SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000231924
Gene: PSG1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:42866464-42879822 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_136000043 chr19:42847625-42900828 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 43 11 3046 265 0 7 833 PSG10P,PSG1,PSG6,LOC100289650,PSG7
SE_02_084600276 chr19:42848252-42900838 Sample_02_0846 Mammary gland MDA-MB-231_untreat 276 16 2997 256 0 7 833 PSG10P,PSG1,PSG6,LOC100289650,PSG7
SE_02_136200100 chr19:42848662-42900813 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 100 15 2976 256 0 7 833 PSG10P,PSG1,PSG6,LOC100289650,PSG7
SE_02_139800615 chr19:42869417-42901113 Sample_02_1398 Bone U2OS_siNC 615 10 1768 142 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_076200256 chr19:42869537-42889543 Sample_02_0762 Podocyte podocyte_CTL 256 1 1182 100 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_031700555 chr19:42870863-42888241 Sample_02_0317 Neuroblastoma GICAN 555 1 1047 94 0 5 291 PSG1,PSG7,PSG10,PSG6,LOC100289650
SE_02_061000035 chr19:42870964-42892337 Sample_02_0610 Liposarcoma MLS 1765-92 35 1 1237 105 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_076300195 chr19:42870991-42889561 Sample_02_0763 Podocyte podocyte_DEX 195 1 1094 96 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_027000169 chr19:42871075-42890517 Sample_02_0270 Kidney PCS-400 169 5 1155 102 0 5 291 PSG1,PSG7,PSG10,PSG6,LOC100289650
SE_02_027400777 chr19:42871079-42915975 Sample_02_0274 Endometriosis hTERT_KD 777 9 2540 199 1 7 702 PSG1,PSG6,PSG7,PSG10,LOC100289650
SE_02_049200862 chr19:42871184-42901208 Sample_02_0492 Pharyng Detroit 562_LPS 862 9 1662 137 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_049100855 chr19:42871230-42901258 Sample_02_0491 Pharyng Detroit 562-Control 855 9 1659 136 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_064200550 chr19:42871309-42900959 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 550 14 1641 135 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_050000615 chr19:42871345-42900642 Sample_02_0500 Fetal lung IMR90_#2 615 15 1626 135 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7,PSG8,PSG3
SE_02_077000697 chr19:42871426-42901477 Sample_02_0770 Ovary OVCA429_shLuc 697 19 1656 135 0 5 291 PSG1,PSG6,LOC100289650,PSG10P,PSG7
SE_02_060500094 chr19:42871975-42890798 Sample_02_0605 Skin Skin Fibroblast_DMSO 94 1 1100 98 0 5 225 PSG1,PSG6,PSG10P,PSG7
SE_02_045100084 chr19:42872136-42890314 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 84 1 1058 97 0 5 201 PSG1,PSG6,PSG10P,PSG7
SE_02_116900902 chr19:42872138-42901137 Sample_02_1169 Biliary H69_TGF beta_16h_2 902 7 1583 132 0 5 201 PSG1,PSG6,PSG10P,PSG7
SE_02_056900901 chr19:42872146-42901290 Sample_02_0569 Periodontal ligament mesenchymal stem cell 901 15 1585 132 0 5 196 PSG1,PSG6,PSG10P,PSG7
SE_02_114900251 chr19:42872161-42900587 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 251 9 1551 131 0 5 192 PSG1,PSG6,PSG10P,PSG7
SE_02_094800370 chr19:42872166-42901324 Sample_02_0948 Pharyng Detroit562 370 7 1587 132 0 5 192 PSG1,PSG6,PSG10P,PSG7
SE_02_116700576 chr19:42872233-42901261 Sample_02_1167 Biliary H69_TGF Vehicle_1 576 11 1579 132 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_047900699 chr19:42872498-42900330 Sample_02_0479 Head and neck SCC25 699 16 1514 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_087900256 chr19:42872562-42900194 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 256 6 1499 127 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_136101184 chr19:42872590-42878028 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1184 1 334 20 0 2 45 PSG1,PSG6,PSG10P
SE_02_127900816 chr19:42872770-42900284 Sample_02_1279 Bone Mesenchymal stem cells 816 5 1496 127 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_063600113 chr19:42872809-42916083 Sample_02_0636 Skin BJ5ta 113 12 2428 191 1 7 610 PSG1,PSG6,PSG10P,PSG7
SE_02_088200490 chr19:42872834-42880073 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 490 1 479 41 0 5 186 PSG1,PSG6,PSG10P
SE_02_127100620 chr19:42872837-42880673 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 620 1 523 48 0 5 186 PSG1,PSG6,PSG10P
SE_02_154900282 chr19:42872849-42880870 Sample_02_1549 Gastrointestinal Stromal GIST-430B 282 1 535 49 0 5 186 PSG1,PSG6,PSG10P
SE_02_060600114 chr19:42872857-42888104 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 114 1 911 86 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_049900565 chr19:42872881-42900963 Sample_02_0499 Fetal lung IMR90 IR Senescence 565 10 1533 128 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8,PSG3
SE_02_154800539 chr19:42872886-42900600 Sample_02_1548 Gastrointestinal Stromal GIST-226 539 8 1512 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_087800219 chr19:42872914-42900526 Sample_02_0878 Ovary SVOG3e cells_noDox_control 219 5 1504 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_139900361 chr19:42872919-42901113 Sample_02_1399 Bone U2OS_siMLL3.1 361 11 1539 129 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_064000609 chr19:42872941-42900681 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 609 8 1514 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_076700569 chr19:42872990-42900548 Sample_02_0767 Ovary OVCA429 569 13 1501 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_158400563 chr19:42873004-42881162 Sample_02_1584 Brain U87 GBM_Mock 563 1 548 52 0 5 186 PSG1,PSG6,PSG10P
SE_02_135900481 chr19:42873019-42900522 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 481 13 1499 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_088000353 chr19:42873095-42900464 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 353 5 1494 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_158200314 chr19:42873268-42879092 Sample_02_1582 Renal OS-RC-2 314 1 381 31 0 5 96 PSG1,PSG6,PSG10P
SE_02_076000310 chr19:42873295-42915563 Sample_02_0760 Ovary BIN-67_SMARCA4 310 12 2364 182 1 7 597 PSG1,PSG6,PSG10P,PSG7
SE_02_113700259 chr19:42873322-42886416 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 259 1 811 82 0 5 186 PSG1,PSG6,PSG10P
SE_02_108500267 chr19:42873356-42890772 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 267 5 1020 93 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_144900222 chr19:42873375-42901437 Sample_02_1449 Adipose SW872_YAP_TFE3 222 7 1527 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_116600863 chr19:42873398-42901237 Sample_02_1166 Biliary H69_TGF beta_16h_1 863 8 1519 128 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_045200593 chr19:42873417-42881394 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 593 1 547 54 0 5 186 PSG1,PSG6,PSG10P
SE_02_061900336 chr19:42873429-42915350 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 336 15 2342 182 1 5 597 PSG1,PSG6,PSG10P,PSG7
SE_02_093800355 chr19:42873438-42915962 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 355 9 2384 188 1 7 597 PSG1,PSG6,PSG10P,PSG7
SE_02_158100084 chr19:42873463-42916039 Sample_02_1581 Renal OS-LM1 84 15 2391 189 1 7 607 PSG1,PSG6,PSG10P,PSG7
SE_02_093601015 chr19:42873478-42900144 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 1015 6 1446 123 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_113800699 chr19:42873487-42890388 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 699 6 992 92 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_088601809 chr19:42873503-42878043 Sample_02_0886 Skin foreskin_ p63KLF4 1809 1 283 18 0 2 46 PSG1,PSG6,PSG10P
SE_02_071200329 chr19:42873549-42900500 Sample_02_0712 Pancreas BxPC3_sgNEG 329 11 1470 126 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_158300497 chr19:42873556-42900443 Sample_02_1583 Fetal lung IMR90_empty_GM 497 12 1465 126 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8,PSG3
SE_02_088101002 chr19:42873612-42879660 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1002 1 409 36 0 5 147 PSG1,PSG6,PSG10P
SE_02_005400816 chr19:42873636-42916445 Sample_02_0054 Lung IMR-90_DMSO_1 816 8 2418 192 1 7 665 PSG1,PSG6,PSG10,PSG7
SE_02_072700168 chr19:42873662-42901007 Sample_02_0727 Fetal lung IMR90_Etoposide 168 5 1493 126 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8,PSG3
SE_02_145500503 chr19:42873670-42899396 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 503 7 1402 120 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_113900793 chr19:42873678-42890963 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 793 5 1014 92 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_088300736 chr19:42873689-42880062 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 736 1 433 39 0 5 186 PSG1,PSG6,PSG10P
SE_02_072100678 chr19:42873733-42900342 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 678 8 1452 126 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_125900906 chr19:42873737-42901737 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 906 11 1517 127 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_026900027 chr19:42873739-42900174 Sample_02_0269 Kidney HK-2 27 8 1435 125 0 5 186 PSG1,PSG10,PSG6,PSG7
SE_02_151000498 chr19:42873776-42901548 Sample_02_1510 Lung H3122_LR_Pano 498 9 1509 126 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_093900299 chr19:42873787-42900539 Sample_02_0939 Mammary gland MDA-MB-231_control 299 5 1460 125 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_135800648 chr19:42873798-42900595 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 648 8 1465 125 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_105400127 chr19:42873855-42901496 Sample_02_1054 Esophagus SKGT4 127 8 1504 125 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_145400439 chr19:42873880-42899997 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 439 9 1422 121 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_093000710 chr19:42873884-42916127 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 710 16 2376 188 1 7 623 PSG1,PSG6,PSG10P,PSG7,PSG8
SE_02_132800338 chr19:42873913-42898455 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 338 9 1355 114 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_043800567 chr19:42873919-42901250 Sample_02_0438 Bone HOS 567 13 1493 124 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_094600590 chr19:42873929-42900537 Sample_02_0946 Tongue HN12 590 8 1454 123 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_081100653 chr19:42873934-42900728 Sample_02_0811 Thyroid BCPAP 653 9 1468 123 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_049800520 chr19:42873957-42900334 Sample_02_0498 Fetal lung IMR90 Senescent_1 520 12 1441 123 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8,PSG3
SE_02_145200676 chr19:42873966-42899450 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 676 5 1392 118 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_043500236 chr19:42873976-42901673 Sample_02_0435 Kidney HEK293A_WT-MEF2B_DMSO_6h 236 4 1504 124 0 5 186 PSG1,PSG10,PSG6,PSG7
SE_02_048000233 chr19:42873986-42900275 Sample_02_0480 Gingival epithelial HGEP 233 13 1434 122 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_077101199 chr19:42874008-42898721 Sample_02_0771 Ovary OVCA429_shGRHL2 1199 10 1357 113 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_065300169 chr19:42874087-42900287 Sample_02_0653 Tracheobronchial epithelial HTBE_H5N1_03h 169 8 1428 120 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_137900564 chr19:42874090-42899999 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 564 6 1410 118 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_126900494 chr19:42874095-42901330 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 494 5 1486 122 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_107300220 chr19:42874113-42899565 Sample_02_1073 Keratinocyte keratinocytes stem cell 220 5 1382 115 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8
SE_02_064701150 chr19:42874197-42900032 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1150 10 1403 117 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_063700627 chr19:42874198-42900145 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 627 10 1406 119 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_144400393 chr19:42874233-42901051 Sample_02_1444 Adipose SW872_Empty Vector 393 8 1464 121 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_112100147 chr19:42874244-42899436 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 147 10 1373 115 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8
SE_02_147100944 chr19:42874255-42889280 Sample_02_1471 Blood Outgrowth Endothelia BOEC 944 5 876 79 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_124000553 chr19:42874300-42890792 Sample_02_1240 Skin MCC13_virus_negative 553 6 967 85 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_113300988 chr19:42874301-42899330 Sample_02_1133 Liver Hepatic stellate cells 988 3 1364 113 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_065201060 chr19:42874315-42900026 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1060 12 1396 116 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_139000045 chr19:42874340-42900296 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 45 8 1414 118 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_126800521 chr19:42874344-42907759 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 521 5 1822 139 0 5 460 PSG1,PSG6,PSG10P,PSG7
SE_02_072600438 chr19:42874378-42901181 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 438 9 1466 120 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_145100471 chr19:42874392-42900323 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 471 7 1412 118 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_01_011700610 chr19:42874424-42888802 Sample_01_0117 Lung fibroblast of lung 610 4 850 77 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8
SE_02_143500640 chr19:42874454-42914683 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 640 5 2236 172 1 5 597 PSG1,PSG6,PSG10P,PSG7
SE_02_060300539 chr19:42874543-42914573 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 539 6 2219 171 1 5 597 PSG1,PSG6,PSG10P,PSG7
SE_02_065600105 chr19:42874571-42898990 Sample_02_0656 Tracheobronchial epithelial HTBE_H5N1_mock 105 6 1332 111 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_151100581 chr19:42874588-42900830 Sample_02_1511 Lung H3122_untreated 581 11 1431 119 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_150900201 chr19:42874594-42900627 Sample_02_1509 Lung H3122_LR 201 8 1420 119 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_059000097 chr19:42874609-42901425 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 97 12 1454 120 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_071700761 chr19:42874609-42901652 Sample_02_0717 Pancreas HPAFII_GFP_DOX 761 8 1461 120 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_070700888 chr19:42874642-42899424 Sample_02_0707 Pancreas BxPC3 WT 888 12 1345 114 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_058800369 chr19:42874733-42901716 Sample_02_0588 Cervix HeLa Kyoto_untreated 369 11 1454 120 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_069700645 chr19:42874756-42890786 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 645 10 937 84 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_144600142 chr19:42874919-42900087 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 142 8 1360 115 0 5 186 PSG1,PSG6,PSG10P,PSG7
SE_02_112000302 chr19:42875058-42899468 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 302 12 1331 113 0 5 186 PSG1,PSG6,PSG10P,PSG7,PSG8
SE_02_080700121 chr19:42875936-42887762 Sample_02_0807 Pancreatic duct pancreatic epithelial cells_ARID1A_KO 121 2 738 74 0 5 186 PSG1,PSG6,PSG10P,PSG7
Genomic distribution of SEs associated with PSG1
Genome Browser

The strength of the tissue affected by the gene

Expression of PSG1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)