 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 320 17 1021 58 6 25 244 UBAC2,UBAC2-AS1,GPR18
SE_02_090300910 chr13:99202365-99235105 Sample_02_0903 Heart left ventricle_DCM_LV1009 910 9 904 50 6 20 194 UBAC2,UBAC2-AS1,GPR18
SE_02_099800286 chr13:99202784-99239135 Sample_02_0998 Lymphoma OCI-LY1_DMSO 286 37 1006 58 6 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_002300374 chr13:99202864-99239898 Sample_02_0023 Blood CD8donorC 374 20 1022 58 6 24 244 UBAC2,LOC100289373,GPR18
SE_02_134000824 chr13:99202873-99239332 Sample_02_1340 Blood acute myeloid leukemia 824 9 1008 56 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_078200520 chr13:99203137-99239202 Sample_02_0782 Blood MEC1 520 14 1001 54 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_01_004400764 chr13:99203218-99231578 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 764 3 790 44 5 20 172 UBAC2,LOC100289373,GPR18
SE_02_090700716 chr13:99203310-99238890 Sample_02_0907 Heart left ventricle_DCM_LV1223 716 14 988 53 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_045400545 chr13:99203378-99240049 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 545 12 1013 54 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_006000438 chr13:99203397-99239323 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 438 6 992 54 5 24 244 UBAC2,LOC100289373,GPR18
SE_02_134500442 chr13:99203410-99240542 Sample_02_1345 Leukophereses leukophereses_p358 442 13 1022 55 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_045600562 chr13:99203979-99239427 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 562 7 981 54 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_139300225 chr13:99204219-99238970 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 225 10 969 53 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_082601361 chr13:99204258-99238408 Sample_02_0826 Stomach gastric tumor 1361 15 958 52 5 21 204 UBAC2,UBAC2-AS1,GPR18
SE_02_106900347 chr13:99205077-99239297 Sample_02_1069 Bone marrow Bone marrow aspirate 347 10 953 53 5 24 244 UBAC2,UBAC2-AS1,GPR18
SE_02_025500486 chr13:99208313-99238780 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 486 4 832 48 5 20 142 UBAC2,LOC100289373,GPR18
SE_02_091100939 chr13:99208967-99238794 Sample_02_0911 Heart left ventricle_DCM_LV1290 939 16 813 46 5 20 142 UBAC2,UBAC2-AS1,GPR18
SE_02_104200715 chr13:99209008-99238587 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 715 10 809 46 5 20 130 UBAC2,UBAC2-AS1,GPR18
SE_02_062200227 chr13:99209009-99240383 Sample_02_0622 Blood EOL1_Naive 227 15 850 48 5 20 142 UBAC2,UBAC2-AS1,GPR18
SE_02_139100347 chr13:99211753-99233585 Sample_02_1391 Peripheral blood FE-PD_ALK- 347 1 596 33 5 12 92 UBAC2,UBAC2-AS1,GPR18
SE_02_138800342 chr13:99211890-99238628 Sample_02_1388 Peripheral blood JB6_ALK+ 342 5 738 41 5 16 134 UBAC2,UBAC2-AS1,GPR18
SE_02_109700266 chr13:99214607-99239145 Sample_02_1097 Haematopoietic and lymphoid tissue 697 266 18 671 36 5 16 142 UBAC2,UBAC2-AS1,GPR18
SE_02_033200629 chr13:99216971-99233994 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 629 1 446 21 5 11 54 UBAC2,LOC100289373,GPR18
SE_02_025600899 chr13:99216976-99235380 Sample_02_0256 Peripheral blood MV411 899 2 481 23 5 12 54 UBAC2,LOC100289373,GPR18
SE_02_125100317 chr13:99216987-99233678 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 317 8 433 21 5 11 54 UBAC2,UBAC2-AS1,GPR18
SE_02_124900307 chr13:99217162-99238603 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 307 9 571 29 5 14 96 UBAC2,UBAC2-AS1,GPR18
SE_02_125200314 chr13:99217257-99238318 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 314 9 563 28 4 11 62 UBAC2,UBAC2-AS1,GPR18
SE_02_125000266 chr13:99217310-99232879 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 266 8 399 19 4 10 54 UBAC2,UBAC2-AS1,GPR18
SE_02_109800397 chr13:99217403-99233403 Sample_02_1098 Blood THP1_DMSO_noPMA 397 7 412 20 4 10 54 UBAC2,UBAC2-AS1,GPR18
SE_02_014400621 chr13:99217916-99233400 Sample_02_0144 Peripheral blood MV411_DMSO 621 1 399 18 4 10 54 UBAC2,LOC100289373,GPR18
SE_02_054800281 chr13:99218134-99233491 Sample_02_0548 Blood THP-1_24h with EtOH 281 1 394 17 4 9 54 UBAC2,UBAC2-AS1,GPR18
SE_02_046300305 chr13:99218440-99232422 Sample_02_0463 Blood OCI-AML3 cells 305 13 360 14 3 8 54 UBAC2,UBAC2-AS1,GPR18
SE_02_099500474 chr13:99218559-99233412 Sample_02_0995 Blood MOLM-13_empty vector 474 9 383 15 3 8 54 UBAC2,UBAC2-AS1,GPR18
SE_02_099400459 chr13:99218668-99233402 Sample_02_0994 Blood MOLM13_SIK3TQ 459 7 380 15 3 8 54 UBAC2,UBAC2-AS1,GPR18
SE_02_099300537 chr13:99218862-99233588 Sample_02_0993 Blood MOLM-13_empty 537 10 381 15 3 7 54 UBAC2,UBAC2-AS1,GPR18
SE_02_073900546 chr13:99220244-99233822 Sample_02_0739 Blood Nalm6 546 4 363 13 3 4 54 UBAC2,UBAC2-AS1,GPR18
SE_02_133200257 chr13:99221237-99233674 Sample_02_1332 Blood Monomac6_CTRL 257 1 342 12 3 3 54 UBAC2,UBAC2-AS1,GPR18
SE_02_036300328 chr13:99221588-99233261 Sample_02_0363 Haematopoietic and lymphoid tissue 697 328 2 319 12 3 3 54 UBAC2,LOC100289373,GPR18
SE_02_057300733 chr13:99223317-99232911 Sample_02_0573 Blood Nalm6_1 733 3 270 11 3 3 54 UBAC2,UBAC2-AS1,GPR18
SE_02_046400325 chr13:99225063-99231619 Sample_02_0464 Bone marrow MOLM-13 325 8 200 5 2 3 39 UBAC2,UBAC2-AS1,GPR18
Genomic distribution of SEs associated with UBAC2
Genome Browser

The strength of the tissue affected by the gene

Expression of UBAC2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)