SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000121851
Gene: POLR3GL Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:145964690-145978848 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_001500794 chr1:145956549-145986664 Sample_00_0015 Lung IMR-90 794 4 151 51 1 297 1709 ANKRD34A,POLR3GL,LIX1L,PEX11B,RBM8A,HFE2,GNRHR2,TXNIP,ITGA10
SE_00_002300755 chr1:145956664-145980899 Sample_00_0023 Embryo mesenchymal-stem-cell 755 3 128 35 1 267 1709 ANKRD34A,POLR3GL,LIX1L,PEX11B,RBM8A,HFE2,GNRHR2,TXNIP,ITGA10
SE_02_035000464 chr1:145957367-145981029 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 464 8 124 35 1 250 1709 ANKRD34A,POLR3GL,LIX1L,PEX11B,RBM8A,HFE2,GNRHR2,TXNIP,ITGA10
SE_02_042300740 chr1:145959356-145985770 Sample_02_0423 Skin A375 740 7 135 48 1 236 1515 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP,ITGA10
SE_02_026500796 chr1:145960036-145986973 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 796 3 131 47 1 242 1413 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP,ITGA10
SE_02_005400910 chr1:145960039-145986809 Sample_02_0054 Lung IMR-90_DMSO_1 910 3 131 47 1 242 1413 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP,ITGA10
SE_02_104801642 chr1:145960155-145984641 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1642 8 123 40 1 223 1406 POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,TXNIP,ITGA10,HFE2
SE_00_002401098 chr1:145960183-145985880 Sample_00_0024 Embryo mesendoderm 1098 4 130 47 1 229 1401 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP
SE_02_005500874 chr1:145960184-145986782 Sample_02_0055 Lung IMR-90_Nutlin-3a 874 3 131 47 1 241 1401 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP
SE_02_043800227 chr1:145960205-145986488 Sample_02_0438 Bone HOS 227 6 131 47 1 241 1400 POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,TXNIP,HFE2
SE_02_147400252 chr1:145960213-145985550 Sample_02_1474 Bone CHLA-10 252 6 128 44 1 229 1398 POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,TXNIP,HFE2
SE_02_026300908 chr1:145960253-145985959 Sample_02_0263 Osteoblastic hFOB_undifferentiated 908 3 130 47 1 229 1386 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP
SE_02_126401028 chr1:145960361-145986751 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1028 4 131 47 1 239 1360 POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,TXNIP,HFE2
SE_02_135200795 chr1:145960501-145986480 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 795 5 131 47 1 226 1319 POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,TXNIP,HFE2
SE_02_084000765 chr1:145960604-145986672 Sample_02_0840 Embryo hNPCs_R1159Q/+ 765 7 131 47 1 221 1293 POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,TXNIP,HFE2
SE_02_127500516 chr1:145961048-145994274 Sample_02_1275 Prostate PC3_Vorinostat 516 14 175 69 1 213 1403 TXNIP,POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,HFE2
SE_02_011300276 chr1:145962221-145986974 Sample_02_0113 Connective tissue HT1080_DOX5d 276 3 127 46 1 138 954 ANKRD34A,POLR3GL,PEX11B,RBM8A,HFE2,LIX1L,GNRHR2,TXNIP
SE_02_108000175 chr1:145962227-145994815 Sample_02_1080 Muscle JR1 shCtrl 175 9 174 68 1 174 1247 TXNIP,POLR3GL,ANKRD34A,RBM8A,PEX11B,LIX1L,GNRHR2,HFE2
SE_00_004000910 chr1:145976957-145982825 Sample_00_0040 Spleen spleen_30y 910 1 36 8 0 57 321 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_00_003900526 chr1:145977031-145983865 Sample_00_0039 Spleen spleen_3y 526 1 41 12 0 62 308 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_00_000900789 chr1:145977047-145983948 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 789 1 41 14 0 62 305 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_00_004101169 chr1:145977069-145981191 Sample_00_0041 Stomach stomach_3y 1169 1 27 6 0 52 302 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_00_002700550 chr1:145977110-145982956 Sample_00_0027 Blood natural-killer-cell 550 1 36 9 0 57 297 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_01_003900453 chr1:145977365-145981175 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 453 1 25 6 0 51 257 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_00_003601516 chr1:145977431-145981127 Sample_00_0036 Small intestine small-intestine_108days 1516 1 24 6 0 51 237 POLR3GL,RBM8A,HFE2,ANKRD34A,LIX1L,TXNIP
SE_00_002500972 chr1:145977496-145981179 Sample_00_0025 Muscle of leg muscle-of-leg 972 1 24 6 0 50 225 POLR3GL,LIX1L,TXNIP,HFE2,ANKRD34A
SE_02_018600078 chr1:145977913-145980529 Sample_02_0186 Stomach AGS 78 2 18 5 0 39 158 POLR3GL,LIX1L,TXNIP,HFE2,ANKRD34A
SE_02_140200190 chr1:145978575-145980795 Sample_02_1402 Blood MM.1S_GNE-781 190 1 14 5 0 34 69 POLR3GL,ANKRD34A,HFE2,LIX1L,TXNIP
Genomic distribution of SEs associated with POLR3GL
Genome Browser

The strength of the tissue affected by the gene

Expression of POLR3GL

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)