Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000275450
Gene: PTGER4P2-CDK2AP2P2 Gene type: lncRNA
Strand: + External links:
Genomic region: chr9:41276280-41282846 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_085800801 chr9:62813803-62839266 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 801 4 213 12 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_124400080 chr9:62825140-62845082 Sample_02_1244 Brain KCNR_ATRA 80 4 192 6 0 0 319 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_103601660 chr9:62830896-62844990 Sample_02_1036 Mammary gland HCC70_XY018 1660 3 167 4 0 0 296 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_096300134 chr9:62832687-62839473 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 134 1 82 2 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_085600330 chr9:62832947-62839251 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 330 1 79 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_098100188 chr9:62832973-62839224 Sample_02_0981 Brain H3.3K27M-KO_BT245-C4P6 188 1 79 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_097300210 chr9:62833081-62839215 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 210 1 79 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_118100905 chr9:62833139-62839298 Sample_02_1181 Brain GBM10 905 2 79 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_110400165 chr9:62833198-62839307 Sample_02_1104 Brain NB-69 165 3 78 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_096800456 chr9:62833266-62839239 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 456 3 76 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_117900297 chr9:62833271-62839196 Sample_02_1179 Brain GBM08 297 1 76 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_097100968 chr9:62833284-62839317 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 968 2 76 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_117600573 chr9:62833323-62839222 Sample_02_1176 Brain GBM04 573 3 76 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_118900225 chr9:62833330-62839298 Sample_02_1189 Brain GBM22 225 2 76 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_097800403 chr9:62833364-62838539 Sample_02_0978 Brain 2168_IDH1 403 2 68 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_098200402 chr9:62833440-62838994 Sample_02_0982 Brain H3.3K27M-KO_BT245-C2P3 402 1 72 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_095500322 chr9:62833528-62839080 Sample_02_0955 Brain IDH1_2469 322 3 72 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_139100543 chr9:62834672-62839381 Sample_02_1391 Peripheral blood FE-PD_ALK- 543 1 58 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_122300845 chr9:62835261-62839255 Sample_02_1223 Bone marrow KMS28BM 845 1 55 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_055500645 chr9:62835609-62839165 Sample_02_0555 Other HAP1_WT 645 2 52 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_068700883 chr9:62835753-62839364 Sample_02_0687 Lung NCI-H146_no infection 883 2 51 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410
SE_02_085400283 chr9:62836048-62839242 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 283 1 46 1 0 0 0 PTGER4P2-CDK2AP2P2,LINC01410

Genomic distribution of SEs associated with PTGER4P2-CDK2AP2P2

The strength of the tissue affected by the gene


Expression of PTGER4P2-CDK2AP2P2