SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000180061
Gene: TMEM150B Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:55312801-55334048 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103500782 chr19:55291239-55347434 Sample_02_1035 Mammary gland HCC70_Vehicle 782 14 1823 146 10 196 3737 BRSK1,TMEM150B,SUV420H2,HSPBP1,MIR6803,TMEM238,TMEM190,FAM71E2,PPP6R1,MIR6805,RPL28,COX6B2,IL11
SE_02_133200478 chr19:55301236-55351219 Sample_02_1332 Blood Monomac6_CTRL 478 12 1597 123 10 178 4114 BRSK1,COX6B2,TMEM150B,SUV420H2,HSPBP1,TMEM238,TMEM190,FAM71E2,PPP6R1,MIR6805,RPL28,IL11
SE_02_023700651 chr19:55301479-55342175 Sample_02_0237 Colon V389 651 7 1261 106 9 130 2725 BRSK1,SUV420H2,TMEM150B,TMEM190,RPL28,COX6B2,PPP6R1,HSPBP1,IL11,LOC388564,FAM71E2
SE_02_024100364 chr19:55301566-55345869 Sample_02_0241 Colon V456 364 9 1418 119 10 153 3177 BRSK1,SUV420H2,TMEM150B,TMEM190,RPL28,COX6B2,PPP6R1,HSPBP1,IL11,LOC388564,FAM71E2
SE_02_047600516 chr19:55314451-55348639 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 516 7 1125 90 8 88 2183 TMEM150B,SUV420H2,HSPBP1,TMEM238,TMEM190,FAM71E2,BRSK1,MIR6805,RPL28,COX6B2,IL11
SE_02_077500756 chr19:55314948-55344544 Sample_02_0775 Pancreas EndoC-BH1_SE 756 11 952 77 8 61 1569 TMEM150B,SUV420H2,HSPBP1,TMEM238,TMEM190,FAM71E2,BRSK1,MIR6805,RPL28,COX6B2,IL11
SE_00_003601429 chr19:55319927-55334792 Sample_00_0036 Small intestine small-intestine_108days 1429 2 473 31 6 12 577 TMEM150B,TMEM190,SUV420H2,IL11,COX6B2,HSPBP1,LOC388564,FAM71E2,BRSK1
SE_00_002001450 chr19:55320065-55334901 Sample_00_0020 Large intestine large-intestine_108d 1450 3 471 32 6 11 540 TMEM150B,TMEM190,SUV420H2,IL11,COX6B2,HSPBP1,LOC388564,FAM71E2,BRSK1
SE_02_035300382 chr19:55320812-55342018 Sample_02_0353 Colon HT29 382 6 665 50 6 29 592 SUV420H2,TMEM150B,TMEM190,RPL28,IL11,COX6B2,HSPBP1,LOC388564,FAM71E2,BRSK1
SE_02_036100503 chr19:55320877-55341927 Sample_02_0361 Colon HT29_DMSO 503 4 663 50 6 27 557 SUV420H2,TMEM150B,TMEM190,RPL28,IL11,COX6B2,HSPBP1,LOC388564,FAM71E2,BRSK1
Genomic distribution of SEs associated with TMEM150B
Genome Browser

The strength of the tissue affected by the gene

Expression of TMEM150B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)