Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000136546
Gene: SCN7A Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:166403573-166611482 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_138900418 chr2:166458073-166471909 Sample_02_1389 Peripheral blood SUP-M2_ALK+ 418 2 325 22 1 20 135 SCN7A,SCN9A
SE_02_003900934 chr2:166607728-166616300 Sample_02_0039 Embryo AFG 934 2 302 1 0 1 0 SCN7A
SE_02_075700233 chr2:166607821-166633594 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 233 4 741 3 1 1 0 SCN7A
SE_02_075300478 chr2:166607842-166629199 Sample_02_0753 Embryo ES-derived progenitors_FG type 478 4 630 3 1 1 0 SCN7A,SCN9A
SE_02_004400603 chr2:166607920-166615371 Sample_02_0044 Embryo endodermal CyT49_ES_D5 603 6 267 1 0 1 0 SCN7A,SCN9A
SE_02_049300551 chr2:166608428-166616010 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 551 4 273 1 0 0 0 SCN7A,SCN9A
SE_02_075400210 chr2:166608504-166634792 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 210 4 762 3 1 7 0 SCN7A
SE_02_082500371 chr2:166628391-166682327 Sample_02_0825 Stomach SNU484 371 17 1485 61 2 60 0 SCN7A

Genomic distribution of SEs associated with SCN7A

The strength of the tissue affected by the gene


Expression of SCN7A