SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000239149
Gene: SNORA59A Gene type: snoRNA
Strand: + External links:
Genomic region: chr1:12507246-12507397 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900659 chr1:12330113-12486834 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 659 61 3793 92 3 665 1750 VPS13D,SNORA59A
SE_02_075400253 chr1:12355155-12382953 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 253 5 650 19 1 85 581 VPS13D,SNORA59A
SE_02_004001302 chr1:12355432-12382661 Sample_02_0040 Embryo PFG 1302 4 636 19 1 85 574 VPS13D,SNORA59A
SE_02_075700319 chr1:12355511-12383347 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 319 4 653 19 1 89 622 VPS13D,SNORA59A
SE_02_049300338 chr1:12355670-12383624 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 338 5 655 19 1 90 622 VPS13D,SNORA59A
SE_02_049500159 chr1:12355740-12383726 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 159 6 653 19 1 90 618 VPS13D,SNORA59A
SE_02_064800408 chr1:12359330-12408649 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 408 16 1192 34 1 162 653 VPS13D,SNORA59A
SE_02_055500704 chr1:12368391-12383028 Sample_02_0555 Other HAP1_WT 704 3 345 9 0 35 270 VPS13D,SNORA59A
SE_02_065200556 chr1:12368492-12389941 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 556 7 513 15 0 59 370 VPS13D,SNORA59A
SE_02_098900349 chr1:12368720-12497966 Sample_02_0989 Kidney kidney cortex_WT 349 34 3232 52 2 568 813 VPS13D,SNORA59A,MIR6730
SE_02_064700468 chr1:12368817-12410190 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 468 11 1000 27 0 133 508 VPS13D,SNORA59A
SE_02_108400155 chr1:12369300-12383157 Sample_02_1084 Blood KBM7-derived near haploid cells 155 5 325 8 0 34 244 VPS13D,SNORA59A
SE_02_065700559 chr1:12369397-12386975 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 559 6 404 9 0 53 331 VPS13D,SNORA59A
SE_02_103602436 chr1:12371369-12487601 Sample_02_1036 Mammary gland HCC70_XY018 2436 31 2862 49 2 503 692 VPS13D,SNORA59A,MIR6730
SE_02_070900904 chr1:12376536-12387501 Sample_02_0709 Pancreas hT85_organoid 904 5 246 6 0 42 230 VPS13D,SNORA59A
SE_02_051100260 chr1:12376569-12383010 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 260 2 148 5 0 21 117 VPS13D,SNORA59A
SE_02_071100607 chr1:12376606-12386981 Sample_02_0711 Pancreas hN35_organoid 607 7 231 6 0 42 230 VPS13D,SNORA59A
SE_02_067200293 chr1:12379281-12455459 Sample_02_0672 Endometrium endometrium cancer_DSG 293 22 1773 37 2 247 456 VPS13D,SNORA59A
SE_02_067400638 chr1:12379597-12413654 Sample_02_0674 Endometrium E1_FA 638 14 834 23 0 115 307 VPS13D,SNORA59A
SE_01_008700009 chr1:12379854-12566252 Sample_01_0087 Thyroid gland thyroid-gland 9 24 5057 98 6 712 1219 VPS13D,SNORA59A,DHRS3
SE_02_070800404 chr1:12379926-12387378 Sample_02_0708 Pancreas hF3 organoid 404 6 165 3 0 31 128 VPS13D,SNORA59A
SE_02_050900512 chr1:12379947-12382772 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 512 1 64 2 0 8 0 VPS13D,SNORA59A
SE_02_081800582 chr1:12380050-12417223 Sample_02_0818 Ovary High-grade serous ovarian cancer 582 15 889 23 0 126 406 VPS13D,SNORA59A
SE_02_071000507 chr1:12380077-12386954 Sample_02_0710 Pancreas hN34_organoid 507 4 145 2 0 31 128 VPS13D,SNORA59A
SE_02_064901312 chr1:12380087-12387261 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 1312 5 152 2 0 31 128 VPS13D,SNORA59A
SE_02_051200171 chr1:12380278-12382445 Sample_02_0512 Prostate LNCaP95_shARv7_DHT 171 1 40 0 0 8 0 VPS13D,SNORA59A
SE_02_081700478 chr1:12380402-12417272 Sample_02_0817 Ovary Epithelial ovarian cancer 478 16 883 23 0 125 406 VPS13D,SNORA59A
SE_02_075700011 chr1:12396141-12489020 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 11 28 2291 32 2 456 412 VPS13D,SNORA59A
SE_02_141000010 chr1:12397468-12496632 Sample_02_1410 Brain GSC6 10 21 2482 30 2 498 412 VPS13D,SNORA59A
SE_02_063300004 chr1:12397766-12496987 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 4 25 2488 31 2 505 412 VPS13D,SNORA59A
SE_02_063200003 chr1:12398683-12496520 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 3 18 2454 29 2 495 412 VPS13D,SNORA59A
SE_01_008300092 chr1:12400376-12520155 Sample_01_0083 Sigmoid colon sigmoid-colon 92 13 3048 36 3 559 1046 VPS13D,SNORA59A
SE_01_007200119 chr1:12400382-12558419 Sample_01_0072 Breast epithelium breast-epithelium 119 20 4272 67 6 656 1046 VPS13D,SNORA59A,DHRS3
SE_01_008800012 chr1:12400745-12623412 Sample_01_0088 Tibial nerve tibial-nerve 12 27 6208 132 11 878 2145 VPS13D,SNORA59A,DHRS3,AADACL4
SE_01_008600134 chr1:12400770-12520207 Sample_01_0086 Thoracic aorta thoracic-aorta 134 11 3039 36 3 559 1031 VPS13D,SNORA59A
SE_02_154700006 chr1:12401109-12485424 Sample_02_1547 Gastrointestinal Stromal GIST-48B 6 23 2061 27 2 427 352 VPS13D,SNORA59A
SE_01_007600226 chr1:12401185-12489462 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 226 6 2177 27 2 465 352 VPS13D,SNORA59A
SE_02_154800026 chr1:12401451-12481849 Sample_02_1548 Gastrointestinal Stromal GIST-226 26 25 1946 26 2 423 350 VPS13D,SNORA59A
SE_02_055000015 chr1:12401714-12489002 Sample_02_0550 Other Aska-BAF47KO1 shCt 15 17 2153 27 2 441 335 VPS13D,SNORA59A
SE_02_057000033 chr1:12401759-12458423 Sample_02_0570 Brain LN229_10_mM_glucose 33 22 1305 23 2 197 260 VPS13D,SNORA59A,MIR6730
SE_02_119500220 chr1:12402729-12482257 Sample_02_1195 Brain GBM29 220 36 1932 26 2 422 320 VPS13D,SNORA59A
SE_02_008600053 chr1:12404071-12488884 Sample_02_0086 Pancreas CAPAN1 53 7 2101 26 2 436 293 VPS13D,SNORA59A
SE_01_007000175 chr1:12404175-12513334 Sample_01_0070 Ascending aorta ascending-aorta 175 13 2782 31 2 550 968 VPS13D,SNORA59A
SE_02_055100025 chr1:12404226-12487387 Sample_02_0551 Other Aska-BAF47KO1 shSSX 25 15 2060 26 2 435 289 VPS13D,SNORA59A
SE_02_057201297 chr1:12404559-12410211 Sample_02_0572 Brain LN229_1_mM_glucose 1297 3 141 3 0 56 45 VPS13D,SNORA59A
SE_02_091300306 chr1:12404719-12497269 Sample_02_0913 Heart left ventricle_DCM_LV1304 306 24 2349 28 2 484 289 VPS13D,SNORA59A
SE_02_007400001 chr1:12404812-12486548 Sample_02_0074 Other 90-8TL_PDJQ 1 5 2012 26 2 430 289 VPS13D,SNORA59A
SE_01_007300324 chr1:12404996-12520174 Sample_01_0073 Coronary artery coronary-artery 324 14 2947 35 3 548 968 VPS13D,SNORA59A,DHRS3
SE_02_007300017 chr1:12405135-12483769 Sample_02_0073 Other 90-8TL_DMSO 17 16 1918 24 2 416 289 VPS13D,SNORA59A
SE_01_007800350 chr1:12405205-12497335 Sample_01_0078 Heart left ventricle heart-left-ventricle 350 9 2337 27 2 483 291 VPS13D,SNORA59A
SE_02_055400189 chr1:12405216-12486380 Sample_02_0554 Other Aska shSSX 189 35 1995 25 2 428 289 VPS13D,SNORA59A
SE_02_145400398 chr1:12405435-12485918 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 398 18 1971 25 2 423 289 VPS13D,SNORA59A,MIR6730
SE_02_077000089 chr1:12405446-12502408 Sample_02_0770 Ovary OVCA429_shLuc 89 54 2448 27 2 517 344 VPS13D,SNORA59A
SE_01_005600710 chr1:12405549-12479456 Sample_01_0056 Bone osteoblast 710 10 1774 24 2 400 289 VPS13D,SNORA59A
SE_02_088100049 chr1:12405731-12481935 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 49 13 1843 24 2 403 289 VPS13D,SNORA59A
SE_02_117400235 chr1:12405759-12483329 Sample_02_1174 Brain GBM02 235 31 1877 24 2 403 289 VPS13D,SNORA59A,DHRS3
SE_02_049900522 chr1:12405930-12481610 Sample_02_0499 Fetal lung IMR90 IR Senescence 522 27 1832 24 2 394 289 VPS13D,SNORA59A
SE_02_023200710 chr1:12406201-12455229 Sample_02_0232 Tonsil ILC3 710 8 1103 19 2 168 155 VPS13D,SNORA59A,DHRS3
SE_04_000200110 chr1:12406217-12479361 Sample_04_0002 Blood cold shocked K562 110 11 1744 24 2 387 289 VPS13D,SNORA59A,DHRS3
SE_02_001000381 chr1:12406457-12487619 Sample_02_0010 Kidney A-498_emptyvector 381 17 1996 25 2 416 289 VPS13D,SNORA59A
SE_02_058000238 chr1:12406930-12481960 Sample_02_0580 Blood HEL_sgSIK3e4 238 23 1802 24 2 390 289 VPS13D,SNORA59A
SE_02_103501535 chr1:12408388-12484063 Sample_02_1035 Mammary gland HCC70_Vehicle 1535 27 1833 22 2 361 289 VPS13D,SNORA59A
SE_02_022200273 chr1:12419167-12456094 Sample_02_0222 Blood DU-528 273 3 827 13 2 117 26 VPS13D,SNORA59A,DHRS3
SE_02_081600325 chr1:12421264-12482093 Sample_02_0816 Ovary Clear cell ovarian cancer 325 24 1492 16 2 344 134 VPS13D,SNORA59A,DHRS3
SE_02_026200016 chr1:12422117-12500825 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 16 8 2032 19 2 449 189 VPS13D,SNORA59A
SE_02_023100546 chr1:12422299-12455160 Sample_02_0231 Tonsil ILC1 546 9 734 11 2 113 0 VPS13D,SNORA59A,DHRS3
SE_02_090000296 chr1:12422426-12496636 Sample_02_0900 Heart left ventricle_LV1452 296 29 1904 18 2 405 134 VPS13D,SNORA59A
SE_02_010700062 chr1:12422442-12482751 Sample_02_0107 Endometrium EEC16 62 5 1484 16 2 344 134 VPS13D,SNORA59A
SE_02_088900539 chr1:12422490-12497061 Sample_02_0889 Heart left ventricle_LV1183 539 23 1919 19 2 412 134 VPS13D,SNORA59A,MIR6730
SE_02_026100041 chr1:12422573-12501055 Sample_02_0261 Osteoblastic hFOB_differentiated 41 8 2026 19 2 449 189 VPS13D,SNORA59A
SE_02_011100089 chr1:12422590-12482510 Sample_02_0111 Ovaries IOE4 89 6 1473 16 2 344 134 VPS13D,SNORA59A
SE_00_002500276 chr1:12422596-12480002 Sample_00_0025 Muscle of leg muscle-of-leg 276 6 1405 16 2 332 134 VPS13D,SNORA59A,DHRS3
SE_02_002700632 chr1:12422611-12438971 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 632 2 364 6 2 65 0 VPS13D,SNORA59A
SE_02_089200574 chr1:12422648-12496688 Sample_02_0892 Heart left ventricle_LV1215 574 21 1902 18 2 407 134 VPS13D,SNORA59A
SE_02_088000028 chr1:12422701-12481834 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 28 12 1453 16 2 343 134 VPS13D,SNORA59A
SE_02_088200042 chr1:12422734-12482005 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 42 9 1455 16 2 343 134 VPS13D,SNORA59A
SE_02_131100892 chr1:12422798-12486747 Sample_02_1311 Bone marrow HDMSCs 892 15 1598 17 2 362 134 VPS13D,SNORA59A,MIR6730
SE_02_011001045 chr1:12422808-12459303 Sample_02_0110 Ovaries IOE11 1045 4 836 13 2 124 63 VPS13D,SNORA59A,DHRS3
SE_02_096700406 chr1:12422837-12461421 Sample_02_0967 Brain H3.3K27M_JN57 406 12 888 13 2 133 134 VPS13D,SNORA59A
SE_02_086800560 chr1:12422853-12465934 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 560 26 996 13 2 187 134 VPS13D,SNORA59A,MIR6730
SE_00_003400449 chr1:12422870-12487182 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 449 14 1616 17 2 362 134 VPS13D,SNORA59A
SE_02_026300178 chr1:12422881-12486596 Sample_02_0263 Osteoblastic hFOB_undifferentiated 178 10 1590 17 2 358 134 VPS13D,SNORA59A
SE_02_089700276 chr1:12422909-12496910 Sample_02_0897 Heart left ventricle_LV1325 276 20 1907 19 2 412 134 VPS13D,SNORA59A
SE_02_024300154 chr1:12422909-12500507 Sample_02_0243 Foreskin foreskin_HFFs 154 9 2008 19 2 449 189 VPS13D,SNORA59A
SE_02_120100259 chr1:12422941-12481531 Sample_02_1201 Brain GBM37 259 17 1442 16 2 338 134 VPS13D,SNORA59A
SE_02_083100609 chr1:12422943-12437591 Sample_02_0831 Umblical vein HUVECs_TNF0min 609 5 319 6 2 61 0 VPS13D,SNORA59A
SE_02_044300207 chr1:12422944-12486692 Sample_02_0443 Bone MG63 207 33 1594 17 2 362 134 VPS13D,SNORA59A
SE_02_090500341 chr1:12422964-12481659 Sample_02_0905 Heart left ventricle_DCM_LV1033 341 14 1446 16 2 340 134 VPS13D,SNORA59A
SE_02_090800376 chr1:12422965-12497136 Sample_02_0908 Heart left ventricle_DCM_LV1262 376 29 1917 19 2 412 134 VPS13D,SNORA59A
SE_02_088300064 chr1:12422968-12481756 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 64 12 1447 16 2 340 134 VPS13D,SNORA59A
SE_02_091100456 chr1:12422982-12481285 Sample_02_0911 Heart left ventricle_DCM_LV1290 456 24 1433 16 2 338 134 VPS13D,SNORA59A
SE_02_090700505 chr1:12422985-12497164 Sample_02_0907 Heart left ventricle_DCM_LV1223 505 25 1916 19 2 412 134 VPS13D,SNORA59A
SE_02_067100101 chr1:12422998-12487011 Sample_02_0671 Mammary gland breast cancer_DSG 101 26 1608 17 2 362 134 VPS13D,SNORA59A
SE_02_131000610 chr1:12423000-12486894 Sample_02_1310 Bone marrow ASMSCs 610 13 1605 17 2 362 134 VPS13D,SNORA59A,MIR6730
SE_02_088800654 chr1:12423033-12497082 Sample_02_0888 Heart left ventricle_LV1160 654 20 1912 19 2 412 134 VPS13D,SNORA59A
SE_02_091600346 chr1:12423046-12481256 Sample_02_0916 Heart left ventricle_DCM_LV1392 346 19 1433 16 2 338 134 VPS13D,SNORA59A
SE_02_087800113 chr1:12423066-12481568 Sample_02_0878 Ovary SVOG3e cells_noDox_control 113 13 1442 16 2 338 134 VPS13D,SNORA59A
SE_02_089300273 chr1:12423066-12497170 Sample_02_0893 Heart left ventricle_LV1226 273 22 1916 19 2 412 134 VPS13D,SNORA59A
SE_01_005700048 chr1:12423074-12623839 Sample_01_0057 Pancreas duct PANC-1 48 33 5701 122 11 796 1927 VPS13D,SNORA59A,DHRS3,AADACL4
SE_02_124100021 chr1:12423081-12487249 Sample_02_1241 Skin MCC26_virus_negative 21 16 1613 17 2 362 134 VPS13D,SNORA59A,MIR6730
SE_02_087900199 chr1:12423120-12481727 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 199 11 1446 16 2 340 134 VPS13D,SNORA59A
SE_02_057200275 chr1:12423131-12458061 Sample_02_0572 Brain LN229_1_mM_glucose 275 15 804 13 2 117 63 VPS13D,SNORA59A
SE_02_126500911 chr1:12423132-12486633 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 911 12 1589 17 2 362 134 VPS13D,SNORA59A
SE_02_089600632 chr1:12423134-12497107 Sample_02_0896 Heart left ventricle_LV1294 632 21 1912 19 2 412 134 VPS13D,SNORA59A
SE_02_090900237 chr1:12423161-12497169 Sample_02_0909 Heart left ventricle_DCM_LV1264 237 27 1915 19 2 412 134 VPS13D,SNORA59A
SE_02_088700282 chr1:12423163-12496999 Sample_02_0887 Heart left ventricle_LV1121 282 21 1906 19 2 412 134 VPS13D,SNORA59A
SE_02_057100154 chr1:12423177-12460475 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 154 19 863 13 2 132 127 VPS13D,SNORA59A
SE_01_001900400 chr1:12423181-12481511 Sample_01_0019 Brain and spinal cord astrocyte 400 11 1439 16 2 338 134 VPS13D,SNORA59A
SE_02_126600384 chr1:12423213-12478900 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 384 13 1349 16 2 331 134 VPS13D,SNORA59A
SE_02_014000353 chr1:12423277-12481796 Sample_02_0140 Kidney RT242 353 13 1445 16 2 340 134 VPS13D,SNORA59A
SE_02_089100484 chr1:12423299-12496631 Sample_02_0891 Heart left ventricle_LV1202 484 23 1892 18 2 405 134 VPS13D,SNORA59A
SE_02_126300522 chr1:12423305-12482452 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 522 14 1464 16 2 344 134 VPS13D,SNORA59A
SE_02_125900273 chr1:12423310-12481714 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 273 17 1441 16 2 340 134 VPS13D,SNORA59A
SE_02_113700497 chr1:12423320-12482245 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 497 12 1457 16 2 344 134 VPS13D,SNORA59A
SE_02_055200016 chr1:12423325-12487511 Sample_02_0552 Other SYO1 shCt 16 32 1620 17 2 362 134 VPS13D,SNORA59A
SE_02_135600134 chr1:12423338-12497141 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 134 9 1911 19 2 412 134 VPS13D,SNORA59A,MIR6730
SE_02_027400167 chr1:12423350-12482415 Sample_02_0274 Endometriosis hTERT_KD 167 8 1460 16 2 344 134 VPS13D,SNORA59A,DHRS3
SE_02_090300471 chr1:12423356-12481510 Sample_02_0903 Heart left ventricle_DCM_LV1009 471 17 1434 16 2 338 134 VPS13D,SNORA59A
SE_02_018100246 chr1:12423363-12455607 Sample_02_0181 melanoma COLO679 246 6 728 12 2 113 0 VPS13D,SNORA59A
SE_02_090400800 chr1:12423383-12497023 Sample_02_0904 Heart left ventricle_DCM_LV1028 800 21 1901 19 2 412 134 VPS13D,SNORA59A
SE_02_126700583 chr1:12423387-12481809 Sample_02_1267 Bone Im-GCT-4072_G34W 583 17 1441 16 2 341 134 VPS13D,SNORA59A
SE_01_007700122 chr1:12423403-12520074 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 122 15 2514 26 3 477 813 VPS13D,SNORA59A
SE_01_007500018 chr1:12423417-12623063 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 18 25 5676 122 11 796 1927 VPS13D,SNORA59A,DHRS3,AADACL4
SE_02_094900695 chr1:12423418-12461953 Sample_02_0949 Umbilical artery HUAEC_WT 695 15 887 13 2 135 134 VPS13D,SNORA59A
SE_01_009200016 chr1:12423424-12623461 Sample_01_0092 Vagina vagina 16 34 5688 122 11 796 1927 VPS13D,SNORA59A,DHRS3,AADACL4
SE_02_157300920 chr1:12423431-12482106 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 920 20 1448 16 2 344 134 VPS13D,SNORA59A
SE_02_156900195 chr1:12423445-12481931 Sample_02_1569 Endothelial Endothelial cells 195 11 1443 16 2 343 134 VPS13D,SNORA59A
SE_02_113800613 chr1:12423467-12482148 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 613 13 1446 16 2 344 134 VPS13D,SNORA59A
SE_02_074000032 chr1:12423495-12496608 Sample_02_0740 Muscle RH3 32 22 1885 18 2 404 134 VPS13D,SNORA59A
SE_02_041900968 chr1:12423497-12465246 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 968 16 970 13 2 179 134 VPS13D,SNORA59A
SE_01_009400418 chr1:12423497-12487483 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 418 21 1616 17 2 362 134 VPS13D,SNORA59A
SE_02_120501076 chr1:12423515-12462720 Sample_02_1205 Brain NB3 1076 22 904 13 2 135 134 VPS13D,SNORA59A
SE_02_044200644 chr1:12423518-12485552 Sample_02_0442 Bone MG63.3 644 33 1551 17 2 345 134 VPS13D,SNORA59A,MIR6730
SE_02_152100156 chr1:12423524-12457594 Sample_02_1521 Skin A375 DMSO 156 7 774 13 2 117 63 VPS13D,SNORA59A,DHRS3
SE_02_089000278 chr1:12423538-12496587 Sample_02_0890 Heart left ventricle_LV1200 278 19 1884 18 2 404 134 VPS13D,SNORA59A
SE_02_089900451 chr1:12423541-12481403 Sample_02_0899 Heart left ventricle_LV1400 451 20 1426 16 2 338 134 VPS13D,SNORA59A
SE_01_007400144 chr1:12423541-12520169 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 144 11 2513 26 3 477 813 VPS13D,SNORA59A
SE_02_060500539 chr1:12423550-12486436 Sample_02_0605 Skin Skin Fibroblast_DMSO 539 17 1570 17 2 357 134 VPS13D,SNORA59A
SE_02_058600314 chr1:12423551-12494712 Sample_02_0586 Chordal patient-derived chordoma MGH_4 314 23 1835 18 2 400 134 VPS13D,SNORA59A
SE_02_061000155 chr1:12423554-12489197 Sample_02_0610 Liposarcoma MLS 1765-92 155 15 1659 17 2 365 134 VPS13D,SNORA59A
SE_02_044700117 chr1:12423566-12491905 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 117 39 1746 17 2 395 134 VPS13D,SNORA59A,MIR6730
SE_02_052500289 chr1:12423575-12485498 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 289 12 1550 17 2 345 134 VPS13D,SNORA59A
SE_02_119100708 chr1:12423582-12481595 Sample_02_1191 Brain GBM25 708 22 1432 16 2 338 134 VPS13D,SNORA59A
SE_02_061400078 chr1:12423587-12486923 Sample_02_0614 Liposarcoma MLPS_T2 78 21 1596 17 2 362 134 VPS13D,SNORA59A
SE_02_044500651 chr1:12423611-12492817 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 651 27 1773 17 2 400 134 VPS13D,SNORA59A,MIR6730
SE_02_017600817 chr1:12423613-12455458 Sample_02_0176 Peripheral blood LOUCY 817 4 721 11 2 113 0 VPS13D,SNORA59A
SE_02_091800371 chr1:12423616-12481499 Sample_02_0918 Heart left ventricle_DCM_LV1437 371 17 1429 16 2 338 134 VPS13D,SNORA59A
SE_02_135500216 chr1:12423627-12481848 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 216 9 1437 15 2 343 134 VPS13D,SNORA59A
SE_02_150100027 chr1:12423632-12496938 Sample_02_1501 Brain SHEP-21N_NOSPIKE 27 25 1895 18 2 412 134 VPS13D,SNORA59A
SE_02_042300355 chr1:12423645-12457738 Sample_02_0423 Skin A375 355 10 778 12 2 117 63 VPS13D,SNORA59A
SE_02_156800242 chr1:12423661-12481768 Sample_02_1568 Heart Cardiac progenitor cells 242 12 1434 15 2 339 134 VPS13D,SNORA59A,DHRS3
SE_02_150700037 chr1:12423668-12488321 Sample_02_1507 Brain SHEP-21N_DOX_24h 37 23 1634 16 2 361 134 VPS13D,SNORA59A
SE_02_091500485 chr1:12423680-12481256 Sample_02_0915 Heart left ventricle_DCM_LV1371 485 23 1420 15 2 337 134 VPS13D,SNORA59A
SE_02_089400363 chr1:12423721-12479084 Sample_02_0894 Heart left ventricle_LV1248 363 13 1347 15 2 331 134 VPS13D,SNORA59A
SE_02_097900721 chr1:12423819-12481711 Sample_02_0979 Brain JN14-BS1_H3.3K27M 721 15 1429 15 2 337 134 VPS13D,SNORA59A
SE_02_076700050 chr1:12423820-12502420 Sample_02_0767 Ovary OVCA429 50 53 2034 18 2 446 189 VPS13D,SNORA59A
SE_02_149700048 chr1:12423852-12488473 Sample_02_1497 Brain SHEP-21N 48 20 1637 16 2 356 134 VPS13D,SNORA59A
SE_02_149800084 chr1:12423915-12488171 Sample_02_1498 Brain SHEP-21N_DOX_2h 84 21 1630 16 2 350 134 VPS13D,SNORA59A
SE_02_090200922 chr1:12423941-12481354 Sample_02_0902 Heart left ventricle_LV1558 922 19 1417 14 2 326 134 VPS13D,SNORA59A
SE_02_064800064 chr1:12423984-12482417 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 64 17 1446 14 2 332 134 VPS13D,SNORA59A,MIR6730
SE_00_001100087 chr1:12424189-12486987 Sample_00_0011 Esophagus esophagus 87 9 1588 15 2 339 134 VPS13D,SNORA59A
SE_02_044600471 chr1:12424368-12492267 Sample_02_0446 Bone osteosarcoma tumor P2 471 23 1741 15 2 375 134 VPS13D,SNORA59A,MIR6730
SE_02_058500878 chr1:12424381-12438050 Sample_02_0585 Umbilical vein HUVEC 0hour 878 5 304 4 2 38 0 VPS13D,SNORA59A
SE_02_118100364 chr1:12424384-12482073 Sample_02_1181 Brain GBM10 364 18 1430 14 2 319 134 VPS13D,SNORA59A
SE_02_095400291 chr1:12424428-12483704 Sample_02_0954 Brain H3.3K27WT_2192 291 17 1471 14 2 320 134 VPS13D,SNORA59A
SE_00_004600533 chr1:12424444-12496877 Sample_00_0046 Heart right ventricle_34y 533 26 1878 17 2 387 134 VPS13D,SNORA59A
SE_02_052400320 chr1:12424445-12481871 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 320 21 1425 14 2 318 134 VPS13D,SNORA59A
SE_02_112500106 chr1:12424452-12461205 Sample_02_1125 Adipose visceral adipose_CS_VC06 106 18 852 11 2 108 134 VPS13D,SNORA59A
SE_02_118700753 chr1:12424474-12481490 Sample_02_1187 Brain GBM16 753 21 1413 14 2 313 134 VPS13D,SNORA59A
SE_02_044000193 chr1:12424476-12492299 Sample_02_0440 Bone LM7 193 31 1739 15 2 375 134 VPS13D,SNORA59A
SE_02_145500491 chr1:12424497-12481775 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 491 17 1418 14 2 315 134 VPS13D,SNORA59A,MIR6730
SE_02_108500249 chr1:12424556-12482143 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 249 11 1425 14 2 319 134 VPS13D,SNORA59A
SE_02_154300043 chr1:12425889-12496574 Sample_02_1543 Gastrointestinal Stromal GIST-48 43 32 1836 16 2 379 134 VPS13D,SNORA59A
SE_00_002000645 chr1:12427512-12482321 Sample_00_0020 Large intestine large-intestine_108d 645 7 1380 14 2 319 134 VPS13D,SNORA59A,DHRS3
SE_01_003900045 chr1:12427997-12512444 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 45 19 2219 20 2 452 813 VPS13D,SNORA59A,DHRS3
SE_02_012600097 chr1:12430077-12530114 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 97 16 2682 28 2 467 813 VPS13D,SNORA59A
SE_02_013200072 chr1:12430077-12530114 Sample_02_0132 Lung 1015_CL 72 15 2682 28 2 467 813 VPS13D,SNORA59A
SE_00_003800048 chr1:12430167-12526223 Sample_00_0038 Spinal cord spinal-cord_108d 48 18 2561 26 2 454 813 VPS13D,SNORA59A,DHRS3
SE_00_004300444 chr1:12430236-12495190 Sample_00_0043 Stomach stomach_96d 444 11 1717 15 1 370 134 VPS13D,SNORA59A,DHRS3
SE_02_122901128 chr1:12430311-12442052 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1128 1 296 5 1 35 0 VPS13D,SNORA59A
SE_02_045300071 chr1:12430369-12505246 Sample_02_0453 Neuroblastoma SJNB3 71 13 1975 16 1 415 189 VPS13D,SNORA59A
SE_02_018300533 chr1:12431161-12457562 Sample_02_0183 Skin SKMEL2 533 6 609 10 1 81 63 VPS13D,SNORA59A
SE_02_049301012 chr1:12431300-12435819 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 1012 3 107 3 1 23 0 VPS13D,SNORA59A,MIR6730
SE_02_113200660 chr1:12431381-12457558 Sample_02_1132 Pancreas KLM1 wt 660 8 604 10 1 81 63 VPS13D,SNORA59A
SE_02_142300003 chr1:12431472-12481454 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 3 21 1262 13 1 302 134 VPS13D,SNORA59A,DHRS3
SE_02_111600081 chr1:12431489-12481306 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 81 21 1254 13 1 302 134 VPS13D,SNORA59A,DHRS3
SE_02_106700041 chr1:12431979-12487690 Sample_02_1067 Bone SJSA-1 41 23 1448 14 1 326 134 VPS13D,SNORA59A,MIR6730
SE_02_004000237 chr1:12432202-12482623 Sample_02_0040 Embryo PFG 237 10 1275 13 1 308 134 VPS13D,SNORA59A
SE_02_112600035 chr1:12432210-12481426 Sample_02_1126 Adipose visceral adipose_CTL_H425 35 28 1240 13 1 302 134 VPS13D,SNORA59A
SE_02_012700264 chr1:12432325-12482239 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 264 7 1260 13 1 308 134 VPS13D,SNORA59A
SE_02_013100227 chr1:12432325-12482239 Sample_02_0131 Lung 1015_PT 227 7 1260 13 1 308 134 VPS13D,SNORA59A
SE_02_016600078 chr1:12432387-12489929 Sample_02_0166 Mammary gland HCC1954_Parental 78 7 1485 14 1 347 134 VPS13D,SNORA59A,DHRS3
SE_02_016700387 chr1:12432387-12489929 Sample_02_0167 Mammary gland HCC1954_LCC2 387 7 1485 14 1 347 134 VPS13D,SNORA59A,DHRS3
SE_01_008500639 chr1:12432430-12512730 Sample_01_0085 Stomach stomach 639 8 2118 19 1 441 813 VPS13D,SNORA59A,DHRS3
SE_02_006800492 chr1:12432434-12456451 Sample_02_0068 Skin A375_DMSO 492 12 549 9 1 81 63 VPS13D,SNORA59A
SE_02_138300303 chr1:12432495-12487097 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 303 34 1405 14 1 326 134 VPS13D,SNORA59A
SE_02_138100346 chr1:12432514-12486922 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 346 25 1399 14 1 326 134 VPS13D,SNORA59A
SE_01_008000091 chr1:12432529-12497492 Sample_01_0080 Prostate prostate 91 5 1720 15 0 376 144 VPS13D,SNORA59A,DHRS3
SE_02_026800486 chr1:12432540-12487619 Sample_02_0268 Kidney A-498 486 18 1422 13 0 326 134 VPS13D,SNORA59A,DHRS3
SE_02_001100307 chr1:12432543-12487480 Sample_02_0011 Kidney A-498_wtVHL 307 12 1417 13 0 326 134 VPS13D,SNORA59A,DHRS3
SE_02_116200737 chr1:12432561-12496679 Sample_02_1162 Stomach YCC11 737 23 1687 14 0 371 134 VPS13D,SNORA59A
SE_01_004400834 chr1:12432578-12451563 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 834 2 436 7 0 61 0 VPS13D,SNORA59A,DHRS3
SE_02_018000565 chr1:12432610-12455592 Sample_02_0180 melanoma CJM 565 4 524 8 0 77 0 VPS13D,SNORA59A,DHRS3
SE_02_130900875 chr1:12432642-12436619 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 875 1 85 2 0 23 0 VPS13D,SNORA59A,DHRS3
SE_01_006900324 chr1:12432662-12558201 Sample_01_0069 Adrenal gland adrenal-gland 324 16 3524 53 4 538 813 VPS13D,SNORA59A,DHRS3
SE_02_091700372 chr1:12432676-12481660 Sample_02_0917 Heart left ventricle_DCM_LV1433 372 22 1230 12 0 304 134 VPS13D,SNORA59A
SE_02_039500406 chr1:12432676-12487496 Sample_02_0395 Mammary gland BT-549 406 6 1410 13 0 326 134 VPS13D,SNORA59A
SE_00_002200619 chr1:12432679-12487258 Sample_00_0022 Lung lung_30y 619 14 1398 13 0 326 134 VPS13D,SNORA59A,DHRS3
SE_02_153900640 chr1:12432730-12482346 Sample_02_1539 Nasopharyngeal C666-1 640 13 1245 12 0 308 134 VPS13D,SNORA59A,MIR6730
SE_02_054600040 chr1:12432743-12479221 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 40 15 1150 12 0 296 134 VPS13D,SNORA59A,DHRS3
SE_00_004100127 chr1:12432745-12482472 Sample_00_0041 Stomach stomach_3y 127 10 1250 12 0 308 134 VPS13D,SNORA59A
SE_02_065200055 chr1:12432749-12482350 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 55 17 1245 12 0 308 134 VPS13D,SNORA59A,MIR6730
SE_02_043800301 chr1:12432749-12487318 Sample_02_0438 Bone HOS 301 23 1399 13 0 326 134 VPS13D,SNORA59A
SE_02_064700046 chr1:12432752-12482577 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 46 14 1253 12 0 308 134 VPS13D,SNORA59A,MIR6730
SE_02_040500143 chr1:12432753-12457496 Sample_02_0405 Mammary gland ZR-75-30_KO 143 5 563 9 0 81 63 VPS13D,SNORA59A
SE_02_036600433 chr1:12432777-12479542 Sample_02_0366 Skeletal muscle NCI0082 433 8 1162 12 0 296 134 VPS13D,SNORA59A
SE_01_010100636 chr1:12432779-12497844 Sample_01_0101 Pancreas pancreas_54y 636 24 1719 15 0 383 189 VPS13D,SNORA59A
SE_02_049100519 chr1:12432836-12487159 Sample_02_0491 Pharyng Detroit 562-Control 519 9 1393 12 0 326 134 VPS13D,SNORA59A
SE_02_129600199 chr1:12432864-12497160 Sample_02_1296 Perigastric lymph node Perigastric lymph node 199 30 1696 14 0 376 134 VPS13D,SNORA59A
SE_01_009000811 chr1:12432875-12487411 Sample_01_0090 Lung upper-lobe-of-left-lung 811 11 1404 12 0 326 134 VPS13D,SNORA59A,DHRS3
SE_02_091400513 chr1:12432884-12481390 Sample_02_0914 Heart left ventricle_DCM_LV1342 513 17 1216 11 0 302 134 VPS13D,SNORA59A,MIR6730
SE_02_077100074 chr1:12432888-12502515 Sample_02_0771 Ovary OVCA429_shGRHL2 74 41 1831 14 0 413 189 VPS13D,SNORA59A
SE_02_091900293 chr1:12432904-12497436 Sample_02_0919 Heart left ventricle_DCM_LV1532 293 21 1706 14 0 376 140 VPS13D,SNORA59A
SE_01_010400568 chr1:12432919-12497187 Sample_01_0104 Lung upper lobe of left lung 568 23 1696 14 0 376 134 VPS13D,SNORA59A,MIR6730
SE_02_075400196 chr1:12432927-12488527 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 196 11 1432 12 0 326 134 VPS13D,SNORA59A,DHRS3
SE_02_093700380 chr1:12432932-12489493 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 380 17 1456 12 0 347 134 VPS13D,SNORA59A
SE_02_000500043 chr1:12432933-12490265 Sample_02_0005 Cervical cervical-cancer_KDM5C 43 5 1473 12 0 347 134 VPS13D,SNORA59A,DHRS3
SE_00_005600315 chr1:12432979-12496434 Sample_00_0056 Sigmoid colon sigmoid colon 3y 315 34 1671 13 0 365 134 VPS13D,SNORA59A,MIR6730
SE_01_007901040 chr1:12432980-12482472 Sample_01_0079 Peyers patch Peyers-patch 1040 7 1244 11 0 308 134 VPS13D,SNORA59A,DHRS3
SE_02_053000233 chr1:12432986-12489183 Sample_02_0530 Mammary gland MCF10A 233 18 1447 12 0 329 134 VPS13D,SNORA59A
SE_02_155300579 chr1:12433014-12497322 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 579 25 1700 14 0 376 134 VPS13D,SNORA59A
SE_02_081700091 chr1:12433021-12496975 Sample_02_0817 Ovary Epithelial ovarian cancer 91 22 1684 14 0 376 134 VPS13D,SNORA59A
SE_02_076600091 chr1:12433029-12490226 Sample_02_0766 Ovary PEO1 91 21 1471 12 0 347 134 VPS13D,SNORA59A,MIR6730
SE_02_081800152 chr1:12433032-12497022 Sample_02_0818 Ovary High-grade serous ovarian cancer 152 9 1683 14 0 376 134 VPS13D,SNORA59A
SE_02_095100155 chr1:12433038-12482248 Sample_02_0951 HMSCs hMSCs 155 20 1236 11 0 308 134 VPS13D,SNORA59A
SE_02_064500622 chr1:12433051-12482015 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 622 18 1228 11 0 307 134 VPS13D,SNORA59A,MIR6730
SE_02_033600300 chr1:12433077-12455806 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 300 2 514 7 0 77 0 VPS13D,SNORA59A
SE_01_011500463 chr1:12433089-12506144 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 463 15 1919 14 0 417 189 VPS13D,SNORA59A
SE_01_010900629 chr1:12433118-12481493 Sample_01_0109 Colon transverse colon_54y 629 18 1213 11 0 302 134 VPS13D,SNORA59A
SE_02_066800007 chr1:12433160-12497629 Sample_02_0668 Prostate prostate cancer FA 7 24 1702 14 0 382 170 VPS13D,SNORA59A
SE_02_155400624 chr1:12433201-12482088 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 624 15 1224 11 0 308 134 VPS13D,SNORA59A,DHRS3
SE_01_008900440 chr1:12433206-12496986 Sample_01_0089 Transverse colon transverse-colon 440 7 1676 14 0 376 134 VPS13D,SNORA59A
SE_01_011100607 chr1:12433218-12497150 Sample_01_0111 Brain SK-N-SH 607 21 1685 14 0 376 134 VPS13D,SNORA59A
SE_02_064900253 chr1:12433261-12482271 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 253 23 1228 11 0 308 134 VPS13D,SNORA59A
SE_01_003700264 chr1:12433274-12497578 Sample_01_0037 Liver hepatocyte 264 8 1695 14 0 381 161 VPS13D,SNORA59A,DHRS3
SE_02_062900435 chr1:12433365-12492184 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 435 10 1526 12 0 361 134 VPS13D,SNORA59A
SE_02_098800078 chr1:12433422-12481603 Sample_02_0988 Blood K562_EPZ 78 16 1203 11 0 302 134 VPS13D,SNORA59A,DHRS3
SE_02_018400890 chr1:12433453-12455562 Sample_02_0184 Skin SKMEL30 890 3 491 7 0 77 0 VPS13D,SNORA59A
SE_00_000400124 chr1:12433571-12475678 Sample_00_0004 Aorta aorta 124 12 1020 10 0 230 134 VPS13D,SNORA59A
SE_02_088601466 chr1:12433600-12489336 Sample_02_0886 Skin foreskin_ p63KLF4 1466 13 1426 12 0 332 134 VPS13D,SNORA59A,DHRS3
SE_02_002400419 chr1:12433614-12479188 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 419 20 1119 11 0 286 134 VPS13D,SNORA59A
SE_02_057900370 chr1:12433681-12481559 Sample_02_0579 Blood HEL_sgNeg2 370 19 1194 11 0 289 134 VPS13D,SNORA59A
SE_02_094200081 chr1:12433744-12456650 Sample_02_0942 Brain LN229 81 9 504 7 0 68 63 VPS13D,SNORA59A
SE_02_005700135 chr1:12433895-12490422 Sample_02_0057 Mammary gland vHMEC 135 12 1450 12 0 333 134 VPS13D,SNORA59A,DHRS3
SE_02_042900252 chr1:12434127-12459150 Sample_02_0429 Kidney 12364284_VHL+ 252 9 575 8 0 73 63 VPS13D,SNORA59A,DHRS3
SE_02_082200162 chr1:12434171-12461520 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 162 7 630 8 0 84 134 VPS13D,SNORA59A
SE_02_117100054 chr1:12434326-12478916 Sample_02_1171 Blood HEL92.1.7_Drug resistant 54 20 1090 11 0 280 134 VPS13D,SNORA59A
SE_02_082000754 chr1:12434506-12450670 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 754 6 365 6 0 34 0 VPS13D,SNORA59A
SE_02_082700901 chr1:12434509-12449277 Sample_02_0827 Stomach normal gastric 901 5 337 6 0 30 0 VPS13D,SNORA59A
SE_02_117000100 chr1:12434578-12453876 Sample_02_1170 Blood HEL92.1.7 100 13 434 6 0 47 0 VPS13D,SNORA59A
SE_02_082300147 chr1:12435537-12461944 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 147 10 618 7 0 76 134 VPS13D,SNORA59A
SE_02_094300207 chr1:12437094-12461797 Sample_02_0943 Brain LNZ308 207 7 580 7 0 76 134 VPS13D,SNORA59A
SE_02_050000545 chr1:12437316-12486478 Sample_02_0500 Fetal lung IMR90_#2 545 22 1265 11 0 298 134 VPS13D,SNORA59A
SE_02_024400061 chr1:12438820-12486543 Sample_02_0244 Foreskin foreskin_D11 61 9 1229 11 0 292 134 VPS13D,SNORA59A
SE_02_054700253 chr1:12445067-12454025 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 253 5 200 2 0 34 0 VPS13D,SNORA59A
SE_02_150301117 chr1:12445213-12460513 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1117 1 362 4 0 67 130 VPS13D,SNORA59A
SE_02_003000418 chr1:12446204-12457814 Sample_02_0030 Kidney human kidney proximal tubule cells 418 6 266 4 0 47 63 VPS13D,SNORA59A,DHRS3
SE_02_008800540 chr1:12446455-12481963 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 540 11 919 7 0 273 134 VPS13D,SNORA59A
SE_02_009500165 chr1:12446466-12487481 Sample_02_0095 Mammary gland MDA-MB-468 165 6 1092 8 0 292 134 VPS13D,SNORA59A
SE_00_001500540 chr1:12446530-12486528 Sample_00_0015 Lung IMR-90 540 6 1049 8 0 287 134 VPS13D,SNORA59A
SE_02_142601011 chr1:12446566-12482190 Sample_02_1426 Shoulder fibroblast_341 1011 15 922 7 0 274 134 VPS13D,SNORA59A
SE_02_009100426 chr1:12446577-12481543 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 426 7 906 7 0 268 134 VPS13D,SNORA59A,DHRS3
SE_02_060600681 chr1:12446585-12486470 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 681 11 1046 8 0 287 134 VPS13D,SNORA59A
SE_01_002900437 chr1:12446599-12481844 Sample_01_0029 Lung fibroblast-of-lung 437 9 913 7 0 273 134 VPS13D,SNORA59A
SE_02_113300694 chr1:12446681-12480759 Sample_02_1133 Liver Hepatic stellate cells 694 10 888 7 0 263 134 VPS13D,SNORA59A,DHRS3
SE_02_063801048 chr1:12446764-12481469 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 1048 16 902 7 0 268 134 VPS13D,SNORA59A,DHRS3
SE_02_121000526 chr1:12446777-12465128 Sample_02_1210 Brain GBM17 526 8 441 4 0 109 134 VPS13D,SNORA59A
SE_02_145201173 chr1:12446860-12481509 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1173 10 902 7 0 268 134 VPS13D,SNORA59A
SE_00_003300178 chr1:12447095-12487407 Sample_00_0033 Psoas muscle psoas-muscle_3y 178 10 1077 7 0 292 134 VPS13D,SNORA59A
SE_01_010000042 chr1:12447148-12461285 Sample_01_0100 Thyroid gland thyroid gland_37y 42 3 333 3 0 63 134 VPS13D,SNORA59A
SE_02_129900096 chr1:12447437-12497267 Sample_02_1299 Liver liver 96 19 1367 8 0 342 134 VPS13D,SNORA59A
SE_02_028200335 chr1:12447497-12482337 Sample_02_0282 Lung IMR-90 335 9 905 5 0 274 134 VPS13D,SNORA59A
SE_02_067000152 chr1:12447584-12481472 Sample_02_0670 Mammary gland breast cancer FA 152 9 880 5 0 268 134 VPS13D,SNORA59A,DHRS3
SE_02_049700215 chr1:12447664-12462078 Sample_02_0497 Fetal lung IMR90_#1 215 4 337 2 0 65 134 VPS13D,SNORA59A
SE_02_136800309 chr1:12447703-12481618 Sample_02_1368 Pancreas MIA PaCa-2-untreated 309 7 881 5 0 269 134 VPS13D,SNORA59A
SE_02_129700240 chr1:12447767-12497284 Sample_02_1297 Lung lung 240 28 1359 8 0 342 134 VPS13D,SNORA59A
SE_00_003600597 chr1:12447842-12486369 Sample_00_0036 Small intestine small-intestine_108days 597 6 1017 6 0 287 134 VPS13D,SNORA59A,DHRS3
SE_00_002600661 chr1:12447942-12479568 Sample_00_0026 Muscle of trunk muscle-of-trunk 661 5 814 5 0 262 134 VPS13D,SNORA59A,DHRS3
SE_02_129800198 chr1:12447987-12481428 Sample_02_1298 Hilar lymph node Hilar lymph node 198 28 870 5 0 268 134 VPS13D,SNORA59A,DHRS3
SE_02_112200179 chr1:12448240-12461185 Sample_02_1122 Adipose visceral adipose_CS_H507 179 11 303 2 0 63 134 VPS13D,SNORA59A
SE_01_009900778 chr1:12448245-12481487 Sample_01_0099 Colon transverse colon 778 12 864 5 0 268 134 VPS13D,SNORA59A,MIR6730
SE_02_089500572 chr1:12448266-12496451 Sample_02_0895 Heart left ventricle_LV1259 572 15 1318 7 0 332 134 VPS13D,SNORA59A
SE_02_092000387 chr1:12448420-12497092 Sample_02_0920 Heart left ventricle_DCM_LV1535 387 19 1333 8 0 342 134 VPS13D,SNORA59A
SE_02_122901237 chr1:12449127-12458872 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1237 1 228 2 0 42 63 VPS13D,SNORA59A
SE_02_037200290 chr1:12449766-12492565 Sample_02_0372 Skeletal muscle RMS008 290 6 1170 6 0 315 134 VPS13D,SNORA59A
SE_02_035700032 chr1:12449938-12482484 Sample_02_0357 Colon Colo320 32 5 860 5 0 259 134 VPS13D,SNORA59A
SE_02_038100762 chr1:12449938-12497804 Sample_02_0381 Heart purified cardiomyocyte WT 762 5 1327 8 0 334 187 VPS13D,SNORA59A
SE_00_002100838 chr1:12449969-12487390 Sample_00_0021 Lung lung_3y 838 9 1015 6 0 277 134 VPS13D,SNORA59A
SE_02_032500946 chr1:12452327-12497497 Sample_02_0325 Liver hepatocytes_d1 946 6 1270 8 0 315 144 VPS13D,SNORA59A
SE_02_011400440 chr1:12453231-12488358 Sample_02_0114 Mammary gland CAL51 440 10 972 6 0 263 134 VPS13D,SNORA59A
SE_02_049200859 chr1:12453382-12487108 Sample_02_0492 Pharyng Detroit 562_LPS 859 10 927 6 0 263 134 VPS13D,SNORA59A
SE_02_152600225 chr1:12453540-12489703 Sample_02_1526 Lung PC9 DMSO 225 14 993 6 0 284 134 VPS13D,SNORA59A,DHRS3
SE_02_094800408 chr1:12453821-12487329 Sample_02_0948 Pharyng Detroit562 408 7 924 6 0 263 134 VPS13D,SNORA59A,MIR6730
SE_02_085900252 chr1:12454050-12486480 Sample_02_0859 Prostate PC3 252 6 882 6 0 258 134 VPS13D,SNORA59A
SE_02_154200418 chr1:12454185-12481517 Sample_02_1542 Gastrointestinal Stromal GIST-T1 418 8 738 5 0 239 134 VPS13D,SNORA59A
SE_02_154000303 chr1:12454355-12486641 Sample_02_1540 Nasopharyngeal HK1 303 11 883 6 0 262 134 VPS13D,SNORA59A
SE_02_063100487 chr1:12454373-12481416 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 487 8 728 5 0 238 134 VPS13D,SNORA59A
SE_02_070800211 chr1:12454385-12486175 Sample_02_0708 Pancreas hF3 organoid 211 12 868 6 0 256 134 VPS13D,SNORA59A
SE_02_018200463 chr1:12454395-12482490 Sample_02_0182 melanoma LOX-IMVI 463 5 758 5 0 244 134 VPS13D,SNORA59A,DHRS3
SE_02_127500489 chr1:12454535-12482268 Sample_02_1275 Prostate PC3_Vorinostat 489 15 752 5 0 244 134 VPS13D,SNORA59A
SE_02_064400665 chr1:12454643-12481759 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 665 9 735 5 0 240 134 VPS13D,SNORA59A,DHRS3
SE_02_127700183 chr1:12455296-12482269 Sample_02_1277 Prostate PC3_COMBO 183 20 730 5 0 231 134 VPS13D,SNORA59A,DHRS3
SE_01_005800847 chr1:12456340-12486565 Sample_01_0058 Prostate PC-3 847 4 835 5 0 241 71 VPS13D,SNORA59A,DHRS3
SE_02_076400187 chr1:12460179-12497730 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 187 8 1074 6 0 295 96 VPS13D,SNORA59A
SE_02_122900568 chr1:12460683-12478302 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 568 1 464 2 0 178 0 VPS13D,SNORA59A
SE_02_017000345 chr1:12460828-12497691 Sample_02_0170 Prostate LNCaP_R1881_DOX 345 5 1065 6 0 286 43 VPS13D,SNORA59A,DHRS3
SE_02_016900344 chr1:12460829-12498009 Sample_02_0169 Prostate LNCaP_R1881 344 5 1074 6 0 286 55 VPS13D,SNORA59A,DHRS3
SE_02_016200341 chr1:12461507-12479641 Sample_02_0162 Prostate C4-2B_vehicle_24h 341 6 498 3 0 197 0 VPS13D,SNORA59A
SE_02_067300662 chr1:12463355-12497340 Sample_02_0673 Prostate LNCAP_FA 662 8 991 6 0 277 2 VPS13D,SNORA59A,DHRS3
SE_02_150300781 chr1:12468132-12482684 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 781 1 403 3 0 138 0 VPS13D,SNORA59A
SE_01_004300338 chr1:12469460-12482614 Sample_01_0043 Blood KOPT-K1 338 1 362 2 0 137 0 VPS13D,SNORA59A
SE_02_022300232 chr1:12469598-12482754 Sample_02_0223 Haematopoietic and lymphoid tissue MOLT4_1 232 1 364 2 0 136 0 VPS13D,SNORA59A
SE_02_022200596 chr1:12469611-12482322 Sample_02_0222 Blood DU-528 596 1 351 2 0 136 0 VPS13D,SNORA59A,DHRS3
SE_01_002500314 chr1:12469638-12482731 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 314 1 363 2 0 136 0 VPS13D,SNORA59A
SE_01_011200386 chr1:12469920-12481508 Sample_01_0112 Embryonic kidney HEK293_encode 386 3 322 2 0 127 0 VPS13D,SNORA59A,MIR6730
SE_02_036200497 chr1:12469949-12482465 Sample_02_0362 Haematopoietic and lymphoid tissue REH 497 2 349 2 0 133 0 VPS13D,SNORA59A
SE_02_075800450 chr1:12470118-12482315 Sample_02_0758 Peripheral blood REH 450 7 339 2 0 131 0 VPS13D,SNORA59A
SE_02_134000492 chr1:12470971-12483000 Sample_02_1340 Blood acute myeloid leukemia 492 3 339 2 0 125 0 VPS13D,SNORA59A
SE_02_113100308 chr1:12470986-12489108 Sample_02_1131 Pancreas T3M4 wt 308 7 524 3 0 143 0 VPS13D,SNORA59A
SE_02_113200674 chr1:12471080-12489919 Sample_02_1132 Pancreas KLM1 wt 674 10 543 3 0 163 0 VPS13D,SNORA59A
SE_01_004400613 chr1:12471206-12482472 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 613 1 321 2 0 124 0 VPS13D,SNORA59A,DHRS3
SE_02_018000384 chr1:12471967-12486389 Sample_02_0180 melanoma CJM 384 5 414 3 0 136 0 VPS13D,SNORA59A,DHRS3
SE_01_010701388 chr1:12471969-12482426 Sample_01_0107 Esophagus esophagus squamous epithelium 1388 1 298 2 0 123 0 VPS13D,SNORA59A
SE_00_003101028 chr1:12472200-12512297 Sample_00_0031 Placenta placenta 1028 7 1141 8 0 256 679 VPS13D,SNORA59A
SE_02_018100312 chr1:12472202-12486489 Sample_02_0181 melanoma COLO679 312 5 411 3 0 136 0 VPS13D,SNORA59A
SE_02_067200892 chr1:12472567-12487350 Sample_02_0672 Endometrium endometrium cancer_DSG 892 8 436 3 0 133 0 VPS13D,SNORA59A
SE_02_067400769 chr1:12472578-12486879 Sample_02_0674 Endometrium E1_FA 769 11 420 3 0 133 0 VPS13D,SNORA59A,DHRS3
SE_02_152400389 chr1:12473016-12486791 Sample_02_1524 Lung H3122 DMSO 389 6 410 3 0 126 0 VPS13D,SNORA59A,DHRS3
SE_02_057100279 chr1:12473761-12489656 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 279 9 477 2 0 127 0 VPS13D,SNORA59A
SE_02_071600338 chr1:12474711-12482572 Sample_02_0716 Pancreas SUIT2_GFP 338 5 232 1 0 70 0 VPS13D,SNORA59A
SE_02_016300465 chr1:12474948-12479372 Sample_02_0163 Prostate C4-2B_SR2211_24h 465 3 126 1 0 57 0 VPS13D,SNORA59A
SE_02_018300289 chr1:12474960-12488681 Sample_02_0183 Skin SKMEL2 289 5 410 2 0 87 0 VPS13D,SNORA59A
SE_02_018400697 chr1:12474988-12486947 Sample_02_0184 Skin SKMEL30 697 4 361 2 0 87 0 VPS13D,SNORA59A
SE_02_057000289 chr1:12474997-12488679 Sample_02_0570 Brain LN229_10_mM_glucose 289 9 410 2 0 87 0 VPS13D,SNORA59A,MIR6730
SE_02_022700225 chr1:12475027-12482400 Sample_02_0227 Oesophagus TE7 225 5 218 1 0 69 0 VPS13D,SNORA59A
SE_02_050700240 chr1:12475033-12486080 Sample_02_0507 Esophagus TE7_1 240 9 326 2 0 81 0 VPS13D,SNORA59A
SE_02_137000569 chr1:12475193-12488593 Sample_02_1370 Pancreas Patu8902-untreated 569 7 403 2 0 87 0 VPS13D,SNORA59A
SE_02_065700212 chr1:12475347-12481850 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 212 5 195 1 0 67 0 VPS13D,SNORA59A,MIR6730
SE_02_123300346 chr1:12475458-12489569 Sample_02_1233 Lung PC9_miR-4497 mimic 346 8 424 2 0 107 0 VPS13D,SNORA59A,MIR6730
SE_02_057200290 chr1:12475543-12489823 Sample_02_0572 Brain LN229_1_mM_glucose 290 9 426 2 0 107 0 VPS13D,SNORA59A
SE_02_152100462 chr1:12475905-12488697 Sample_02_1521 Skin A375 DMSO 462 8 379 2 0 83 0 VPS13D,SNORA59A,DHRS3
SE_02_042300539 chr1:12476179-12487214 Sample_02_0423 Skin A375 539 4 334 2 0 83 0 VPS13D,SNORA59A
SE_02_094200060 chr1:12476801-12487884 Sample_02_0942 Brain LN229 60 5 342 2 0 79 0 VPS13D,SNORA59A
SE_02_123100382 chr1:12477023-12489438 Sample_02_1231 Lung PC9_siMED13L-1 382 7 372 2 0 98 0 VPS13D,SNORA59A,DHRS3
SE_02_040500267 chr1:12477120-12484999 Sample_02_0405 Mammary gland ZR-75-30_KO 267 4 232 1 0 61 0 VPS13D,SNORA59A
SE_02_006800286 chr1:12477171-12487239 Sample_02_0068 Skin A375_DMSO 286 4 304 2 0 78 0 VPS13D,SNORA59A
SE_02_123200371 chr1:12477387-12487301 Sample_02_1232 Lung PC9_siMED13L-2 371 5 301 2 0 78 0 VPS13D,SNORA59A,MIR6730
SE_02_127801189 chr1:12477781-12494386 Sample_02_1278 Chordoma UCH1_DMSO_48h 1189 6 512 3 0 114 0 VPS13D,SNORA59A
SE_02_013100749 chr1:12495424-12550370 Sample_02_0131 Lung 1015_PT 749 11 1571 24 2 153 679 VPS13D,SNORA59A
SE_02_093500634 chr1:12509534-12514346 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 634 2 122 1 0 3 369 VPS13D,SNORA59A
SE_02_150100097 chr1:12511189-12574860 Sample_02_1501 Brain SHEP-21N_NOSPIKE 97 22 2006 58 4 127 418 DHRS3,VPS13D,SNORA59A,MIR6730
SE_02_063300065 chr1:12517657-12558529 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 65 18 1288 31 3 97 0 SNORA59A,MIR6730
SE_02_020700083 chr1:12523213-12543266 Sample_02_0207 Stomach FU97 83 4 589 7 1 43 0 SNORA59A
SE_02_109900861 chr1:12524592-12556954 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 861 9 1031 27 3 97 0 SNORA59A,MIR6730,DHRS3
SE_02_113000331 chr1:12524990-12553621 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 331 8 891 18 1 77 0 SNORA59A,MIR6730,DHRS3
SE_02_153900863 chr1:12525115-12557143 Sample_02_1539 Nasopharyngeal C666-1 863 16 1023 28 3 95 0 SNORA59A,MIR6730
SE_02_136700709 chr1:12525138-12552883 Sample_02_1367 Pancreas Capan1-untreated 709 14 854 16 1 75 0 SNORA59A,MIR6730
SE_02_098700355 chr1:12525191-12556891 Sample_02_0987 Blood K562_Control_1 355 9 1008 26 3 95 0 SNORA59A,MIR6730,DHRS3
SE_02_149800558 chr1:12525267-12557322 Sample_02_1498 Brain SHEP-21N_DOX_2h 558 10 1034 28 3 95 0 SNORA59A,MIR6730
SE_02_149700278 chr1:12525302-12557698 Sample_02_1497 Brain SHEP-21N 278 10 1041 28 3 95 0 SNORA59A,MIR6730
SE_02_044000603 chr1:12525348-12557323 Sample_02_0440 Bone LM7 603 13 1031 28 3 95 0 SNORA59A,MIR6730
SE_02_142300141 chr1:12525578-12549827 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 141 6 730 13 1 71 0 SNORA59A,MIR6730,DHRS3
SE_02_142200149 chr1:12525676-12556482 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 149 5 977 24 3 81 0 SNORA59A,MIR6730,DHRS3
SE_02_072400341 chr1:12527347-12551905 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 341 9 752 15 1 70 0 SNORA59A,MIR6730
SE_02_075700703 chr1:12527569-12550906 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 703 4 713 13 1 69 0 SNORA59A,MIR6730
SE_02_094800719 chr1:12527675-12557082 Sample_02_0948 Pharyng Detroit562 719 7 945 28 3 90 0 SNORA59A,MIR6730
SE_02_004500743 chr1:12527689-12557230 Sample_02_0045 Embryo endodermal CyT49_ES_D7 743 6 957 28 3 90 0 SNORA59A,DHRS3
SE_02_114200369 chr1:12527802-12554001 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 369 11 818 20 1 76 0 SNORA59A,MIR6730
SE_02_050700440 chr1:12529855-12550807 Sample_02_0507 Esophagus TE7_1 440 5 642 11 1 56 0 SNORA59A,MIR6730
SE_02_018100658 chr1:12531260-12557904 Sample_02_0181 melanoma COLO679 658 4 866 26 3 74 0 SNORA59A
SE_02_043600517 chr1:12538713-12557594 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 517 4 631 24 2 70 0 SNORA59A
SE_00_003800554 chr1:12539027-12565677 Sample_00_0038 Spinal cord spinal-cord_108d 554 6 915 35 2 76 0 SNORA59A,DHRS3
SE_00_002900790 chr1:12539405-12557161 Sample_00_0029 Ovary ovary 790 11 593 24 2 70 0 SNORA59A
SE_02_006800626 chr1:12547425-12558137 Sample_02_0068 Skin A375_DMSO 626 7 394 18 2 37 0 SNORA59A
SE_02_018400822 chr1:12549163-12558028 Sample_02_0184 Skin SKMEL30 822 2 337 16 2 26 0 SNORA59A
Genomic distribution of SEs associated with SNORA59A
Genome Browser

The strength of the tissue affected by the gene

Expression of SNORA59A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)