Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000147613 |
| Gene: | PSKH2 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr8:86047109-86088621 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_156000007 | chr8:85830040-85987311 |
Sample_02_1560 | Gastrointestinal Stromal | GIST-9_PDGFRA e18 | 7 | 63 | 3914 | 158 | 1 | 190 | 0 | PSKH2,REXO1L2P |
| SE_04_000100543 | chr8:85892617-85973536 |
Sample_04_0001 | Blood | heat shocked K562 | 543 | 13 | 2037 | 91 | 0 | 90 | 0 | PSKH2,REXO1L2P |
| SE_02_155900299 | chr8:85902100-85940831 |
Sample_02_1559 | Gastrointestinal Stromal | GIST-8_PDGFRA e18 | 299 | 23 | 1002 | 50 | 0 | 42 | 0 | PSKH2,REXO1L2P |
| SE_02_155400543 | chr8:85902154-85940742 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 543 | 16 | 996 | 50 | 0 | 42 | 0 | PSKH2,REXO1L2P |
| SE_02_155600153 | chr8:85902323-85940937 |
Sample_02_1556 | Gastrointestinal Stromal | GIST-5_KIT e9 | 153 | 12 | 1001 | 50 | 0 | 42 | 0 | PSKH2,REXO1L2P |
| SE_02_155800261 | chr8:85902365-85939812 |
Sample_02_1558 | Gastrointestinal Stromal | GIST-7_PDGFRA e18 | 261 | 9 | 974 | 49 | 0 | 41 | 0 | PSKH2,REXO1L2P |
| SE_02_155500468 | chr8:85904162-85939676 |
Sample_02_1555 | Gastrointestinal Stromal | GIST-4_KIT e9 | 468 | 12 | 924 | 44 | 0 | 37 | 0 | PSKH2,REXO1L2P |
| SE_02_011400116 | chr8:85907385-85993368 |
Sample_02_0114 | Mammary gland | CAL51 | 116 | 24 | 2239 | 86 | 0 | 110 | 0 | PSKH2,WWP1 |
| SE_02_122901273 | chr8:85920941-85965024 |
Sample_02_1229 | Haematopoietic and lymphoid tissue bone marrow | K562_Control | 1273 | 18 | 1129 | 49 | 0 | 45 | 0 | PSKH2,REXO1L2P |
| SE_02_062900457 | chr8:85935147-85942121 |
Sample_02_0629 | Gastrointestinal Stromal | GIST-T1_DMSO | 457 | 1 | 190 | 5 | 0 | 5 | 0 | PSKH2,ATP6V0D2 |
| SE_02_063100478 | chr8:85935715-85941194 |
Sample_02_0631 | Gastrointestinal Stromal | GIST-T1_JQ1 | 478 | 1 | 151 | 5 | 0 | 3 | 0 | PSKH2,ATP6V0D2 |
| SE_02_062900216 | chr8:85955854-85973547 |
Sample_02_0629 | Gastrointestinal Stromal | GIST-T1_DMSO | 216 | 4 | 445 | 16 | 0 | 29 | 0 | PSKH2,ATP6V0D2 |
| SE_02_154200123 | chr8:85955941-85973478 |
Sample_02_1542 | Gastrointestinal Stromal | GIST-T1 | 123 | 11 | 444 | 16 | 0 | 29 | 0 | PSKH2,ATP6V0D2 |
| SE_02_155900513 | chr8:85956029-85976346 |
Sample_02_1559 | Gastrointestinal Stromal | GIST-8_PDGFRA e18 | 513 | 12 | 512 | 17 | 0 | 37 | 0 | PSKH2,REXO1L2P |
| SE_02_063000548 | chr8:85956116-85973480 |
Sample_02_0630 | Gastrointestinal Stromal | GIST-T1_Imatinib | 548 | 5 | 441 | 16 | 0 | 29 | 0 | PSKH2,ATP6V0D2 |
| SE_02_155800354 | chr8:85956277-85975231 |
Sample_02_1558 | Gastrointestinal Stromal | GIST-7_PDGFRA e18 | 354 | 7 | 473 | 15 | 0 | 32 | 0 | PSKH2,REXO1L2P |
| SE_02_155400326 | chr8:85956858-85981163 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 326 | 14 | 640 | 19 | 0 | 41 | 0 | PSKH2,REXO1L2P |
| SE_02_082300464 | chr8:85957511-85962768 |
Sample_02_0823 | Haematopoietic and lymphoid tissue | SET-2_insR_GSK-LSD1 | 464 | 1 | 126 | 6 | 0 | 2 | 0 | PSKH2 |
| SE_02_063100259 | chr8:85957719-85973462 |
Sample_02_0631 | Gastrointestinal Stromal | GIST-T1_JQ1 | 259 | 4 | 395 | 13 | 0 | 29 | 0 | PSKH2,ATP6V0D2 |
| SE_02_082200740 | chr8:85957830-85962685 |
Sample_02_0822 | Haematopoietic and lymphoid tissue | SET-2_insR_DMSO | 740 | 1 | 109 | 6 | 0 | 2 | 0 | PSKH2 |
| SE_02_155600227 | chr8:85959423-85979406 |
Sample_02_1556 | Gastrointestinal Stromal | GIST-5_KIT e9 | 227 | 9 | 519 | 15 | 0 | 39 | 0 | PSKH2,REXO1L2P |
| SE_02_006300310 | chr8:85964628-86008668 |
Sample_02_0063 | Skin | Keratinocytes | 310 | 4 | 1195 | 35 | 2 | 78 | 0 | PSKH2,ATP6V0D2 |
| SE_02_050700137 | chr8:85965836-86004810 |
Sample_02_0507 | Esophagus | TE7_1 | 137 | 15 | 1055 | 31 | 2 | 78 | 0 | PSKH2,REXO1L2P |
| SE_02_077100406 | chr8:85971665-86007917 |
Sample_02_0771 | Ovary | OVCA429_shGRHL2 | 406 | 19 | 993 | 30 | 2 | 61 | 0 | PSKH2,REXO1L2P |
| SE_02_077001054 | chr8:85972919-86008608 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 1054 | 21 | 978 | 29 | 2 | 61 | 0 | PSKH2,ATP6V0D2 |
| SE_01_009500990 | chr8:85973892-85994612 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 990 | 4 | 571 | 16 | 0 | 34 | 0 | PSKH2,REXO1L2P |
| SE_01_004100436 | chr8:85999087-86006834 |
Sample_01_0041 | Skin | keratinocyte | 436 | 2 | 211 | 4 | 0 | 13 | 0 | PSKH2,ATP6V0D2 |
| SE_02_009900824 | chr8:85999194-86004339 |
Sample_02_0099 | Foreskin | Epidermal-Stem-Cells_shDNMT3B | 824 | 1 | 138 | 2 | 0 | 13 | 0 | PSKH2,SLC7A13 |
| SE_01_004500711 | chr8:85999352-86004702 |
Sample_01_0045 | Mammary gland | mammary-epithelial-cell | 711 | 1 | 144 | 2 | 0 | 13 | 0 | PSKH2,ATP6V0D2 |
| SE_03_000300372 | chr8:85999747-86004540 |
Sample_03_0003 | Foreskin | foreskin-keratinocyte-calcium5.5day | 372 | 1 | 130 | 2 | 0 | 13 | 0 | PSKH2,WWP1 |
| SE_02_009700794 | chr8:86000158-86004083 |
Sample_02_0097 | Foreskin | Epidermal-Stem-Cells_shCTRL | 794 | 1 | 107 | 2 | 0 | 8 | 0 | PSKH2,ATP6V0D2 |
| SE_02_057601176 | chr8:86027834-86055773 |
Sample_02_0576 | Blood | HEL_sgLKB1e2 | 1176 | 7 | 796 | 30 | 0 | 21 | 73 | PSKH2,ATP6V0D2 |
| SE_02_074400296 | chr8:86039599-86074195 |
Sample_02_0744 | Embryo | ES derived cardiac mesoderm_day5 | 296 | 10 | 969 | 23 | 1 | 26 | 332 | PSKH2,ATP6V0D2 |
| SE_02_074300290 | chr8:86062419-86090210 |
Sample_02_0743 | Embryo | ES derived mesoderm_day2 | 290 | 9 | 785 | 30 | 4 | 19 | 259 | PSKH2,ATP6V0D2 |
Genomic distribution of SEs associated with PSKH2