SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000185864
Gene: NPIPB4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:21834569-21880827 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104300856 chr16:21798719-21887157 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 856 26 1144 61 0 22 2071 LOC100190986,RRN3P1,NPIPB4
SE_02_104700594 chr16:21802002-21948413 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 594 50 1648 79 0 283 2559 LOC100190986,RRN3P1,NPIPB4,UQCRC2
SE_02_111200168 chr16:21834565-21937632 Sample_02_1112 T lymphocyte THP-6 T-ALL 168 28 556 20 0 232 2079 LOC100190986,NPIPB4,RRN3P1,UQCRC2
SE_02_103602255 chr16:21842248-21930961 Sample_02_1036 Mammary gland HCC70_XY018 2255 34 362 12 0 232 1447 LOC100190986,NPIPB4,RRN3P1,UQCRC2
SE_02_065201166 chr16:21846008-21887512 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1166 13 137 8 0 23 783 LOC100190986,NPIPB4,RRN3P1
SE_02_156900757 chr16:21846073-21889795 Sample_02_1569 Endothelial Endothelial cells 757 6 139 8 0 64 955 LOC100190986,NPIPB4,RRN3P1
SE_02_064701187 chr16:21846389-21887467 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1187 10 137 8 0 22 781 LOC100190986,NPIPB4,RRN3P1
SE_02_130000066 chr16:21848012-21936712 Sample_02_1300 Blood KARPAS-45 66 18 464 19 0 232 1310 LOC100190986,NPIPB4,RRN3P1,UQCRC2
Genomic distribution of SEs associated with NPIPB4
Genome Browser

The strength of the tissue affected by the gene

Expression of NPIPB4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)