Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000239677
Gene: PDZRN3-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr3:73621713-73626796 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074700444 chr3:73571462-73625411 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 444 24 1507 62 1 242 350 PDZRN3-AS1,PDZRN3
SE_02_089100397 chr3:73572989-73626845 Sample_02_0891 Heart left ventricle_LV1202 397 24 1514 62 1 246 350 PDZRN3-AS1,PDZRN3
SE_02_092500420 chr3:73574622-73626181 Sample_02_0925 Heart fetal heart_PCW17_12570 420 19 1433 60 1 231 350 PDZRN3-AS1,PDZRN3
SE_02_091100265 chr3:73574624-73626144 Sample_02_0911 Heart left ventricle_DCM_LV1290 265 25 1432 60 1 231 350 PDZRN3-AS1,PDZRN3
SE_02_089400225 chr3:73575334-73626340 Sample_02_0894 Heart left ventricle_LV1248 225 18 1414 60 1 233 350 PDZRN3-AS1,PDZRN3
SE_02_090500482 chr3:73575393-73626187 Sample_02_0905 Heart left ventricle_DCM_LV1033 482 18 1411 60 1 230 350 PDZRN3-AS1,PDZRN3
SE_02_090300430 chr3:73575810-73627082 Sample_02_0903 Heart left ventricle_DCM_LV1009 430 22 1423 61 1 241 350 PDZRN3-AS1,PDZRN3
SE_02_090700378 chr3:73580158-73627244 Sample_02_0907 Heart left ventricle_DCM_LV1223 378 30 1299 46 1 239 350 PDZRN3-AS1,PDZRN3
SE_02_091900453 chr3:73580245-73624166 Sample_02_0919 Heart left ventricle_DCM_LV1532 453 24 1206 44 1 142 164 PDZRN3-AS1,PDZRN3
SE_02_053400530 chr3:73580803-73619441 Sample_02_0534 Blood vessel Circle of Willis_60y 530 13 1051 36 1 108 102 PDZRN3,PDZRN3-AS1
SE_02_092000432 chr3:73583057-73624315 Sample_02_0920 Heart left ventricle_DCM_LV1535 432 20 1144 40 1 159 183 PDZRN3-AS1,PDZRN3
SE_02_091700481 chr3:73583911-73624198 Sample_02_0917 Heart left ventricle_DCM_LV1433 481 21 1122 39 1 140 166 PDZRN3-AS1,PDZRN3
SE_02_092400508 chr3:73584752-73626137 Sample_02_0924 Heart fetal heart_PCW10_12569 508 19 1166 40 1 222 350 PDZRN3-AS1,PDZRN3
SE_02_092300492 chr3:73584778-73624295 Sample_02_0923 Heart fetal heart_PCW10_12522 492 18 1108 39 1 148 177 PDZRN3-AS1,PDZRN3
SE_02_090600633 chr3:73585291-73626371 Sample_02_0906 Heart left ventricle_DCM_LV1072 633 12 1156 40 1 224 350 PDZRN3-AS1,PDZRN3
SE_02_091400470 chr3:73585637-73624346 Sample_02_0914 Heart left ventricle_DCM_LV1342 470 14 1085 39 1 150 187 PDZRN3-AS1,PDZRN3
SE_02_091800481 chr3:73585793-73624227 Sample_02_0918 Heart left ventricle_DCM_LV1437 481 14 1077 39 1 136 169 PDZRN3-AS1,PDZRN3
SE_02_089000656 chr3:73585873-73626346 Sample_02_0890 Heart left ventricle_LV1200 656 16 1139 40 1 219 350 PDZRN3-AS1,PDZRN3
SE_02_089600944 chr3:73586329-73627384 Sample_02_0896 Heart left ventricle_LV1294 944 17 1157 41 1 222 350 PDZRN3-AS1,PDZRN3
SE_02_091600467 chr3:73586333-73624293 Sample_02_0916 Heart left ventricle_DCM_LV1392 467 15 1064 39 1 137 177 PDZRN3-AS1,PDZRN3
SE_02_155400466 chr3:73588697-73625851 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 466 13 1039 38 0 205 350 PDZRN3-AS1,PDZRN3
SE_02_118600789 chr3:73592219-73624276 Sample_02_1186 Brain GBM15 789 10 925 36 0 115 175 PDZRN3-AS1,PDZRN3
SE_02_118700773 chr3:73592316-73638289 Sample_02_1187 Brain GBM16 773 12 1324 43 0 243 350 PDZRN3-AS1,PDZRN3
SE_02_118500770 chr3:73592351-73626544 Sample_02_1185 Brain GBM14 770 11 990 37 0 195 350 PDZRN3-AS1,PDZRN3
SE_01_011000790 chr3:73597247-73638593 Sample_01_0110 Aorta thoracic aorta_37y 790 20 1200 42 0 240 350 PDZRN3-AS1,PDZRN3
SE_02_059400994 chr3:73598001-73637560 Sample_02_0594 iPSC-derived neural progenitors 994 9 1140 39 0 237 350 PDZRN3-AS1,PDZRN3
SE_02_083800081 chr3:73598488-73606070 Sample_02_0838 Embryo hNPCs_WT 81 3 223 10 0 29 49 PDZRN3,PDZRN3-AS1
SE_02_046600903 chr3:73598521-73638231 Sample_02_0466 Adipose visceral adipocytes 903 17 1142 40 0 239 350 PDZRN3-AS1,PDZRN3
SE_00_005700682 chr3:73598551-73627130 Sample_00_0057 Heart right ventricle 3y 682 9 828 35 0 196 350 PDZRN3-AS1,PDZRN3
SE_02_090900640 chr3:73599371-73626369 Sample_02_0909 Heart left ventricle_DCM_LV1264 640 16 772 32 0 188 350 PDZRN3-AS1,PDZRN3
SE_02_157100730 chr3:73599486-73633935 Sample_02_1571 Fibroblast Fibroblast cells 730 7 982 37 0 219 350 PDZRN3-AS1,PDZRN3
SE_02_135600500 chr3:73599522-73635215 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 500 4 1012 37 0 221 350 PDZRN3-AS1,PDZRN3
SE_02_047400485 chr3:73599599-73635143 Sample_02_0474 Fibroblast umbilical cord Fibroblast 485 10 1008 37 0 221 350 PDZRN3-AS1,PDZRN3
SE_02_046501122 chr3:73599687-73639337 Sample_02_0465 Adipose subcutaneous adipocytes 1122 19 1135 40 0 242 350 PDZRN3-AS1,PDZRN3
SE_01_010901028 chr3:73599785-73626123 Sample_01_0109 Colon transverse colon_54y 1028 9 755 32 0 185 350 PDZRN3-AS1,PDZRN3
SE_02_097900491 chr3:73599795-73638442 Sample_02_0979 Brain JN14-BS1_H3.3K27M 491 17 1102 39 0 240 350 PDZRN3-AS1,PDZRN3
SE_02_119900507 chr3:73599941-73626756 Sample_02_1199 Brain GBM35 507 5 763 33 0 192 350 PDZRN3-AS1,PDZRN3
SE_02_090001008 chr3:73599998-73626144 Sample_02_0900 Heart left ventricle_LV1452 1008 9 747 32 0 185 350 PDZRN3-AS1,PDZRN3
SE_02_089500581 chr3:73600032-73624726 Sample_02_0895 Heart left ventricle_LV1259 581 5 697 31 0 160 251 PDZRN3-AS1,PDZRN3
SE_02_093800553 chr3:73600073-73637757 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 553 15 1078 37 0 238 350 PDZRN3-AS1,PDZRN3
SE_01_009301292 chr3:73600101-73639353 Sample_01_0093 Aorta ascending aorta 1292 11 1121 39 0 242 350 PDZRN3-AS1,PDZRN3
SE_02_118100724 chr3:73600502-73639335 Sample_02_1181 Brain GBM10 724 6 1114 39 0 241 350 PDZRN3-AS1,PDZRN3
SE_02_088800819 chr3:73600526-73627115 Sample_02_0888 Heart left ventricle_LV1160 819 16 765 32 0 196 350 PDZRN3-AS1,PDZRN3
SE_01_009800770 chr3:73602923-73626779 Sample_01_0098 Heart left ventricle_51y 770 6 679 30 0 172 301 PDZRN3-AS1,PDZRN3
SE_02_053301010 chr3:73603829-73638489 Sample_02_0533 Blood vessel Circle of Willis_54y 1010 16 982 35 0 213 301 PDZRN3-AS1,PDZRN3

Genomic distribution of SEs associated with PDZRN3-AS1

The strength of the tissue affected by the gene


Expression of PDZRN3-AS1