SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000164530
Gene: PI16 Gene type: protein_coding
Strand: + External links:
Genomic region: chr6:36948263-36964837 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_056900893 chr6:36895376-36939618 Sample_02_0569 Periodontal ligament mesenchymal stem cell 893 24 1258 141 6 66 1165 C6ORF89,PI16,PPIL1,MTCH1
SE_02_063300243 chr6:36903618-36937156 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 243 12 979 109 5 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_074900579 chr6:36903760-36941398 Sample_02_0749 Mammary gland HCC1599_GSI 579 10 1143 130 5 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_063200256 chr6:36903963-36937202 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 256 16 966 108 5 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_074800829 chr6:36904024-36941104 Sample_02_0748 Mammary gland HCC1599_WO 829 8 1092 124 5 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_063400320 chr6:36904600-36937381 Sample_02_0634 Gastrointestinal Stromal GIST-48B_JQ1 320 16 954 104 4 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_092301097 chr6:36905490-36939269 Sample_02_0923 Heart fetal heart_PCW10_12522 1097 7 975 108 3 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_117300772 chr6:36905879-36981839 Sample_02_1173 Brain GBM01 772 22 2352 307 8 171 3271 C6ORF89,PI16,MTCH1,PPIL1,FGD2
SE_02_151400810 chr6:36906977-36927658 Sample_02_1514 Lung Differentiated AT1-like cells 810 8 594 58 2 43 814 C6ORF89,PI16,PPIL1
SE_02_135600197 chr6:36907454-36973482 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 197 11 2034 247 6 139 2745 C6ORF89,PI16,MTCH1,PPIL1,FGD2
SE_02_047401589 chr6:36907594-36951854 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1589 12 1392 165 2 50 1135 C6ORF89,PI16,PPIL1,MTCH1
SE_02_008900329 chr6:36907940-36939517 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 329 7 925 99 2 50 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_048101010 chr6:36911095-36962247 Sample_02_0481 Mammary gland MDA-MB231 1010 15 1596 191 2 96 1647 C6ORF89,PI16,PPIL1,MTCH1,FGD2
SE_02_124100687 chr6:36911907-36950286 Sample_02_1241 Skin MCC26_virus_negative 687 11 1234 152 0 47 1135 C6ORF89,PI16,PPIL1,MTCH1
SE_02_114200244 chr6:36912290-36939603 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 244 7 805 91 0 47 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_086800716 chr6:36913000-36939359 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 716 23 771 88 0 47 1054 C6ORF89,PI16,PPIL1,MTCH1
SE_02_086700915 chr6:36913095-36962103 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 915 25 1525 186 1 93 1624 C6ORF89,PI16,PPIL1,MTCH1,FGD2
SE_02_077501223 chr6:36932645-37003847 Sample_02_0775 Pancreas EndoC-BH1_SE 1223 14 2329 306 8 166 2528 PI16,MTCH1,FGD2,C6ORF89,COX6A1P2
SE_02_022600471 chr6:36945502-36987852 Sample_02_0226 Blood KOPTK1 471 5 1304 184 5 158 2528 MTCH1,PI16,FGD2
SE_02_089201354 chr6:36955752-36984381 Sample_02_0892 Heart left ventricle_LV1215 1354 11 884 132 4 108 1979 PI16,MTCH1,FGD2
SE_02_104801370 chr6:36956169-36970967 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1370 9 449 57 3 62 1347 PI16,MTCH1,FGD2
SE_02_104400438 chr6:36956418-36971850 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 438 9 475 62 3 62 1347 PI16,MTCH1,FGD2
Genomic distribution of SEs associated with PI16
Genome Browser

The strength of the tissue affected by the gene

Expression of PI16

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)