Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000156642 |
| Gene: | NPTN | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr15:73560014-73634134 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_108300362 | chr15:73583868-73636450 |
Sample_02_1083 | Macula | macula | 362 | 21 | 1131 | 61 | 1 | 264 | 442 | NPTN,CD276,NPTN-IT1 |
| SE_02_044400941 | chr15:73584848-73635606 |
Sample_02_0444 | Bone | osteosarcoma tumor P10 | 941 | 18 | 1085 | 58 | 1 | 263 | 442 | NPTN,CD276,NPTN-IT1 |
| SE_02_101701480 | chr15:73584915-73634951 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 1480 | 13 | 1066 | 57 | 1 | 263 | 442 | NPTN,CD276,NPTN-IT1 |
| SE_02_108200533 | chr15:73590514-73634280 |
Sample_02_1082 | Retina | retina | 533 | 19 | 937 | 53 | 1 | 249 | 385 | NPTN,CD276,NPTN-IT1 |
| SE_02_021101202 | chr15:73591136-73603719 |
Sample_02_0211 | Lung | MRC-5_NFD_1DPT | 1202 | 3 | 277 | 13 | 1 | 152 | 186 | NPTN |
| SE_02_021000475 | chr15:73591229-73625023 |
Sample_02_0210 | Lung | MRC-5_N_1DPT | 475 | 6 | 730 | 42 | 1 | 192 | 186 | NPTN |
| SE_02_006500060 | chr15:73593186-73634701 |
Sample_02_0065 | Embryo | KO2-Late_G1 | 60 | 8 | 899 | 50 | 0 | 224 | 301 | NPTN,CD276 |
| SE_02_001800145 | chr15:73595748-73604793 |
Sample_02_0018 | Embryo | NEC | 145 | 2 | 217 | 9 | 0 | 88 | 102 | NPTN |
| SE_02_006700071 | chr15:73596506-73633020 |
Sample_02_0067 | Embryo | AzH-G2/M | 71 | 6 | 790 | 47 | 0 | 152 | 118 | NPTN |
| SE_02_098901722 | chr15:73598403-73638231 |
Sample_02_0989 | Kidney | kidney cortex_WT | 1722 | 12 | 885 | 50 | 0 | 124 | 199 | NPTN,CD276,NPTN-IT1 |
| SE_02_103601010 | chr15:73599311-73652892 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 1010 | 16 | 1237 | 74 | 1 | 127 | 199 | NPTN,CD276,NPTN-IT1 |
| SE_01_002100494 | chr15:73599692-73633342 |
Sample_01_0021 | Skin | bipolar-neuron | 494 | 4 | 744 | 44 | 0 | 92 | 130 | NPTN |
| SE_02_142901136 | chr15:73600417-73633942 |
Sample_02_1429 | Blood | GM12878_WT | 1136 | 12 | 740 | 43 | 0 | 111 | 199 | NPTN,NPTN-IT1 |
| SE_02_081800698 | chr15:73601128-73638292 |
Sample_02_0818 | Ovary | High-grade serous ovarian cancer | 698 | 11 | 815 | 47 | 0 | 120 | 199 | NPTN,CD276,NPTN-IT1 |
| SE_02_006600035 | chr15:73601385-73632997 |
Sample_02_0066 | Embryo | AzL-S_phase | 35 | 5 | 681 | 42 | 0 | 83 | 11 | NPTN |
| SE_02_006400319 | chr15:73616616-73633090 |
Sample_02_0064 | Embryo | DN-Early_G1 | 319 | 6 | 336 | 24 | 0 | 60 | 42 | NPTN |
| SE_02_151100631 | chr15:73624030-73635712 |
Sample_02_1511 | Lung | H3122_untreated | 631 | 5 | 246 | 14 | 0 | 72 | 199 | NPTN,CD276 |
| SE_02_135900512 | chr15:73626331-73651452 |
Sample_02_1359 | Other | IC8-deltaEGF-L1596H_GSI_4h | 512 | 11 | 595 | 35 | 1 | 70 | 199 | NPTN,CD276 |
| SE_02_126401272 | chr15:73628432-73639613 |
Sample_02_1264 | Bone | Im-GCT-4072_G34W KO | 1272 | 5 | 241 | 13 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_126701491 | chr15:73628565-73637644 |
Sample_02_1267 | Bone | Im-GCT-4072_G34W | 1491 | 3 | 198 | 11 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_126301580 | chr15:73628853-73638278 |
Sample_02_1263 | Bone | Im-GCT-4072_G34W unedited | 1580 | 3 | 203 | 11 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_116700986 | chr15:73628981-73640245 |
Sample_02_1167 | Biliary | H69_TGF Vehicle_1 | 986 | 4 | 255 | 13 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_116801132 | chr15:73629023-73640217 |
Sample_02_1168 | Biliary | H69_TGF Vehicle_2 | 1132 | 5 | 254 | 13 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_126501223 | chr15:73630386-73640484 |
Sample_02_1265 | Bone | Im-GCT-4072_G34W-repair_WT_D6 | 1223 | 3 | 230 | 10 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_125901052 | chr15:73630880-73638186 |
Sample_02_1259 | Bone | Im-GCT-3504_G34W-repair_WT_4C7 | 1052 | 3 | 160 | 7 | 0 | 62 | 199 | NPTN,CD276 |
| SE_02_043800622 | chr15:73631377-73648227 |
Sample_02_0438 | Bone | HOS | 622 | 11 | 402 | 26 | 1 | 59 | 199 | NPTN,CD276 |
| SE_02_094500400 | chr15:73636818-73655950 |
Sample_02_0945 | Brain | SF767 | 400 | 7 | 461 | 31 | 1 | 9 | 0 | CD276,NPTN |
Genomic distribution of SEs associated with NPTN