SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: SEPT4 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_027700221 chr17:58512216-58536072 Sample_02_0277 Retina FW18 221 3 530 46 3 243 1847 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_02_027800169 chr17:58512473-58537732 Sample_02_0278 Retina FW24 169 3 553 47 3 250 1805 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_02_037300229 chr17:58513294-58539921 Sample_02_0373 Skeletal muscle RMS206 229 4 565 47 2 260 1749 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_02_039601910 chr17:58513335-58535538 Sample_02_0396 Skin NHEK-D 1910 3 497 42 2 220 1669 SEPT4,MTMR4,C17ORF47,HSF5
SE_01_007200748 chr17:58513864-58533139 Sample_01_0072 Breast epithelium breast-epithelium 748 3 430 35 2 208 1669 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_02_018400747 chr17:58513868-58536129 Sample_02_0184 Skin SKMEL30 747 3 493 43 2 222 1669 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_004000565 chr17:58514046-58539731 Sample_00_0040 Spleen spleen_30y 565 6 550 46 2 250 1749 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_003900943 chr17:58514057-58532490 Sample_00_0039 Spleen spleen_3y 943 4 414 35 2 200 1669 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_003400455 chr17:58514104-58539782 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 455 7 549 46 2 249 1749 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_002100864 chr17:58514105-58532215 Sample_00_0021 Lung lung_3y 864 4 405 34 2 198 1652 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_02_035000140 chr17:58514224-58534940 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 140 4 465 41 2 207 1659 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_002200794 chr17:58514468-58532072 Sample_00_0022 Lung lung_30y 794 4 392 33 2 185 1511 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_002500824 chr17:58514475-58539826 Sample_00_0025 Muscle of leg muscle-of-leg 824 6 539 46 2 240 1656 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_00_002600617 chr17:58514576-58540569 Sample_00_0026 Muscle of trunk muscle-of-trunk 617 5 553 47 2 249 1643 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_02_037400133 chr17:58516802-58539939 Sample_02_0374 Skeletal muscle RMS209 133 2 501 45 2 233 1499 SEPT4,MTMR4,C17ORF47,HSF5,4-SEP
SE_01_011500837 chr17:58521668-58539931 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 837 3 379 36 2 155 1102 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_118100824 chr17:58524620-58531895 Sample_02_1181 Brain GBM10 824 1 181 16 2 86 798 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_120500600 chr17:58524709-58535077 Sample_02_1205 Brain NB3 600 1 250 24 2 102 919 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_117300232 chr17:58524802-58535718 Sample_02_1173 Brain GBM01 232 1 260 24 2 108 919 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_121300377 chr17:58524814-58535845 Sample_02_1213 Brain GBM31 377 1 262 25 2 109 919 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_120400695 chr17:58524980-58531891 Sample_02_1204 Brain NB2 695 1 173 16 2 86 783 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_119600544 chr17:58525088-58534971 Sample_02_1196 Brain GBM32 544 1 240 24 2 94 890 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_120300620 chr17:58525236-58531925 Sample_02_1203 Brain NB1 620 1 169 16 2 78 751 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_121100408 chr17:58525340-58534374 Sample_02_1211 Brain GBM21 408 1 221 21 2 90 837 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_108300609 chr17:58526675-58541273 Sample_02_1083 Macula macula 609 1 314 30 2 117 790 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_108200985 chr17:58526757-58535707 Sample_02_1082 Retina retina 985 1 217 23 2 73 599 SEPT4,SEPT4-AS1,HSF5,MTMR4,C17ORF47
SE_02_037800106 chr17:58530564-58542731 Sample_02_0378 Skeletal muscle SCMC 106 1 254 21 2 76 471 SEPT4,C17ORF47,MTMR4,HSF5,4-SEP
SE_02_096100250 chr17:58530618-58539073 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 250 3 172 15 2 48 176 SEPT4-AS1,SEPT4,HSF5,MTMR4,C17ORF47
SE_02_107900367 chr17:58530779-58539806 Sample_02_1079 Muscle RMS246_PAX3-NCOA1 367 2 180 15 2 58 227 SEPT4-AS1,SEPT4,HSF5,MTMR4,C17ORF47
SE_02_107800415 chr17:58530888-58539268 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 415 3 170 15 2 57 204 SEPT4-AS1,SEPT4,HSF5,MTMR4,C17ORF47
SE_02_074000780 chr17:58532183-58541536 Sample_02_0740 Muscle RH3 780 1 185 15 0 60 212 SEPT4-AS1,SEPT4,HSF5,MTMR4,C17ORF47
SE_02_043900659 chr17:58533957-58540156 Sample_02_0439 Bone Hu09 659 4 103 10 0 49 80 SEPT4-AS1,SEPT4,HSF5,MTMR4,C17ORF47
SE_02_044100941 chr17:58534063-58539222 Sample_02_0441 Bone M112 941 2 86 8 0 37 52 SEPT4-AS1,SEPT4,HSF5,MTMR4,C17ORF47
Genomic distribution of SEs associated with SEPT4
Genome Browser

The strength of the tissue affected by the gene

Expression of SEPT4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)