SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000233672
Gene: RNASEH2B-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr13:50862172-50910764 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_143100103 chr13:50864659-50993942 Sample_02_1431 Blood T cell 103 19 3057 243 4 112 891 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_111200038 chr13:50883880-50943492 Sample_02_1112 T lymphocyte THP-6 T-ALL 38 14 1409 126 2 62 550 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_073900117 chr13:50888895-50935564 Sample_02_0739 Blood Nalm6 117 14 1117 95 2 52 535 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_068200059 chr13:50890172-50936848 Sample_02_0682 Blood Kasumi-1 59 9 1116 89 1 54 486 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_134000039 chr13:50890211-50937014 Sample_02_1340 Blood acute myeloid leukemia 39 12 1122 90 1 54 486 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_109800042 chr13:50891911-50946869 Sample_02_1098 Blood THP1_DMSO_noPMA 42 15 1300 106 1 62 552 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_133100076 chr13:50892237-50938996 Sample_02_1331 Blood Molm13_CTRL 76 10 1116 88 1 54 486 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_156000728 chr13:50892268-50929808 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 728 10 889 78 1 41 393 RNASEH2B,RNASEH2B-AS1,DLEU7
SE_02_058100033 chr13:50908329-50937443 Sample_02_0581 Blood MOLM13_empty_HG 33 8 747 47 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_057700028 chr13:50908342-50937478 Sample_02_0577 Blood MOLM13_empty 28 9 747 47 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_057400039 chr13:50908406-50937401 Sample_02_0574 Blood MOLM-13_sgNeg2 39 12 745 47 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_058200038 chr13:50908434-50937430 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 38 7 743 47 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_057500050 chr13:50908495-50937372 Sample_02_0575 Blood MOLM13_sgLKB1e2 50 16 741 47 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_134900175 chr13:50908535-50920095 Sample_02_1349 Leukophereses leukophereses_p411 175 4 284 22 1 13 333 RNASEH2B,RNASEH2B-AS1
SE_02_099400045 chr13:50908582-50936799 Sample_02_0994 Blood MOLM13_SIK3TQ 45 13 724 42 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_099500030 chr13:50908749-50937546 Sample_02_0995 Blood MOLM-13_empty vector 30 15 736 45 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_057800040 chr13:50908777-50936798 Sample_02_0578 Blood MOLM-13_sgSIK3e4 40 11 722 42 1 42 486 RNASEH2B,RNASEH2B-AS1
SE_02_134600159 chr13:50908796-50934988 Sample_02_1346 Leukophereses leukophereses_p400 159 9 669 42 1 37 465 RNASEH2B,RNASEH2B-AS1
SE_02_103400526 chr13:50908876-50934845 Sample_02_1034 Blood AML cell 526 3 667 42 1 37 453 RNASEH2B,RNASEH2B-AS1
SE_02_050100289 chr13:50909089-50918049 Sample_02_0501 Blood HL-60_CTRL 289 3 224 17 1 12 333 RNASEH2B,RNASEH2B-AS1
SE_02_099300102 chr13:50912237-50937197 Sample_02_0993 Blood MOLM-13_empty 102 14 649 36 1 35 153 RNASEH2B,RNASEH2B-AS1
SE_02_046400096 chr13:50915315-50936599 Sample_02_0464 Bone marrow MOLM-13 96 15 564 30 0 33 153 RNASEH2B,RNASEH2B-AS1
Genomic distribution of SEs associated with RNASEH2B-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of RNASEH2B-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)