Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000248275 |
| Gene: | TRIM52-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr5:181261169-181272307 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_04_000200968 | chr5:181322821-181351100 |
Sample_04_0002 | Blood | cold shocked K562 | 968 | 5 | 3 | 0 | 0 | 0 | 1081 | LOC100132062,TRIM52-AS1 |
| SE_04_000100681 | chr5:181322825-181351065 |
Sample_04_0001 | Blood | heat shocked K562 | 681 | 4 | 3 | 0 | 0 | 0 | 1081 | LOC100132062,TRIM52-AS1 |
| SE_02_111600676 | chr5:181324190-181350828 |
Sample_02_1116 | Haematopoietic and lymphoid tissue bone marrow | K562_native | 676 | 5 | 3 | 0 | 0 | 0 | 951 | LOC100132062,TRIM52-AS1 |
| SE_02_054500506 | chr5:181324366-181350457 |
Sample_02_0545 | Bone marrow | K562 WT | 506 | 5 | 3 | 0 | 0 | 0 | 916 | LOC100132062,TRIM52-AS1 |
| SE_02_093800821 | chr5:181408900-181425797 |
Sample_02_0938 | Retinal Pigmented Epithelial | RPE190_TnT | 821 | 3 | 3 | 0 | 0 | 0 | 181 | TRIM52-AS1 |
| SE_02_093600866 | chr5:181416225-181425935 |
Sample_02_0936 | Retinal Pigmented Epithelial | RPE188_TnT | 866 | 2 | 2 | 0 | 0 | 0 | 181 | TRIM52-AS1 |
| SE_04_000100322 | chr5:181463050-181478226 |
Sample_04_0001 | Blood | heat shocked K562 | 322 | 2 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_146600590 | chr5:181463063-181478181 |
Sample_02_1466 | Blood | HUDEP-2_BCL11AKO | 590 | 3 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_04_000200447 | chr5:181463081-181478218 |
Sample_04_0002 | Blood | cold shocked K562 | 447 | 2 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_111600778 | chr5:181463131-181478214 |
Sample_02_1116 | Haematopoietic and lymphoid tissue bone marrow | K562_native | 778 | 4 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_146700459 | chr5:181463142-181478225 |
Sample_02_1467 | Blood | HUDEP-2_LRFKO | 459 | 3 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_146800695 | chr5:181463528-181478189 |
Sample_02_1468 | Blood | HUDEP-2_WT | 695 | 3 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_054500527 | chr5:181463964-181478335 |
Sample_02_0545 | Bone marrow | K562 WT | 527 | 2 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_098801054 | chr5:181464051-181478107 |
Sample_02_0988 | Blood | K562_EPZ | 1054 | 7 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_082300111 | chr5:181470902-181478209 |
Sample_02_0823 | Haematopoietic and lymphoid tissue | SET-2_insR_GSK-LSD1 | 111 | 1 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
| SE_02_082200213 | chr5:181471275-181478173 |
Sample_02_0822 | Haematopoietic and lymphoid tissue | SET-2_insR_DMSO | 213 | 1 | 14 | 0 | 0 | 0 | 0 | TRIM52-AS1 |
Genomic distribution of SEs associated with TRIM52-AS1