SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000091490
Gene: SEL1L3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr4:25747433-25863760 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122400077 chr4:25765848-25890900 Sample_02_1224 Bone marrow normal plasma cell 77 62 3571 162 11 693 1192 SEL1L3,SMIM20
SE_02_141300562 chr4:25767464-25797582 Sample_02_1413 Muscle RH4_sgBRG1 562 11 856 33 2 115 360 SEL1L3
SE_02_074000121 chr4:25769160-25834962 Sample_02_0740 Muscle RH3 121 23 1864 65 4 323 763 SEL1L3
SE_02_116900973 chr4:25780153-25818712 Sample_02_1169 Biliary H69_TGF beta_16h_2 973 10 1125 41 2 175 455 SEL1L3
SE_02_107800253 chr4:25782587-25828123 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 253 24 1322 47 2 201 524 SEL1L3
SE_02_037000263 chr4:25783756-25819459 Sample_02_0370 Skeletal muscle RH4 263 7 1046 39 2 153 393 SEL1L3
SE_02_037800225 chr4:25784440-25829152 Sample_02_0378 Skeletal muscle SCMC 225 7 1288 42 2 182 481 SEL1L3
SE_02_074100557 chr4:25784562-25797808 Sample_02_0741 Muscle RH30 557 4 387 10 0 26 141 SEL1L3
SE_02_094300067 chr4:25786205-25816874 Sample_02_0943 Brain LNZ308 67 10 900 30 2 127 284 SEL1L3
SE_02_116600879 chr4:25786558-25819126 Sample_02_1166 Biliary H69_TGF beta_16h_1 879 10 959 35 2 141 350 SEL1L3
SE_02_143801546 chr4:25794866-25820383 Sample_02_1438 Liver LSEC 1546 9 742 29 2 121 258 SEL1L3
SE_02_088300669 chr4:25795274-25818996 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 669 3 695 27 2 118 209 SEL1L3
SE_02_123600352 chr4:25799738-25834942 Sample_02_1236 Skin MKL1_virus_positive 352 9 989 32 2 224 440 SEL1L3
SE_02_123700181 chr4:25808372-25828189 Sample_02_1237 Skin MKL2_virus_positive 181 9 564 24 1 81 196 SEL1L3
SE_02_088200896 chr4:25809990-25818703 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 896 1 254 14 0 40 66 SEL1L3
SE_02_127901622 chr4:25810126-25819471 Sample_02_1279 Bone Mesenchymal stem cells 1622 1 271 16 0 39 66 SEL1L3
SE_02_087900953 chr4:25810183-25818767 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 953 1 250 14 0 38 66 SEL1L3
SE_02_087800942 chr4:25810248-25818712 Sample_02_0878 Ovary SVOG3e cells_noDox_control 942 1 249 14 0 38 66 SEL1L3
SE_01_005601118 chr4:25810367-25819022 Sample_01_0056 Bone osteoblast 1118 3 256 14 0 38 66 SEL1L3
SE_02_088101152 chr4:25810569-25818745 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1152 1 240 13 0 36 66 SEL1L3
SE_02_088001199 chr4:25810584-25818710 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1199 2 239 13 0 36 66 SEL1L3
SE_02_113300867 chr4:25812756-25818778 Sample_02_1133 Liver Hepatic stellate cells 867 2 176 11 0 22 66 SEL1L3
SE_01_004000142 chr4:25826793-25881650 Sample_01_0040 Haematopoietic and lymphoid tissue Karpas-422 142 6 1560 62 7 370 488 SEL1L3,C4ORF52
SE_02_011700146 chr4:25826841-25881320 Sample_02_0117 Haematopoietic and lymphoid tissue KARPAS-422 146 7 1551 62 7 369 488 SEL1L3,C4ORF52
SE_02_078100178 chr4:25827414-25884361 Sample_02_0781 Lymphoma Pfeiffer_DMSO 178 19 1631 74 7 370 488 SEL1L3,SMIM20
SE_01_008500947 chr4:25833752-25876595 Sample_01_0085 Stomach stomach 947 7 1227 42 7 282 387 SEL1L3,C4ORF52
SE_02_106500176 chr4:25833880-25880881 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 176 11 1348 57 7 311 387 SEL1L3,SMIM20
SE_02_071100715 chr4:25834249-25873984 Sample_02_0711 Pancreas hN35_organoid 715 8 1141 35 7 254 387 SEL1L3,SMIM20
SE_02_067200604 chr4:25834269-25865696 Sample_02_0672 Endometrium endometrium cancer_DSG 604 10 908 20 6 207 387 SEL1L3,SMIM20
SE_02_071000717 chr4:25834684-25866435 Sample_02_0710 Pancreas hN34_organoid 717 7 921 20 6 195 387 SEL1L3,SMIM20
SE_02_130200078 chr4:25835549-25926185 Sample_02_1302 Lymphoma RL DMSO 78 26 2505 158 7 458 477 SEL1L3,SMIM20
SE_01_002000259 chr4:25838763-25881168 Sample_01_0020 Blood B-cell 259 6 1205 53 7 288 326 SEL1L3,C4ORF52
SE_02_070900760 chr4:25839096-25866578 Sample_02_0709 Pancreas hT85_organoid 760 8 781 15 6 182 326 SEL1L3,SMIM20
SE_02_115500048 chr4:25840454-25885112 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 48 5 1276 65 6 285 326 SEL1L3,SMIM20
SE_02_115200033 chr4:25841770-25884866 Sample_02_1152 Lymphoma RL_WT_gRNA1 33 8 1239 65 6 284 326 SEL1L3,SMIM20
SE_02_078300282 chr4:25841830-25885147 Sample_02_0783 Blood MEC2 282 12 1246 65 6 288 326 SEL1L3,SMIM20
SE_02_115300079 chr4:25841950-25881524 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 79 6 1128 52 6 276 326 SEL1L3,SMIM20
SE_02_130400030 chr4:25841986-25932551 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 30 27 2461 161 6 474 607 SEL1L3,SMIM20
SE_02_028800024 chr4:25842095-25881647 Sample_02_0288 Tonsil CB5_H3K27Ac 24 4 1125 52 6 276 326 SEL1L3,C4ORF52
SE_02_012100029 chr4:25842147-25885307 Sample_02_0121 Haematopoietic and lymphoid tissue SUDHL-4 29 2 1242 65 6 293 326 SEL1L3,C4ORF52
SE_01_005500040 chr4:25842149-25881885 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 40 3 1133 54 6 276 326 SEL1L3,C4ORF52
SE_01_006700043 chr4:25842232-25882639 Sample_01_0067 Peritoneal effusion: derived from metastatic site: peritoneal cavity SUDHL6 43 2 1157 60 6 276 326 SEL1L3,C4ORF52
SE_01_008400673 chr4:25842416-25881113 Sample_01_0084 Spleen spleen 673 6 1100 52 6 275 326 SEL1L3,C4ORF52
SE_01_009600033 chr4:25842526-25885154 Sample_01_0096 B-cell lymphoma DOHH2 33 6 1225 65 6 293 326 SEL1L3,SMIM20
SE_00_004101107 chr4:25842529-25874001 Sample_00_0041 Stomach stomach_3y 1107 6 897 29 6 215 326 SEL1L3,C4ORF52
SE_02_115400072 chr4:25842529-25884928 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 72 5 1215 65 6 285 326 SEL1L3,SMIM20
SE_02_002500082 chr4:25842556-25881228 Sample_02_0025 Blood CD19donorA 82 17 1098 52 6 275 326 SEL1L3,C4ORF52
SE_02_082600372 chr4:25842577-25878991 Sample_02_0826 Stomach gastric tumor 372 26 1033 44 6 247 326 SEL1L3,SMIM20
SE_02_081700338 chr4:25842580-25879409 Sample_02_0817 Ovary Epithelial ovarian cancer 338 12 1043 45 6 250 326 SEL1L3,SMIM20
SE_02_073000204 chr4:25842687-25881863 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 204 6 1114 53 6 275 326 SEL1L3,SMIM20
SE_02_011900093 chr4:25842806-25881239 Sample_02_0119 Haematopoietic and lymphoid tissue PFEIFFER 93 21 1088 52 6 274 326 SEL1L3,C4ORF52
SE_02_153300429 chr4:25842863-25881138 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 429 5 1086 52 6 274 326 SEL1L3,SMIM20
SE_02_061200553 chr4:25842954-25880053 Sample_02_0612 Liposarcoma DDLPS_T2 553 15 1051 45 6 255 326 SEL1L3,SMIM20
SE_02_151200458 chr4:25842971-25873746 Sample_02_1512 Lung Purified AT2 cells 458 7 873 28 6 202 326 SEL1L3,SMIM20
SE_00_005601159 chr4:25843144-25876463 Sample_00_0056 Sigmoid colon sigmoid colon 3y 1159 18 936 35 6 233 326 SEL1L3,SMIM20
SE_00_000500255 chr4:25843271-25880654 Sample_00_0005 Blood B-cell 255 6 1053 48 6 258 326 SEL1L3,C4ORF52
SE_02_073100227 chr4:25843356-25881782 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 227 8 1082 51 6 275 326 SEL1L3,SMIM20
SE_02_156000683 chr4:25843564-25893727 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 683 14 1401 93 6 334 326 SEL1L3,SMIM20
SE_02_045500576 chr4:25843588-25862875 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 576 5 550 12 4 105 206 SEL1L3
SE_02_078200430 chr4:25843588-25885088 Sample_02_0782 Blood MEC1 430 8 1175 64 6 275 326 SEL1L3,SMIM20
SE_00_004900472 chr4:25843589-25865603 Sample_00_0049 Small intestine small intestine 30y 472 11 616 13 5 157 326 SEL1L3,SMIM20
SE_02_103601597 chr4:25846627-25866217 Sample_02_1036 Mammary gland HCC70_XY018 1597 4 560 11 5 148 326 SEL1L3,SMIM20
SE_02_082700430 chr4:25850948-25876633 Sample_02_0827 Stomach normal gastric 430 7 687 31 5 204 240 SEL1L3,SMIM20
SE_02_021300391 chr4:25851883-25881403 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 391 3 794 47 5 242 240 SEL1L3,C4ORF52
SE_02_099900456 chr4:25854471-25885066 Sample_02_0999 Lymphoma OCI-LY1_966 456 11 832 57 3 247 240 SEL1L3,SMIM20
SE_02_122500379 chr4:25854545-25879626 Sample_02_1225 Bone marrow RAJI 379 13 671 38 3 216 240 SEL1L3,SMIM20
SE_02_075000680 chr4:25854933-25881254 Sample_02_0750 Lymphoma Rec-1_GSI 680 8 702 43 3 237 240 SEL1L3,SMIM20
SE_02_075100719 chr4:25855104-25880753 Sample_02_0751 Lymphoma Rec-1_WO 719 8 685 41 3 221 240 SEL1L3,SMIM20
SE_02_057800648 chr4:25855400-25885263 Sample_02_0578 Blood MOLM-13_sgSIK3e4 648 8 816 56 3 237 240 SEL1L3,SMIM20
SE_02_121800080 chr4:25856287-25884803 Sample_02_1218 Bone marrow Daudi 80 9 780 55 3 228 240 SEL1L3,SMIM20
SE_02_025600680 chr4:25856850-25887230 Sample_02_0256 Peripheral blood MV411 680 4 836 65 3 239 240 SEL1L3,C4ORF52
SE_02_057400517 chr4:25857008-25885682 Sample_02_0574 Blood MOLM-13_sgNeg2 517 5 791 58 3 233 240 SEL1L3,SMIM20
SE_02_123900250 chr4:25857753-25891323 Sample_02_1239 Skin Waga_virus_positive 250 17 932 78 3 258 240 SEL1L3,SMIM20
SE_02_012000323 chr4:25859054-25881684 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 323 3 613 42 3 204 240 SEL1L3,C4ORF52
SE_02_115600095 chr4:25859103-25884144 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 95 17 692 55 3 204 240 SEL1L3,SMIM20
SE_01_005300576 chr4:25859117-25883723 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 576 4 680 55 3 204 240 SEL1L3,C4ORF52
SE_02_115700145 chr4:25859165-25884239 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 145 20 694 55 3 204 240 SEL1L3,SMIM20
SE_02_073600159 chr4:25859200-25885222 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 159 12 722 55 3 221 240 SEL1L3,SMIM20
SE_02_011800267 chr4:25859252-25881351 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 267 3 606 42 3 203 240 SEL1L3,C4ORF52
SE_02_038700310 chr4:25859289-25879547 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 310 21 548 35 3 182 240 SEL1L3,C4ORF52
SE_02_099800513 chr4:25859366-25885100 Sample_02_0998 Lymphoma OCI-LY1_DMSO 513 18 711 55 3 207 240 SEL1L3,SMIM20
SE_02_072900187 chr4:25859418-25881765 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 187 6 606 42 3 196 240 SEL1L3,SMIM20
SE_02_072800194 chr4:25859418-25882322 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 194 5 627 47 3 196 240 SEL1L3,SMIM20
SE_02_123700753 chr4:25859474-25890821 Sample_02_1237 Skin MKL2_virus_positive 753 11 863 78 3 242 240 SEL1L3,SMIM20
SE_02_014400526 chr4:25859520-25885811 Sample_02_0144 Peripheral blood MV411_DMSO 526 2 728 58 3 213 240 SEL1L3,C4ORF52
SE_02_025500378 chr4:25859679-25885597 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 378 3 724 58 3 213 240 SEL1L3,C4ORF52
SE_02_123600327 chr4:25859767-25888837 Sample_02_1236 Skin MKL1_virus_positive 327 10 802 70 2 220 240 SEL1L3,SMIM20
SE_02_073300244 chr4:25859825-25881967 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 244 2 605 45 2 195 240 SEL1L3,SMIM20
SE_02_073200221 chr4:25859912-25885110 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 221 4 698 55 2 200 240 SEL1L3,SMIM20
SE_01_005400355 chr4:25860804-25881923 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 355 2 574 44 2 190 240 SEL1L3,C4ORF52
SE_02_099400574 chr4:25874721-25885628 Sample_02_0994 Blood MOLM13_SIK3TQ 574 7 317 38 0 67 0 SMIM20,SEL1L3
SE_02_062200602 chr4:25876429-25885543 Sample_02_0622 Blood EOL1_Naive 602 5 275 32 0 59 0 SMIM20,SEL1L3
SE_02_099300813 chr4:25876448-25885373 Sample_02_0993 Blood MOLM-13_empty 813 7 270 29 0 59 0 SMIM20,SEL1L3
SE_02_099500869 chr4:25876669-25885230 Sample_02_0995 Blood MOLM-13_empty vector 869 5 258 29 0 56 0 SMIM20,SEL1L3
Genomic distribution of SEs associated with SEL1L3
Genome Browser

The strength of the tissue affected by the gene

Expression of SEL1L3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)