Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000067167 |
| Gene: | TRAM1 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr8:70573218-70608416 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_130000290 | chr8:70571333-70617526 |
Sample_02_1300 | Blood | KARPAS-45 | 290 | 20 | 1182 | 111 | 0 | 133 | 662 | TRAM1,LACTB2-AS1 |
| SE_02_023401002 | chr8:70572646-70618162 |
Sample_02_0234 | Tonsil | Th17 | 1002 | 9 | 1161 | 110 | 0 | 133 | 662 | TRAM1 |
| SE_02_122400418 | chr8:70573650-70618274 |
Sample_02_1224 | Bone marrow | normal plasma cell | 418 | 24 | 1137 | 108 | 0 | 130 | 612 | TRAM1,LACTB2-AS1 |
| SE_02_017201215 | chr8:70574336-70617962 |
Sample_02_0172 | Lung | IMR-90_quiescent | 1215 | 7 | 1118 | 100 | 0 | 122 | 582 | TRAM1 |
| SE_02_121900043 | chr8:70586655-70626614 |
Sample_02_1219 | Bone marrow | H929 | 43 | 8 | 1002 | 88 | 0 | 116 | 460 | TRAM1,LACTB2-AS1,XKR9,LACTB2 |
| SE_02_122300107 | chr8:70588380-70626681 |
Sample_02_1223 | Bone marrow | KMS28BM | 107 | 13 | 951 | 85 | 0 | 115 | 399 | TRAM1,LACTB2-AS1,XKR9,LACTB2 |
| SE_02_056200209 | chr8:70592779-70616596 |
Sample_02_0562 | Lung | A549_Dex-treated | 209 | 7 | 599 | 57 | 0 | 72 | 399 | TRAM1,LACTB2-AS1 |
| SE_02_082601725 | chr8:70593010-70615939 |
Sample_02_0826 | Stomach | gastric tumor | 1725 | 4 | 573 | 54 | 0 | 72 | 399 | TRAM1,LACTB2-AS1 |
| SE_02_077000893 | chr8:70598642-70617446 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 893 | 13 | 479 | 48 | 0 | 44 | 295 | TRAM1,LACTB2-AS1 |
| SE_03_000800382 | chr8:70601256-70618236 |
Sample_03_0008 | Lung | A549_dexamethasone_7h | 382 | 1 | 421 | 45 | 0 | 35 | 262 | TRAM1 |
| SE_02_026100658 | chr8:70601606-70617547 |
Sample_02_0261 | Osteoblastic | hFOB_differentiated | 658 | 3 | 400 | 44 | 0 | 35 | 262 | TRAM1 |
| SE_02_026300809 | chr8:70602388-70617323 |
Sample_02_0263 | Osteoblastic | hFOB_undifferentiated | 809 | 3 | 368 | 39 | 0 | 35 | 262 | TRAM1 |
| SE_02_042900457 | chr8:70603534-70615335 |
Sample_02_0429 | Kidney | 12364284_VHL+ | 457 | 6 | 290 | 31 | 0 | 32 | 262 | TRAM1 |
| SE_03_001400437 | chr8:70603556-70617992 |
Sample_03_0014 | Lung | A549_dexamethasone_2h | 437 | 1 | 348 | 37 | 0 | 35 | 262 | TRAM1 |
| SE_03_001500410 | chr8:70603577-70618011 |
Sample_03_0015 | Lung | A549_dexamethasone_8h | 410 | 1 | 349 | 37 | 0 | 35 | 262 | TRAM1 |
| SE_03_000900452 | chr8:70603649-70617958 |
Sample_03_0009 | Lung | A549_dexamethasone_3h | 452 | 1 | 345 | 37 | 0 | 35 | 262 | TRAM1 |
| SE_03_001300627 | chr8:70603679-70618208 |
Sample_03_0013 | Lung | A549 | 627 | 1 | 349 | 38 | 0 | 35 | 262 | TRAM1 |
| SE_03_000400367 | chr8:70603681-70617863 |
Sample_03_0004 | Lung | A549_dexamethasone_4h | 367 | 1 | 342 | 37 | 0 | 35 | 262 | TRAM1 |
| SE_03_001000585 | chr8:70603913-70618013 |
Sample_03_0010 | Lung | A549_dexamethasone_1h | 585 | 1 | 339 | 36 | 0 | 34 | 262 | TRAM1 |
| SE_03_001600384 | chr8:70604021-70618156 |
Sample_03_0016 | Lung | A549_dexamethasone_6h | 384 | 1 | 339 | 37 | 0 | 34 | 262 | TRAM1 |
| SE_03_000500519 | chr8:70604045-70617926 |
Sample_03_0005 | Lung | A549_dexamethasone_0.5h | 519 | 1 | 333 | 36 | 0 | 34 | 262 | TRAM1 |
| SE_03_000700388 | chr8:70604053-70618010 |
Sample_03_0007 | Lung | A549_dexamethasone_12h | 388 | 1 | 334 | 36 | 0 | 34 | 262 | TRAM1 |
| SE_03_001100277 | chr8:70604087-70618073 |
Sample_03_0011 | Lung | A549_dexamethasone_5h | 277 | 1 | 331 | 36 | 0 | 34 | 262 | TRAM1 |
| SE_02_026200461 | chr8:70604765-70617321 |
Sample_02_0262 | Osteoblastic | hFOB_JQ1_differentiated | 461 | 2 | 297 | 35 | 0 | 34 | 262 | TRAM1 |
| SE_02_010800766 | chr8:70605545-70615965 |
Sample_02_0108 | Fallopian tube | FT246 | 766 | 2 | 231 | 24 | 0 | 31 | 262 | TRAM1 |
| SE_02_125900854 | chr8:70605694-70611286 |
Sample_02_1259 | Bone | Im-GCT-3504_G34W-repair_WT_4C7 | 854 | 2 | 132 | 18 | 0 | 24 | 262 | TRAM1,LACTB2-AS1 |
| SE_02_016700841 | chr8:70606028-70616172 |
Sample_02_0167 | Mammary gland | HCC1954_LCC2 | 841 | 3 | 228 | 23 | 0 | 31 | 262 | TRAM1 |
| SE_02_039602093 | chr8:70606119-70611202 |
Sample_02_0396 | Skin | NHEK-D | 2093 | 3 | 124 | 16 | 0 | 24 | 262 | TRAM1 |
| SE_02_027400788 | chr8:70606763-70616472 |
Sample_02_0274 | Endometriosis | hTERT_KD | 788 | 2 | 224 | 20 | 0 | 31 | 262 | TRAM1 |
| SE_02_003000378 | chr8:70608615-70616005 |
Sample_02_0030 | Kidney | human kidney proximal tubule cells | 378 | 3 | 160 | 11 | 0 | 8 | 68 | TRAM1 |
Genomic distribution of SEs associated with TRAM1