SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000185236
Gene: RAB11B Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:8389981-8404434 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_007200221 chr19:8354928-8405145 Sample_01_0072 Breast epithelium breast-epithelium 221 8 1612 159 4 161 1986 RAB11B,ANGPTL4,CD320,NDUFA7,HNRNPM,MARCH2,KANK3,RPS28
SE_01_000100105 chr19:8361699-8395785 Sample_01_0001 Prostate 22Rv1 105 4 1071 99 3 113 1243 RAB11B,ANGPTL4,NDUFA7,HNRNPM,MARCH2,KANK3,RPS28
SE_01_007100188 chr19:8361700-8395344 Sample_01_0071 Pancreas body-of-pancreas 188 6 1055 96 3 113 1243 RAB11B,ANGPTL4,NDUFA7,HNRNPM,MARCH2,KANK3,RPS28
SE_01_008501148 chr19:8385260-8396103 Sample_01_0085 Stomach stomach 1148 1 356 43 0 53 302 RAB11B,KANK3,ANGPTL4,MARCH2,HNRNPM
SE_01_010100864 chr19:8385423-8395383 Sample_01_0101 Pancreas pancreas_54y 864 1 327 40 0 53 302 RAB11B,RAB11B-AS1,MIR4999,HNRNPM,MARCH2,KANK3,ANGPTL4
SE_02_003200765 chr19:8387280-8398802 Sample_02_0032 Pancreas pancreatic-islets-M 765 2 354 46 0 58 302 RAB11B,KANK3,ANGPTL4,MARCH2,HNRNPM
SE_02_044500938 chr19:8387846-8392672 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 938 1 157 21 0 42 302 RAB11B,RAB11B-AS1,MIR4999,ANGPTL4,MARCH2,KANK3
SE_02_035000389 chr19:8390271-8398716 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 389 5 239 30 0 49 179 RAB11B,KANK3,ANGPTL4,MARCH2,HNRNPM
Genomic distribution of SEs associated with RAB11B
Genome Browser

The strength of the tissue affected by the gene

Expression of RAB11B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)