Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000144228
Gene: SPOPL Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:138501770-138573547 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_086800254 chr2:138217654-138277466 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 254 33 1552 30 3 0 0 SPOPL
SE_02_157300575 chr2:138237928-138277468 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 575 17 1037 25 3 0 0 SPOPL
SE_02_077600794 chr2:138241078-138255694 Sample_02_0776 Pancreas EndoC-BH1 794 4 369 6 1 0 0 SPOPL
SE_02_007600599 chr2:138266028-138277853 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 599 2 337 6 0 0 0 SPOPL
SE_02_127200716 chr2:138266171-138276589 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 716 9 297 5 0 0 0 SPOPL
SE_02_108400625 chr2:138271366-138279015 Sample_02_1084 Blood KBM7-derived near haploid cells 625 4 225 4 0 0 0 SPOPL
SE_02_075700987 chr2:138273255-138279024 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 987 1 159 4 0 0 0 SPOPL
SE_02_049400334 chr2:138273660-138278788 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 334 1 135 4 0 0 0 SPOPL
SE_02_004900316 chr2:138273677-138279267 Sample_02_0049 Embryo endodermal CyT49_GTtoH 316 1 154 4 0 0 0 SPOPL
SE_02_049500293 chr2:138273758-138278667 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 293 1 128 4 0 0 0 SPOPL
SE_02_075300886 chr2:138273822-138282449 Sample_02_0753 Embryo ES-derived progenitors_FG type 886 3 219 5 0 0 0 SPOPL
SE_02_049300789 chr2:138274153-138278718 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 789 2 116 4 0 0 0 SPOPL
SE_02_075401048 chr2:138274222-138278252 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 1048 1 103 4 0 0 0 SPOPL
SE_02_074400670 chr2:138274644-138278763 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 670 3 101 4 0 0 0 SPOPL
SE_02_009900672 chr2:138415432-138455048 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 672 6 935 10 1 0 0 SPOPL
SE_02_125300070 chr2:138417838-138567949 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 70 62 3855 75 5 72 428 SPOPL
SE_02_052600271 chr2:138420289-138456981 Sample_02_0526 Mammary gland MCF7 TRPS1 KO 271 16 842 16 1 0 0 SPOPL
SE_02_003801518 chr2:138445746-138456046 Sample_02_0038 Embryo DE 1518 3 255 6 1 0 0 SPOPL
SE_02_052600204 chr2:138475578-138517430 Sample_02_0526 Mammary gland MCF7 TRPS1 KO 204 18 1057 13 2 0 219 SPOPL
SE_02_077800334 chr2:138475915-138507744 Sample_02_0778 Mammary gland MCF7_FASR 334 7 802 9 1 0 219 SPOPL
SE_02_143400526 chr2:138487768-138515489 Sample_02_1434 Trophoblast trophoblast stem cells 526 6 708 11 2 0 219 SPOPL
SE_02_115800198 chr2:138487817-138515024 Sample_02_1158 Mammary gland MCF7_siYTHDC1_E2 198 5 691 10 2 0 219 SPOPL
SE_02_040400229 chr2:138488259-138545520 Sample_02_0404 Mammary gland ZR-75-1_2 229 10 1559 27 4 2 219 SPOPL
SE_02_143500619 chr2:138488548-138505215 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 619 4 433 7 1 0 219 SPOPL
SE_02_032200843 chr2:138489411-138518095 Sample_02_0322 Colon Caco-2 843 3 735 12 2 0 219 SPOPL
SE_02_066900655 chr2:138490160-138516778 Sample_02_0669 Prostate prostate cancer_DSG 655 5 678 12 2 0 219 SPOPL
SE_02_004900332 chr2:138490837-138503822 Sample_02_0049 Embryo endodermal CyT49_GTtoH 332 2 346 7 1 0 219 SPOPL
SE_02_075700601 chr2:138490863-138517073 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 601 9 666 12 2 0 219 SPOPL
SE_02_049400840 chr2:138490943-138508107 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 840 5 437 8 1 0 219 SPOPL
SE_02_075400683 chr2:138491022-138517569 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 683 6 675 12 2 0 219 SPOPL
SE_02_049300722 chr2:138491070-138509024 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 722 6 456 8 1 0 219 SPOPL
SE_02_004800508 chr2:138492886-138507863 Sample_02_0048 Embryo endodermal CyT49_HE 508 2 387 7 1 0 219 SPOPL
SE_02_153000918 chr2:138500517-138507656 Sample_02_1530 Peripheral blood neutrophils_0BA0X 918 2 184 4 1 0 219 SPOPL
SE_02_152900847 chr2:138500794-138507010 Sample_02_1529 Peripheral blood neutrophils_0BC75 847 1 158 4 1 0 219 SPOPL
SE_02_153100518 chr2:138500866-138506803 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 518 1 150 3 1 0 219 SPOPL
SE_02_142900530 chr2:138500946-138551240 Sample_02_1429 Blood GM12878_WT 530 10 1368 27 4 13 300 SPOPL

Genomic distribution of SEs associated with SPOPL

The strength of the tissue affected by the gene


Expression of SPOPL