SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000140368
Gene: PSTPIP1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:76993359-77037475 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_155300118 chr15:76941023-77040714 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 118 52 2853 197 3 216 2242 RCN2,PSTPIP1,TSPAN3
SE_02_119500555 chr15:76941031-77045570 Sample_02_1195 Brain GBM29 555 32 2993 204 3 219 2508 RCN2,PSTPIP1,TSPAN3
SE_02_104700031 chr15:76957966-77043513 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 31 32 2566 165 2 171 2015 PSTPIP1,RCN2,TSPAN3
SE_02_104600315 chr15:76960828-77043286 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 315 39 2468 158 2 171 2015 PSTPIP1,RCN2,TSPAN3
SE_02_156500091 chr15:76960916-76998907 Sample_02_1565 Gastrointestinal Stromal Gastrointestinal stromal tumor 91 16 993 61 1 85 313 PSTPIP1,RCN2
SE_02_104300096 chr15:76965152-77053422 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 96 55 2583 170 1 180 2506 PSTPIP1,TSPAN3,RCN2
SE_02_039601392 chr15:76967058-77038957 Sample_02_0396 Skin NHEK-D 1392 13 2177 149 1 131 2015 PSTPIP1,RCN2,TSPAN3
SE_02_119701054 chr15:76967092-77045725 Sample_02_1197 Brain GBM33 1054 19 2368 157 1 144 2308 PSTPIP1,TSPAN3,RCN2
SE_02_133000121 chr15:76968381-77037873 Sample_02_1330 Blood AMU-AML1 121 27 2104 146 1 131 2015 PSTPIP1,RCN2,TSPAN3
SE_02_104900054 chr15:76973178-77038192 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 54 31 2013 141 1 123 2015 PSTPIP1,RCN2,TSPAN3
SE_02_012600155 chr15:76973257-77024754 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 155 7 1466 120 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_013200126 chr15:76973257-77024754 Sample_02_0132 Lung 1015_CL 126 7 1466 120 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_012700197 chr15:76973306-77024489 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 197 10 1457 120 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_013100162 chr15:76973306-77024489 Sample_02_0131 Lung 1015_PT 162 10 1457 120 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_010100240 chr15:76973398-77027825 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 240 9 1559 122 1 92 884 PSTPIP1,RCN2,TSPAN3
SE_02_083500759 chr15:76973523-77032200 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 759 15 1728 127 1 101 1431 PSTPIP1,RCN2,TSPAN3
SE_02_084100267 chr15:76973579-77022988 Sample_02_0841 Blood THP-1_untr 267 18 1401 117 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_083700268 chr15:76973612-77038592 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 268 24 2015 140 1 123 2015 PSTPIP1,RCN2,TSPAN3
SE_02_145800332 chr15:76973619-77024426 Sample_02_1458 Pancreas THP1+PANC1_shNC 332 14 1449 119 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_083400462 chr15:76973638-77038169 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 462 20 2001 140 1 123 2015 PSTPIP1,RCN2,TSPAN3
SE_02_083300442 chr15:76973642-77031990 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 442 17 1719 125 1 101 1416 PSTPIP1,RCN2,TSPAN3
SE_02_133200409 chr15:76973651-77037668 Sample_02_1332 Blood Monomac6_CTRL 409 17 1963 138 1 123 2015 PSTPIP1,RCN2,TSPAN3
SE_02_092800386 chr15:76973669-77022511 Sample_02_0928 Peripheral blood neutrophils_Ecoli 386 16 1387 115 0 86 652 PSTPIP1,RCN2,TSPAN3
SE_02_152900322 chr15:76973752-77043236 Sample_02_1529 Peripheral blood neutrophils_0BC75 322 34 2151 145 1 135 2015 PSTPIP1,RCN2,TSPAN3
SE_02_122700394 chr15:76973775-77035258 Sample_02_1227 Bone marrow U266 394 18 1835 134 1 112 1659 PSTPIP1,RCN2,TSPAN3
SE_02_153000247 chr15:76974622-77041150 Sample_02_1530 Peripheral blood neutrophils_0BA0X 247 18 2059 141 1 135 2015 PSTPIP1,RCN2,TSPAN3
SE_02_134500242 chr15:76975371-77022670 Sample_02_1345 Leukophereses leukophereses_p358 242 27 1346 113 1 86 652 PSTPIP1,RCN2,TSPAN3
SE_01_005200265 chr15:76975714-77021577 Sample_01_0052 Blood neutrophil 265 8 1296 107 0 85 652 PSTPIP1,RCN2,TSPAN3
SE_02_153100343 chr15:76975916-77027065 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 343 18 1468 115 1 90 830 PSTPIP1,RCN2,TSPAN3
SE_01_002400237 chr15:76975957-77043414 Sample_01_0024 Blood CD14-positive-monocyte 237 13 2090 141 1 133 2015 PSTPIP1,RCN2,TSPAN3
SE_02_010400144 chr15:76976035-77023178 Sample_02_0104 Blood neutrophils 144 11 1338 111 1 84 652 PSTPIP1,RCN2,TSPAN3
SE_02_050100380 chr15:76976311-77023353 Sample_02_0501 Blood HL-60_CTRL 380 12 1336 111 1 84 652 PSTPIP1,RCN2,TSPAN3
SE_02_045500139 chr15:76976353-77023558 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 139 11 1345 111 1 84 652 PSTPIP1,RCN2,TSPAN3
SE_02_138800295 chr15:76976375-77023785 Sample_02_1388 Peripheral blood JB6_ALK+ 295 19 1352 111 1 84 652 PSTPIP1,RCN2,TSPAN3
SE_02_083600431 chr15:76976405-77038496 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 431 23 1928 134 1 121 2015 PSTPIP1,RCN2,TSPAN3
SE_02_034300461 chr15:76976835-77023129 Sample_02_0343 Bone marrow HSPC_A0 461 8 1316 110 1 83 652 PSTPIP1,RCN2,TSPAN3
SE_00_000600315 chr15:76981796-77038974 Sample_00_0006 Blood CD14-positive-monocyte 315 9 1823 130 1 119 2015 PSTPIP1,TSPAN3
SE_02_010200479 chr15:76981839-77022610 Sample_02_0102 Peripheral blood Macrophages_GM-CSF_72h_IL4 479 8 1185 103 0 82 652 PSTPIP1,TSPAN3
SE_02_010000259 chr15:76981859-77022678 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 259 9 1186 104 1 82 652 PSTPIP1,TSPAN3
SE_02_025600786 chr15:76982000-77038354 Sample_02_0256 Peripheral blood MV411 786 7 1798 128 1 119 2015 PSTPIP1,TSPAN3
SE_02_034700167 chr15:76982032-77016320 Sample_02_0347 Blood AML11 167 10 995 77 0 75 488 PSTPIP1
SE_02_010300213 chr15:76982078-77023530 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 213 5 1217 105 1 82 652 PSTPIP1,TSPAN3
SE_02_034200281 chr15:76982121-77027533 Sample_02_0342 Liver HSPCs_F0 281 12 1337 109 1 87 830 PSTPIP1,TSPAN3
SE_02_139400133 chr15:76982178-77003735 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 133 8 627 44 0 53 385 PSTPIP1
SE_02_133100403 chr15:76982216-77033828 Sample_02_1331 Blood Molm13_CTRL 403 13 1578 117 1 108 1659 PSTPIP1,TSPAN3
SE_02_054800400 chr15:76982226-77015195 Sample_02_0548 Blood THP-1_24h with EtOH 400 11 949 67 0 73 488 PSTPIP1
SE_02_131600481 chr15:76982288-77031303 Sample_02_1316 Brain hMGLs_TREM2-R47H 481 12 1481 113 1 97 1376 PSTPIP1,TSPAN3
SE_02_025500468 chr15:76982288-77037970 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 468 9 1774 128 1 119 2015 PSTPIP1,TSPAN3
SE_02_109800480 chr15:76982463-77015072 Sample_02_1098 Blood THP1_DMSO_noPMA 480 11 943 67 0 72 488 PSTPIP1
SE_02_146000087 chr15:76982679-77038120 Sample_02_1460 Blood Mutz-3 87 23 1778 128 1 118 2015 PSTPIP1,TSPAN3
SE_02_119100747 chr15:76982940-77024242 Sample_02_1191 Brain GBM25 747 18 1213 106 1 81 652 PSTPIP1,TSPAN3
SE_02_099300848 chr15:76983026-77022800 Sample_02_0993 Blood MOLM-13_empty 848 14 1162 104 1 81 652 PSTPIP1,TSPAN3
SE_01_008400396 chr15:76983177-77045401 Sample_01_0084 Spleen spleen 396 13 1971 137 1 131 2257 TSPAN3,PSTPIP1
SE_02_061200593 chr15:76983334-77022902 Sample_02_0612 Liposarcoma DDLPS_T2 593 15 1161 102 1 79 652 PSTPIP1,TSPAN3
SE_02_157300825 chr15:76983393-77023059 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 825 16 1165 102 1 79 652 PSTPIP1,TSPAN3
SE_02_034500410 chr15:76983424-77015695 Sample_02_0345 Blood AML8 410 5 942 69 0 70 488 PSTPIP1
SE_02_145900240 chr15:76983449-77023024 Sample_02_1459 Pancreas THP1+PANC1_shCTCF 240 10 1163 102 1 79 652 PSTPIP1,TSPAN3
SE_00_005500314 chr15:76983465-77044703 Sample_00_0055 Spleen spleen 34y 314 17 1951 133 1 129 2143 PSTPIP1,TSPAN3
SE_00_005600913 chr15:76983625-77022779 Sample_00_0056 Sigmoid colon sigmoid colon 3y 913 19 1149 101 1 79 652 PSTPIP1,TSPAN3
SE_02_093001099 chr15:76983665-77023443 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1099 25 1176 102 1 79 652 PSTPIP1,TSPAN3
SE_02_046300323 chr15:76983884-77022026 Sample_02_0463 Blood OCI-AML3 cells 323 12 1120 99 0 79 652 PSTPIP1,TSPAN3
SE_02_138600557 chr15:76983907-76997257 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 557 6 380 28 0 42 313 PSTPIP1
SE_02_023400530 chr15:76986561-77035219 Sample_02_0234 Tonsil Th17 530 11 1515 116 1 105 1659 PSTPIP1,TSPAN3
SE_02_107400216 chr15:76986623-76999478 Sample_02_1074 Lymphoma BC-1 216 6 385 34 0 42 338 PSTPIP1
SE_02_023300373 chr15:76986657-77022773 Sample_02_0233 Tonsil Th1 373 10 1068 98 1 79 652 PSTPIP1,TSPAN3
SE_02_045700151 chr15:76986760-77023296 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 151 12 1087 99 1 79 652 PSTPIP1,TSPAN3
SE_02_078201077 chr15:76986854-77024392 Sample_02_0782 Blood MEC1 1077 10 1119 101 1 79 652 PSTPIP1,TSPAN3
SE_02_104500099 chr15:76986873-77036791 Sample_02_1045 Peripheral blood CD4+ CD7- cells_CTCL992 99 31 1575 118 1 114 1849 PSTPIP1,TSPAN3
SE_02_139300157 chr15:76987000-77023106 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 157 11 1072 99 1 79 652 PSTPIP1,TSPAN3
SE_02_082600514 chr15:76987219-77023759 Sample_02_0826 Stomach gastric tumor 514 21 1094 99 1 79 652 PSTPIP1,TSPAN3
SE_02_045600174 chr15:76987608-77025109 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 174 11 1116 101 1 78 652 PSTPIP1,TSPAN3
SE_02_045400185 chr15:76987667-77025360 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 185 9 1120 100 1 82 719 PSTPIP1,TSPAN3
SE_00_000900251 chr15:76987703-77036489 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 251 8 1539 117 1 113 1849 PSTPIP1,TSPAN3
SE_02_104000082 chr15:76988358-77037949 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 82 34 1615 119 1 115 2015 PSTPIP1,TSPAN3
SE_02_104100026 chr15:76988380-77024049 Sample_02_1041 Peripheral blood CD4+ cells_CTCL1135 26 17 1067 97 1 78 652 PSTPIP1,TSPAN3
SE_02_059200125 chr15:76988414-77022750 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 125 6 1019 94 1 78 652 PSTPIP1,TSPAN3
SE_02_012800370 chr15:76988415-77035183 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 370 19 1460 112 1 104 1659 PSTPIP1,TSPAN3
SE_02_038700528 chr15:76989121-77014480 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 528 5 742 51 0 64 488 PSTPIP1
SE_02_104800112 chr15:76990930-77038044 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 112 41 1538 111 1 108 2015 PSTPIP1,TSPAN3
SE_00_000800251 chr15:76992616-77026222 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 251 3 1002 83 1 74 830 PSTPIP1,TSPAN3
SE_00_004400352 chr15:76992977-77024601 Sample_00_0044 Cord blood T-cell 352 3 947 82 1 69 652 PSTPIP1,TSPAN3
SE_00_002700294 chr15:76993157-77035714 Sample_00_0027 Blood natural-killer-cell 294 4 1342 98 1 103 1758 PSTPIP1,TSPAN3
SE_02_002200194 chr15:76993401-77044718 Sample_02_0022 Blood CD8donorA 194 19 1674 111 1 119 2143 TSPAN3,PSTPIP1
SE_00_004700505 chr15:76993514-77023301 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 505 9 894 80 1 69 652 PSTPIP1,TSPAN3
SE_02_059100355 chr15:76993837-77023095 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 355 16 874 80 1 69 652 PSTPIP1,TSPAN3
SE_02_002300192 chr15:76994033-77031383 Sample_02_0023 Blood CD8donorC 192 24 1162 88 1 84 1391 PSTPIP1,TSPAN3
SE_02_014800279 chr15:76994061-77023198 Sample_02_0148 Blood CD8_T_cells 279 11 874 80 1 68 652 PSTPIP1,TSPAN3
SE_02_088601331 chr15:76994258-77036917 Sample_02_0886 Skin foreskin_ p63KLF4 1331 16 1371 99 1 93 1862 PSTPIP1,TSPAN3
SE_02_002400246 chr15:76994299-77035433 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 246 19 1302 98 1 87 1683 PSTPIP1,TSPAN3
SE_02_023200470 chr15:76994483-77023161 Sample_02_0232 Tonsil ILC3 470 7 860 79 1 50 651 PSTPIP1,TSPAN3
SE_02_023100431 chr15:76994621-77022829 Sample_02_0231 Tonsil ILC1 431 8 844 77 1 50 617 PSTPIP1,TSPAN3
SE_02_059300671 chr15:76994682-77022872 Sample_02_0593 Fetal spleenocytes fetal naive T cells 671 10 845 77 1 50 609 PSTPIP1,TSPAN3
SE_02_114500266 chr15:76996401-77037101 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 266 27 1320 94 1 73 1606 PSTPIP1,TSPAN3
SE_02_104200237 chr15:76997165-77022582 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 237 18 758 72 0 37 339 PSTPIP1,TSPAN3
SE_02_104400145 chr15:77001378-77022594 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 145 12 626 61 0 36 267 PSTPIP1,TSPAN3
SE_02_082700872 chr15:77004529-77017293 Sample_02_0827 Stomach normal gastric 872 3 368 34 0 17 103 PSTPIP1
SE_02_096200593 chr15:77014372-77046910 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 593 11 1108 78 1 66 1923 PSTPIP1,TSPAN3
SE_02_096100089 chr15:77014492-77045603 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 89 16 1070 74 1 60 1799 PSTPIP1,TSPAN3
SE_02_021600986 chr15:77014641-77032694 Sample_02_0216 Skin NHEK_scramble 986 5 602 51 1 31 1067 PSTPIP1,TSPAN3
SE_02_114200196 chr15:77017501-77034475 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 196 10 583 39 1 31 1171 PSTPIP1,TSPAN3
SE_02_096600733 chr15:77019676-77045029 Sample_02_0966 Brain H3.3K27M_JN29-BS3 733 10 900 45 1 50 1550 PSTPIP1,TSPAN3
SE_02_103900306 chr15:77021808-77038148 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 306 5 638 27 1 37 1363 PSTPIP1,TSPAN3
Genomic distribution of SEs associated with PSTPIP1
Genome Browser

The strength of the tissue affected by the gene

Expression of PSTPIP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)