SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: TMPRSS4-AS1 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_082601679 chr11:118072028-118092103 Sample_02_0826 Stomach gastric tumor 1679 7 595 81 3 61 205 TMPRSS4,TMPRSS4-AS1
SE_02_124800533 chr11:118074115-118093780 Sample_02_1248 Bladder RT4 533 4 596 85 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_065201127 chr11:118074447-118093607 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1127 8 584 83 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_064700500 chr11:118074478-118093669 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 500 7 583 82 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_125400911 chr11:118074566-118093479 Sample_02_1254 Bladder Bladder tumor Basal1 911 4 578 82 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_064501867 chr11:118078883-118093711 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1867 7 449 63 4 40 71 TMPRSS4,TMPRSS4-AS1
SE_02_064401048 chr11:118079006-118093681 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 1048 5 447 63 4 39 71 TMPRSS4,TMPRSS4-AS1
SE_02_065700655 chr11:118079079-118093500 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 655 3 441 63 4 39 71 TMPRSS4,TMPRSS4-AS1
SE_02_046000611 chr11:118081810-118096500 Sample_02_0460 Blood ME-1_I-10-49_6h 611 3 456 69 4 37 138 TMPRSS4,TMPRSS4-AS1,SCN4B
SE_02_045900467 chr11:118082108-118096665 Sample_02_0459 Blood ME-1_DMSO_6h 467 3 456 68 4 37 138 TMPRSS4,TMPRSS4-AS1,SCN4B
Genomic distribution of SEs associated with TMPRSS4-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of TMPRSS4-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)