SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000201302
Gene: SNORA65 Gene type: snoRNA
Strand: - External links:
Genomic region: chr9:127448501-127448630 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_042200489 chr9:127443799-127454081 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 489 1 295 32 2 29 937 SNORA65,LRSAM1,RPL12,ZNF79,SLC2A8
SE_02_021200111 chr9:127443808-127452928 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 111 1 264 23 1 28 937 SNORA65,LRSAM1,RPL12,ZNF79,SLC2A8
SE_02_040300337 chr9:127445681-127453708 Sample_02_0403 Mammary gland T-47D_untreat 337 1 232 24 1 29 729 SNORA65,LRSAM1,RPL12,ZNF79,SLC2A8
SE_02_003600956 chr9:127445916-127452512 Sample_02_0036 Embryo H7 956 1 195 19 0 27 729 LRSAM1,RPL12,SNORA65,ZNF79,SLC2A8
SE_02_138100677 chr9:127446270-127452323 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 677 1 181 16 0 27 685 RPL12,LRSAM1,SNORA65,SLC2A8,ZNF79
SE_02_032800425 chr9:127446732-127453271 Sample_02_0328 Embryo H9_naive 425 1 183 20 1 28 729 LRSAM1,RPL12,SNORA65,ZNF79,SLC2A8
Genomic distribution of SEs associated with SNORA65
Genome Browser

The strength of the tissue affected by the gene

Expression of SNORA65

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)