SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000197822
Gene: OCLN Gene type: protein_coding
Strand: + External links:
Genomic region: chr5:69492292-69558104 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077502192 chr5:69443216-69520362 Sample_02_0775 Pancreas EndoC-BH1_SE 2192 18 1805 121 0 90 480 OCLN,GTF2H2B,MARVELD2
SE_01_008700267 chr5:69474094-69546061 Sample_01_0087 Thyroid gland thyroid-gland 267 12 1387 80 0 106 571 OCLN,GTF2H2D,GTF2H2C
SE_01_009000613 chr5:69476670-69532560 Sample_01_0090 Lung upper-lobe-of-left-lung 613 9 1229 70 0 91 461 OCLN,GTF2H2D,GTF2H2C
SE_02_017700324 chr5:69484897-69522755 Sample_02_0177 Urinary bladder J82 324 6 861 41 0 77 461 OCLN,GTF2H2D,GTF2H2C
SE_02_098901575 chr5:69485223-69547241 Sample_02_0989 Kidney kidney cortex_WT 1575 18 1161 64 0 107 571 OCLN,GTF2H2B
SE_02_061001063 chr5:69485475-69521817 Sample_02_0610 Liposarcoma MLS 1765-92 1063 10 830 41 0 77 461 OCLN,GTF2H2B
SE_02_075700447 chr5:69488140-69531526 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 447 12 978 50 0 79 461 OCLN,GTF2H2B
SE_02_075400110 chr5:69488272-69532049 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 110 9 982 50 0 81 461 OCLN,GTF2H2B
SE_02_003900638 chr5:69488486-69502968 Sample_02_0039 Embryo AFG 638 4 351 17 0 27 247 OCLN
SE_01_008500642 chr5:69488573-69544759 Sample_01_0085 Stomach stomach 642 7 1081 60 0 94 510 OCLN,GTF2H2D,GTF2H2C
SE_00_004200720 chr5:69488602-69503664 Sample_00_0042 Stomach stomach_30y 720 6 357 17 0 28 247 OCLN
SE_02_003300550 chr5:69488754-69554824 Sample_02_0033 Pancreas pancreatic-islets-F 550 10 1168 63 0 126 717 OCLN,GTF2H2D,GTF2H2C
SE_02_052400430 chr5:69488756-69543875 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 430 15 1077 60 0 88 509 OCLN,GTF2H2B
SE_02_004800606 chr5:69488785-69500515 Sample_02_0048 Embryo endodermal CyT49_HE 606 4 282 16 0 27 247 OCLN
SE_00_002000077 chr5:69488803-69543638 Sample_00_0020 Large intestine large-intestine_108d 77 9 1076 60 0 88 509 OCLN,GTF2H2D,GTF2H2C
SE_01_003700151 chr5:69488843-69528354 Sample_01_0037 Liver hepatocyte 151 7 904 45 0 75 461 OCLN,GTF2H2D,GTF2H2C
SE_00_003600103 chr5:69488868-69543529 Sample_00_0036 Small intestine small-intestine_108days 103 10 1076 60 0 88 509 OCLN,GTF2H2D,GTF2H2C
SE_02_049300333 chr5:69488989-69567736 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 333 15 1328 77 0 141 1318 GTF2H2C_2,GTF2H2C,OCLN,GTF2H2B
SE_01_007100148 chr5:69489036-69521828 Sample_01_0071 Pancreas body-of-pancreas 148 7 772 38 0 73 461 OCLN,GTF2H2D,GTF2H2C
SE_01_010101182 chr5:69489080-69531276 Sample_01_0101 Pancreas pancreas_54y 1182 9 956 50 0 76 461 OCLN,GTF2H2B
SE_02_081900488 chr5:69489104-69543922 Sample_02_0819 Ovary Mucinous ovarian cancer 488 11 1072 60 0 85 509 OCLN,GTF2H2B
SE_02_137100818 chr5:69489248-69527887 Sample_02_1371 Pancreas Patu899S-untreated 818 16 887 45 0 71 461 OCLN,GTF2H2B
SE_02_032600950 chr5:69489496-69519846 Sample_02_0326 Liver hepatocytes_d3 950 4 712 36 0 67 461 OCLN,GTF2H2D,GTF2H2C
SE_02_071100491 chr5:69489594-69531191 Sample_02_0711 Pancreas hN35_organoid 491 14 941 49 0 72 461 OCLN,GTF2H2B
SE_02_032500961 chr5:69489625-69520297 Sample_02_0325 Liver hepatocytes_d1 961 5 723 36 0 67 461 OCLN,GTF2H2D,GTF2H2C
SE_02_032700570 chr5:69489687-69521161 Sample_02_0327 Liver hepatocytes_d6 570 6 737 37 0 67 461 OCLN,GTF2H2D,GTF2H2C
SE_02_020500253 chr5:69490235-69525681 Sample_02_0205 Stomach Gastric_Primary_Sample_T 253 11 819 42 0 67 461 OCLN,GTF2H2D,GTF2H2C
SE_02_074900871 chr5:69491134-69502128 Sample_02_0749 Mammary gland HCC1599_GSI 871 3 277 12 0 21 247 OCLN
SE_01_005900205 chr5:69491136-69522394 Sample_01_0059 Lung PC-9 205 5 739 34 0 67 461 OCLN,GTF2H2D,GTF2H2C
SE_02_074801009 chr5:69491144-69502112 Sample_02_0748 Mammary gland HCC1599_WO 1009 4 274 12 0 21 247 OCLN
SE_02_032200794 chr5:69491226-69520304 Sample_02_0322 Colon Caco-2 794 3 694 33 0 66 461 OCLN,GTF2H2D,GTF2H2C
SE_02_023600419 chr5:69491227-69503161 Sample_02_0236 Colon V206 419 3 297 13 0 22 247 OCLN
SE_02_009900514 chr5:69491608-69528508 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 514 6 852 42 0 66 461 OCLN,GTF2H2D,GTF2H2C
SE_02_035500345 chr5:69491647-69503710 Sample_02_0355 Colon HCT15 345 3 296 13 0 19 247 OCLN
SE_01_007900990 chr5:69491689-69526683 Sample_01_0079 Peyers patch Peyers-patch 990 7 806 41 0 66 461 OCLN,GTF2H2D,GTF2H2C
SE_02_035400569 chr5:69491731-69521790 Sample_02_0354 Colon Colo205 569 6 716 34 0 64 461 OCLN,GTF2H2D,GTF2H2C
SE_02_004500481 chr5:69491747-69494358 Sample_02_0045 Embryo endodermal CyT49_ES_D7 481 1 86 5 0 18 247 OCLN
SE_02_045300634 chr5:69491768-69518440 Sample_02_0453 Neuroblastoma SJNB3 634 8 633 30 0 63 461 OCLN,GTF2H2B
SE_02_004600520 chr5:69491802-69494522 Sample_02_0046 Embryo endodermal CyT49_ES_D10 520 1 91 4 0 18 247 OCLN
SE_02_012400880 chr5:69491962-69536357 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 880 6 995 55 0 79 509 OCLN,GTF2H2D,GTF2H2C
SE_02_015000487 chr5:69492144-69521785 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 487 5 707 33 0 64 456 OCLN,GTF2H2D,GTF2H2C
SE_02_151300768 chr5:69493854-69521380 Sample_02_1513 Lung Transitional AT2->1 cells 768 7 642 30 0 50 214 OCLN,GTF2H2B,GTF2H2C
SE_02_151400888 chr5:69493966-69521352 Sample_02_1514 Lung Differentiated AT1-like cells 888 10 637 30 0 45 214 OCLN,GTF2H2B,GTF2H2C
SE_02_151200529 chr5:69494344-69521592 Sample_02_1512 Lung Purified AT2 cells 529 10 623 29 0 45 214 OCLN,GTF2H2B,GTF2H2C
SE_02_071000870 chr5:69494651-69521134 Sample_02_0710 Pancreas hN34_organoid 870 8 602 29 0 45 214 OCLN,GTF2H2B
SE_02_153300544 chr5:69494840-69521465 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 544 11 609 29 0 45 214 OCLN,GTF2H2B,GTF2H2C
SE_02_123100459 chr5:69496899-69521808 Sample_02_1231 Lung PC9_siMED13L-1 459 9 575 28 0 46 214 OCLN,GTF2H2B
SE_02_123000776 chr5:69497546-69527954 Sample_02_1230 Lung PC9 776 11 679 34 0 48 214 OCLN,GTF2H2B
SE_02_009700841 chr5:69498913-69518671 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 841 5 447 21 0 45 214 OCLN,GTF2H2D,GTF2H2C
Genomic distribution of SEs associated with OCLN
Genome Browser

The strength of the tissue affected by the gene

Expression of OCLN

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)