SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000248257
Gene: PSG10P Gene type: transcribed_unprocessed_pseudogene
Strand: - External links:
Genomic region: chr19:42839368-42855718 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_04_000800174 chr19:42828454-42853766 Sample_04_0008 Lung A549 shRNA control 174 6 1277 118 0 0 343 PSG10P,LOC100289650,PSG1
SE_02_058900284 chr19:42830506-42853766 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 284 8 1203 111 0 0 343 PSG10P,LOC100289650,PSG1
SE_02_076200453 chr19:42841880-42859359 Sample_02_0762 Podocyte podocyte_CTL 453 1 1061 90 0 2 391 PSG10P,LOC100289650,PSG1
SE_02_086701250 chr19:42843870-42858122 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1250 9 918 79 0 2 391 PSG10P,LOC100289650,PSG1
SE_02_061000095 chr19:42844669-42858913 Sample_02_0610 Liposarcoma MLS 1765-92 95 1 903 82 0 2 318 PSG10P,LOC100289650,PSG1
SE_02_060500207 chr19:42844972-42855855 Sample_02_0605 Skin Skin Fibroblast_DMSO 207 1 656 59 0 0 259 PSG10P,LOC100289650,PSG1
SE_02_060600188 chr19:42845123-42855922 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 188 1 646 59 0 1 245 PSG10P,LOC100289650,PSG1
SE_02_045100176 chr19:42845249-42858820 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 176 1 851 79 0 2 222 PSG10P,LOC100289650,PSG1
SE_02_108500543 chr19:42845987-42854117 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 543 4 462 42 0 0 50 PSG10P,LOC100289650,PSG1
SE_02_154900345 chr19:42846623-42855047 Sample_02_1549 Gastrointestinal Stromal GIST-430B 345 1 476 47 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_076300475 chr19:42846923-42859258 Sample_02_0763 Podocyte podocyte_DEX 475 1 778 73 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_045200533 chr19:42847114-42855022 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 533 1 455 43 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_114900277 chr19:42847441-42858668 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 277 2 732 71 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_116800821 chr19:42847489-42854951 Sample_02_1168 Biliary H69_TGF Vehicle_2 821 1 436 43 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_116900813 chr19:42847604-42858370 Sample_02_1169 Biliary H69_TGF beta_16h_2 813 3 704 68 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_116600816 chr19:42847659-42857927 Sample_02_1166 Biliary H69_TGF beta_16h_1 816 3 669 66 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_136101138 chr19:42848141-42854616 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1138 1 363 35 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_147100825 chr19:42848336-42858733 Sample_02_1471 Blood Outgrowth Endothelia BOEC 825 2 669 61 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_064200626 chr19:42848393-42857852 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 626 4 611 56 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_072700213 chr19:42848448-42854074 Sample_02_0727 Fetal lung IMR90_Etoposide 213 1 315 28 0 0 48 PSG10P,LOC100289650,PSG1
SE_02_158200202 chr19:42848555-42858406 Sample_02_1582 Renal OS-RC-2 202 3 640 59 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_158100338 chr19:42848571-42854887 Sample_02_1581 Renal OS-LM1 338 2 363 33 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_124000610 chr19:42848634-42853959 Sample_02_1240 Skin MCC13_virus_negative 610 1 292 28 0 0 30 PSG10P,LOC100289650,PSG1
SE_02_064300886 chr19:42848697-42857774 Sample_02_0643 Mammary gland MDA-MB-436 886 4 592 55 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_088000603 chr19:42848734-42858738 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 603 3 647 61 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_132201379 chr19:42848738-42854002 Sample_02_1322 Connective Tissue HT1080_WT 1379 2 292 28 0 0 32 PSG10P,LOC100289650,PSG1
SE_02_132801053 chr19:42848776-42858914 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1053 5 652 62 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_105400783 chr19:42848997-42854106 Sample_02_1054 Esophagus SKGT4 783 2 293 28 0 0 49 PSG10P,LOC100289650,PSG1
SE_02_144600233 chr19:42848998-42854162 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 233 2 296 29 0 0 55 PSG10P,LOC100289650,PSG1
SE_02_088200583 chr19:42849094-42855074 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 583 1 343 35 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_145201062 chr19:42849416-42853885 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1062 1 246 27 0 0 13 PSG10P,LOC100289650,PSG1
SE_02_145500887 chr19:42849548-42853948 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 887 1 242 27 0 0 28 PSG10P,LOC100289650,PSG1
SE_02_093800841 chr19:42849662-42853813 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 841 1 224 26 0 0 0 PSG10P,LOC100289650,PSG1
SE_02_145400684 chr19:42849679-42858747 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 684 3 598 59 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_071201098 chr19:42849698-42858907 Sample_02_0712 Pancreas BxPC3_sgNEG 1098 3 604 60 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_093900307 chr19:42849727-42853995 Sample_02_0939 Mammary gland MDA-MB-231_control 307 1 239 26 0 0 32 PSG10P,LOC100289650,PSG1
SE_02_137901015 chr19:42849824-42853772 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 1015 3 210 24 0 0 0 PSG10P,LOC100289650,PSG1
SE_02_132001492 chr19:42849824-42853888 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1492 1 224 25 0 0 13 PSG10P,LOC100289650,PSG1
SE_02_048001280 chr19:42849901-42859177 Sample_02_0480 Gingival epithelial HGEP 1280 3 603 59 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_072600465 chr19:42850240-42853945 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 465 4 204 23 0 0 27 PSG10P,LOC100289650,PSG1
SE_02_139000737 chr19:42850335-42853895 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 737 1 199 23 0 0 14 PSG10P,LOC100289650,PSG1
Genomic distribution of SEs associated with PSG10P
Genome Browser

The strength of the tissue affected by the gene

Expression of PSG10P

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)