Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000253570 |
| Gene: | RNF5P1 | Gene type: | processed_pseudogene |
| Strand: | - | External links: |
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| Genomic region: | chr8:38600661-38601200 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_068700410 | chr8:38547734-38588187 |
Sample_02_0687 | Lung | NCI-H146_no infection | 410 | 12 | 1149 | 82 | 3 | 95 | 0 | RNF5P1,C8ORF86 |
| SE_02_044600071 | chr8:38549146-38740221 |
Sample_02_0446 | Bone | osteosarcoma tumor P2 | 71 | 80 | 5307 | 308 | 17 | 408 | 394 | TACC1,RNF5P1,C8ORF86 |
| SE_02_044100415 | chr8:38549161-38584096 |
Sample_02_0441 | Bone | M112 | 415 | 20 | 1004 | 68 | 1 | 83 | 0 | RNF5P1,C8ORF86 |
| SE_02_043900362 | chr8:38549380-38584220 |
Sample_02_0439 | Bone | Hu09 | 362 | 21 | 1003 | 68 | 2 | 83 | 0 | RNF5P1,C8ORF86 |
| SE_01_010100398 | chr8:38551218-38590631 |
Sample_01_0101 | Pancreas | pancreas_54y | 398 | 10 | 1124 | 81 | 5 | 96 | 0 | RNF5P1,C8ORF86 |
| SE_02_104603443 | chr8:38554226-38585786 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 3443 | 8 | 912 | 62 | 3 | 66 | 0 | RNF5P1,C8ORF86 |
| SE_02_044100051 | chr8:38603000-38721464 |
Sample_02_0441 | Bone | M112 | 51 | 34 | 3273 | 184 | 9 | 286 | 0 | TACC1,RNF5P1 |
| SE_02_043900043 | chr8:38605534-38698489 |
Sample_02_0439 | Bone | Hu09 | 43 | 26 | 2542 | 125 | 7 | 239 | 0 | TACC1,RNF5P1 |
| SE_02_148900173 | chr8:38622039-38650578 |
Sample_02_1489 | Bone | TC-106 | 173 | 5 | 790 | 35 | 0 | 50 | 0 | RNF5P1 |
| SE_02_148200822 | chr8:38622275-38652259 |
Sample_02_1482 | Bone | POE | 822 | 7 | 826 | 39 | 0 | 79 | 0 | RNF5P1 |
| SE_02_143201694 | chr8:38624569-38652278 |
Sample_02_1432 | Bone | A673 STAG2 WT | 1694 | 6 | 742 | 35 | 0 | 79 | 0 | RNF5P1 |
| SE_02_124900482 | chr8:38642815-38652188 |
Sample_02_1249 | Bone marrow | RS4_11_DMSO_4h | 482 | 9 | 253 | 14 | 0 | 52 | 0 | RNF5P1 |
| SE_02_125000433 | chr8:38642851-38652404 |
Sample_02_1250 | Bone marrow | RS4_11_AZD1775 _4h | 433 | 8 | 255 | 16 | 0 | 52 | 0 | RNF5P1 |
| SE_02_125200560 | chr8:38643647-38652291 |
Sample_02_1252 | Bone marrow | RS4_11_DMSO_10h | 560 | 7 | 224 | 13 | 0 | 52 | 0 | RNF5P1,C8ORF86 |
| SE_02_156100294 | chr8:38644077-38651071 |
Sample_02_1561 | Gastrointestinal Stromal | GIST-10_PDGFRA e1 | 294 | 2 | 186 | 9 | 0 | 51 | 0 | RNF5P1,TACC1 |
Genomic distribution of SEs associated with RNF5P1