SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000188755
Gene: TBC1D3P2 Gene type: transcribed_unprocessed_pseudogene
Strand: - External links:
Genomic region: chr17:62264705-62275655 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_035400342 chr17:62159379-62189983 Sample_02_0354 Colon Colo205 342 5 803 22 2 36 0 TBC1D3P2,MED13
SE_02_023700917 chr17:62160349-62190123 Sample_02_0237 Colon V389 917 9 762 22 2 36 0 TBC1D3P2,MED13
SE_02_024100548 chr17:62160616-62189933 Sample_02_0241 Colon V456 548 7 753 22 2 36 0 TBC1D3P2,MED13
SE_00_003100801 chr17:62162679-62207805 Sample_00_0031 Placenta placenta 801 8 1237 26 3 50 0 TBC1D3P2,MED13
SE_02_023600495 chr17:62162853-62190171 Sample_02_0236 Colon V206 495 9 706 20 2 36 0 TBC1D3P2,MED13
SE_02_012400478 chr17:62163672-62199633 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 478 5 973 24 3 45 0 TBC1D3P2,MED13
SE_02_082300339 chr17:62168909-62188457 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 339 4 520 16 2 5 0 TBC1D3P2
SE_02_054500565 chr17:62169068-62188403 Sample_02_0545 Bone marrow K562 WT 565 6 515 16 2 5 0 TBC1D3P2,MED13
SE_02_082200597 chr17:62169287-62188569 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 597 3 516 16 2 5 0 TBC1D3P2,MED13
SE_02_098801083 chr17:62169624-62181420 Sample_02_0988 Blood K562_EPZ 1083 6 303 8 1 5 0 TBC1D3P2,MED13
SE_02_147500472 chr17:62178552-62221770 Sample_02_1475 Bone CHLA-25 472 11 1238 27 2 37 53 TBC1D3P2,MED13
Genomic distribution of SEs associated with TBC1D3P2
Genome Browser

The strength of the tissue affected by the gene

Expression of TBC1D3P2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)