SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000101347
Gene: SAMHD1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr20:36890229-36951843 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104300048 chr20:36886285-37092691 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 48 149 5137 312 3 180 2350 SAMHD1,RBL1,TLDC2,SOGA1
SE_02_134500084 chr20:36914070-37015842 Sample_02_1345 Leukophereses leukophereses_p358 84 38 2686 192 2 48 913 SAMHD1,RBL1,TLDC2
SE_02_103602075 chr20:36918513-36955922 Sample_02_1036 Mammary gland HCC70_XY018 2075 14 919 63 0 22 413 SAMHD1,TLDC2
SE_02_023400225 chr20:36919416-37093405 Sample_02_0234 Tonsil Th17 225 35 4345 271 3 131 1491 SAMHD1,RBL1,C20ORF118
SE_01_008800143 chr20:36919776-36972410 Sample_01_0088 Tibial nerve tibial-nerve 143 5 1388 106 1 21 380 SAMHD1,C20ORF118
SE_02_046600462 chr20:36920411-36955556 Sample_02_0466 Adipose visceral adipocytes 462 27 871 61 0 20 380 SAMHD1,TLDC2
SE_02_104000040 chr20:36920832-37044644 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 40 57 3183 218 2 74 1108 SAMHD1,RBL1,TLDC2
SE_02_104500142 chr20:36920875-36981550 Sample_02_1045 Peripheral blood CD4+ CD7- cells_CTCL992 142 29 1622 137 1 20 380 SAMHD1,TLDC2
SE_02_010100271 chr20:36923197-36971106 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 271 9 1269 97 1 20 380 SAMHD1,C20ORF118
SE_01_007400443 chr20:36923722-36959880 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 443 6 928 62 0 20 380 SAMHD1,C20ORF118
SE_02_081600153 chr20:36923952-37016068 Sample_02_0816 Ovary Clear cell ovarian cancer 153 31 2457 175 2 30 825 SAMHD1,RBL1,TLDC2
SE_02_082600296 chr20:36924290-36961756 Sample_02_0826 Stomach gastric tumor 296 17 957 64 0 20 380 SAMHD1,TLDC2
SE_02_135000057 chr20:36926852-37016639 Sample_02_1350 Leukophereses leukophereses_p456 57 30 2389 171 2 30 825 SAMHD1,RBL1
SE_01_008401413 chr20:36927508-36989657 Sample_01_0084 Spleen spleen 1413 14 1665 132 1 18 337 SAMHD1
SE_02_099400672 chr20:36928536-36969960 Sample_02_0994 Blood MOLM13_SIK3TQ 672 17 1106 85 1 18 337 SAMHD1
SE_00_000700144 chr20:36928704-37017795 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 144 13 2364 167 2 28 782 SAMHD1,RBL1
SE_02_002600146 chr20:36929029-36955450 Sample_02_0026 Blood CD4donorE 146 10 647 41 0 18 337 SAMHD1
SE_02_099300914 chr20:36929116-36970050 Sample_02_0993 Blood MOLM-13_empty 914 16 1090 85 1 18 337 SAMHD1
SE_02_002300278 chr20:36929128-36955551 Sample_02_0023 Blood CD8donorC 278 20 648 41 0 18 337 SAMHD1
SE_02_014800079 chr20:36929132-36952282 Sample_02_0148 Blood CD8_T_cells 79 5 583 38 0 17 337 SAMHD1
SE_02_059100232 chr20:36929274-36952207 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 232 9 579 38 0 17 337 SAMHD1
SE_00_005600580 chr20:36929280-36975700 Sample_00_0056 Sigmoid colon sigmoid colon 3y 580 29 1237 90 1 18 337 SAMHD1
SE_02_062200128 chr20:36929392-36971352 Sample_02_0622 Blood EOL1_Naive 128 28 1120 86 1 18 337 SAMHD1
SE_01_008501029 chr20:36930021-36956297 Sample_01_0085 Stomach stomach 1029 3 641 42 0 17 337 SAMHD1
SE_01_010700987 chr20:36930133-36955250 Sample_01_0107 Esophagus esophagus squamous epithelium 987 7 616 38 0 17 337 SAMHD1
SE_01_010901060 chr20:36930134-36955205 Sample_01_0109 Colon transverse colon_54y 1060 17 616 38 0 17 337 SAMHD1
SE_01_010100981 chr20:36930143-36956057 Sample_01_0101 Pancreas pancreas_54y 981 11 633 39 0 17 337 SAMHD1
SE_02_010200499 chr20:36930143-36970633 Sample_02_0102 Peripheral blood Macrophages_GM-CSF_72h_IL4 499 8 1085 83 1 17 337 SAMHD1
SE_02_104800224 chr20:36930154-37016244 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 224 28 2293 163 2 27 782 SAMHD1,RBL1
SE_02_104200560 chr20:36930201-36955278 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 560 8 614 38 0 17 337 SAMHD1
SE_01_009900759 chr20:36930228-36955201 Sample_01_0099 Colon transverse colon 759 12 611 38 0 17 337 SAMHD1
SE_02_059300277 chr20:36930244-36952065 Sample_02_0593 Fetal spleenocytes fetal naive T cells 277 9 547 35 0 16 337 SAMHD1
SE_02_112800216 chr20:36930394-36955309 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 216 19 606 38 0 17 337 SAMHD1
SE_02_134800195 chr20:36930614-36975674 Sample_02_1348 Leukophereses leukophereses_p408 195 11 1196 86 1 17 335 SAMHD1
SE_01_008300401 chr20:36930795-36960130 Sample_01_0083 Sigmoid colon sigmoid-colon 401 4 742 48 0 16 330 SAMHD1
SE_02_118500621 chr20:36931053-36970136 Sample_02_1185 Brain GBM14 621 9 1038 80 1 15 307 SAMHD1
SE_02_134700342 chr20:36931266-36969747 Sample_02_1347 Leukophereses leukophereses_p401 342 10 1028 80 1 15 307 SAMHD1
SE_01_010401010 chr20:36931282-36969595 Sample_01_0104 Lung upper lobe of left lung 1010 14 1022 79 1 15 307 SAMHD1
SE_02_133200448 chr20:36931311-36977428 Sample_02_1332 Blood Monomac6_CTRL 448 12 1230 89 1 15 307 SAMHD1
SE_02_059200170 chr20:36931335-36952097 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 170 9 523 33 0 14 307 SAMHD1
SE_00_004700342 chr20:36931371-36952364 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 342 7 524 33 0 14 307 SAMHD1
SE_01_010300537 chr20:36931384-36957911 Sample_01_0103 Pancreas pancreas_37y 537 14 656 43 0 15 307 SAMHD1
SE_02_112900422 chr20:36931419-36951802 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 422 20 517 33 0 14 260 SAMHD1
SE_02_103900214 chr20:36931460-36982483 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 214 9 1375 116 1 15 307 SAMHD1
SE_02_002200386 chr20:36932912-36955654 Sample_02_0022 Blood CD8donorA 386 10 558 33 0 15 307 SAMHD1
SE_01_007700617 chr20:36934662-36959704 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 617 6 641 39 0 12 307 SAMHD1
SE_02_082700376 chr20:36939999-36954333 Sample_02_0827 Stomach normal gastric 376 5 361 19 0 7 251 SAMHD1
SE_00_000800597 chr20:36940387-36952628 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 597 2 319 18 0 7 251 SAMHD1
SE_02_146001088 chr20:36943638-36969972 Sample_02_1460 Blood Mutz-3 1088 4 724 56 1 6 224 SAMHD1
SE_02_084100126 chr20:36943661-37013138 Sample_02_0841 Blood THP-1_untr 126 23 1869 131 2 16 669 SAMHD1,RBL1
SE_02_104602914 chr20:36944603-37006815 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2914 9 1694 119 1 10 624 SAMHD1,RBL1
SE_02_149400365 chr20:36944920-36970234 Sample_02_1494 Other monocyte-derived dendritic cells_0h 365 8 698 54 1 6 224 SAMHD1
SE_02_065000783 chr20:36946391-36952382 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 783 3 146 5 0 5 224 SAMHD1
SE_02_131200420 chr20:36946876-36970091 Sample_02_1312 Brain hMGLs_WT 420 12 642 52 1 6 204 SAMHD1
SE_02_061500663 chr20:36947174-36952472 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 663 2 133 5 0 5 195 SAMHD1
SE_02_131300516 chr20:36947640-36970169 Sample_02_1313 Brain hMGLs_CD33_SNP 516 10 629 52 1 6 195 SAMHD1
SE_02_133000186 chr20:36948211-37015200 Sample_02_1330 Blood AMU-AML1 186 25 1819 130 2 16 640 SAMHD1,RBL1
SE_02_131500618 chr20:36948218-36970189 Sample_02_1315 Brain hMGLs_INPP5D SNP 618 6 624 52 1 6 195 SAMHD1
SE_02_131600485 chr20:36948304-36970767 Sample_02_1316 Brain hMGLs_TREM2-R47H 485 10 634 53 1 6 195 SAMHD1
SE_02_046300458 chr20:36948429-36959091 Sample_02_0463 Blood OCI-AML3 cells 458 5 271 16 0 6 195 SAMHD1
SE_02_093001566 chr20:36948471-36970225 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1566 10 616 52 1 6 195 SAMHD1
SE_02_131400592 chr20:36948636-36970207 Sample_02_1314 Brain hMGLs_TREM2-KO 592 10 609 52 1 6 195 SAMHD1
SE_02_046100551 chr20:36948907-36969869 Sample_02_0461 Blood MV-4-11-B cells 551 5 588 52 1 6 195 SAMHD1
SE_02_054800082 chr20:36948907-37010244 Sample_02_0548 Blood THP-1_24h with EtOH 82 12 1651 122 2 16 640 SAMHD1,RBL1
SE_02_131700446 chr20:36949061-36970122 Sample_02_1317 Brain hMGLs_SORL1-KO 446 8 590 52 1 6 195 SAMHD1
SE_02_131800471 chr20:36949136-36970128 Sample_02_1318 Brain hMGLs_SORL1-A528T 471 9 585 52 1 6 195 SAMHD1
SE_02_036300559 chr20:36964130-36990555 Sample_02_0363 Haematopoietic and lymphoid tissue 697 559 5 733 64 0 0 0 SAMHD1
SE_02_088500230 chr20:36964365-37010044 Sample_02_0885 Blood NALM6_2 230 11 1218 81 1 10 445 RBL1,SAMHD1,RPN2,MROH8
SE_02_124900180 chr20:36964617-37010728 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 180 30 1224 83 1 10 445 RBL1,SAMHD1
SE_02_059100465 chr20:36967481-37016124 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 465 17 1294 86 1 10 445 RBL1,SAMHD1
SE_02_002600396 chr20:36968971-37016710 Sample_02_0026 Blood CD4donorE 396 14 1267 83 1 10 445 RBL1,SAMHD1
SE_02_073900625 chr20:36969078-37010187 Sample_02_0739 Blood Nalm6 625 11 1083 71 1 10 445 RBL1,SAMHD1,RPN2,MROH8
SE_02_057300524 chr20:36969216-37010268 Sample_02_0573 Blood Nalm6_1 524 14 1082 71 1 10 445 RBL1,SAMHD1,RPN2,MROH8
SE_02_125100205 chr20:36969416-37009794 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 205 25 1065 70 1 10 445 RBL1,SAMHD1
SE_02_111201032 chr20:36969513-37073693 Sample_02_1112 T lymphocyte THP-6 T-ALL 1032 19 2572 149 1 104 1057 RBL1,SAMHD1
SE_02_125200220 chr20:36969721-37010987 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 220 18 1086 73 1 10 445 RBL1,SAMHD1
SE_02_125000182 chr20:36969815-37010665 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 182 23 1076 73 1 10 445 RBL1,SAMHD1
SE_02_062200434 chr20:36990667-37014683 Sample_02_0622 Blood EOL1_Naive 434 8 629 32 1 10 445 RBL1,SAMHD1
Genomic distribution of SEs associated with SAMHD1
Genome Browser

The strength of the tissue affected by the gene

Expression of SAMHD1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)