SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000148303
Gene: RPL7A Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:133348218-133351426 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_032300367 chr9:133345687-133351032 Sample_02_0323 Colon RKO 367 1 186 18 0 41 552 RPL7A,MED22,SNORD36C,SNORD36B,SNORD36A,SNORD24,SURF1,C9ORF96,SURF6,SURF2,SURF4
SE_02_032800592 chr9:133346015-133350467 Sample_02_0328 Embryo H9_naive 592 1 155 17 0 37 487 RPL7A,SNORD24,SNORD36A,MED22,SNORD36B,SURF1,C9ORF96,SURF6,SNORD36C,SURF2,SURF4
SE_02_043600110 chr9:133346071-133350280 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 110 1 145 17 0 32 462 SNORD24,RPL7A,MED22,SNORD36B,SURF1,C9ORF96,SURF6,SNORD36C,SURF2,SURF4,SNORD36A
SE_02_039601806 chr9:133346366-133350579 Sample_02_0396 Skin NHEK-D 1806 1 149 16 0 37 486 RPL7A,SNORD24,SNORD36A,MED22,SNORD36B,SURF1,C9ORF96,SURF6,SNORD36C,SURF2,SURF4
SE_02_043500166 chr9:133346411-133350361 Sample_02_0435 Kidney HEK293A_WT-MEF2B_DMSO_6h 166 1 137 16 0 36 462 SNORD24,RPL7A,MED22,SNORD36B,SURF1,C9ORF96,SURF6,SNORD36C,SURF2,SURF4,SNORD36A
SE_02_058400796 chr9:133346643-133350424 Sample_02_0584 Lung H1299 WT 796 1 136 16 0 34 427 MED22,SNORD24,RPL7A,SNORD36B,SURF2,SURF6,SURF4,SNORD36C,SNORD36A,STKLD1,SURF1
Genomic distribution of SEs associated with RPL7A
Genome Browser

The strength of the tissue affected by the gene

Expression of RPL7A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)