SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000087087
Gene: SRRT Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:100875103-100888664 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_028400457 chr7:100863200-100888466 Sample_02_0284 Pelvis patient 119 457 5 864 65 4 0 2847 TRIP6,SLC12A9,SRRT,EPHB4,UFSP1,ACHE
SE_02_032400088 chr7:100864198-100879398 Sample_02_0324 Colon SW48 88 1 523 43 2 0 1620 TRIP6,SLC12A9,SRRT,EPHB4,UFSP1,ACHE
SE_02_031000596 chr7:100864729-100880175 Sample_02_0310 Neuroblastoma SJNB8 596 3 525 39 1 0 1620 TRIP6,SLC12A9,SRRT,EPHB4,UFSP1,ACHE
SE_02_034700172 chr7:100865452-100888535 Sample_02_0347 Blood AML11 172 4 795 58 3 0 2807 TRIP6,SLC12A9,SRRT,EPHB4,UFSP1,ACHE
SE_02_046300373 chr7:100870304-100887701 Sample_02_0463 Blood OCI-AML3 cells 373 8 599 42 2 0 1680 TRIP6,SRRT,ACHE,EPHB4,MIR6875,UFSP1,SLC12A9
SE_02_104301245 chr7:100870356-100887758 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1245 13 599 42 2 0 1683 TRIP6,SRRT,ACHE,EPHB4,MIR6875,UFSP1,SLC12A9
SE_02_101700639 chr7:100870643-100892687 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 639 7 749 55 4 0 2650 UFSP1,ACHE,TRIP6,SRRT,EPHB4,MIR6875,SLC12A9
SE_02_082601237 chr7:100871221-100892139 Sample_02_0826 Stomach gastric tumor 1237 6 710 50 3 0 2485 UFSP1,ACHE,TRIP6,SRRT,EPHB4,MIR6875,SLC12A9
SE_02_104801382 chr7:100871365-100887722 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1382 5 563 37 2 0 1562 TRIP6,SRRT,ACHE,EPHB4,MIR6875,UFSP1,SLC12A9
SE_02_142400312 chr7:100872429-100888597 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 312 3 568 40 2 0 1644 TRIP6,SRRT,ACHE,EPHB4,MIR6875,UFSP1,SLC12A9
SE_02_085400397 chr7:100872685-100876632 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 397 1 137 12 0 0 340 TRIP6,SRRT,ACHE,EPHB4,MIR6875,UFSP1,SLC12A9
SE_02_058400628 chr7:100873757-100883663 Sample_02_0584 Lung H1299 WT 628 6 336 18 1 0 520 SRRT,ACHE,EPHB4,MIR6875,UFSP1,SLC12A9,TRIP6
SE_02_057601127 chr7:100873978-100889718 Sample_02_0576 Blood HEL_sgLKB1e2 1127 5 555 35 3 0 1716 UFSP1,SRRT,ACHE,EPHB4,MIR6875,SLC12A9,TRIP6
Genomic distribution of SEs associated with SRRT
Genome Browser

The strength of the tissue affected by the gene

Expression of SRRT

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)