SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000145494
Gene: NDUFS6 Gene type: protein_coding
Strand: + External links:
Genomic region: chr5:1801407-1816048 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700451 chr5:1772206-1832921 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 451 25 1988 279 2 76 543 NDUFS6,MRPL36,LOC101929034,IRX4
SE_02_074600173 chr5:1782605-1843028 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 173 19 2057 262 2 96 543 NDUFS6,MRPL36,LOC101929034,CTD-2194D22.4,IRX4
SE_02_104900977 chr5:1787654-1814922 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 977 20 914 119 2 22 461 NDUFS6,MRPL36,LOC101929034
SE_02_072700495 chr5:1788434-1812982 Sample_02_0727 Fetal lung IMR90_Etoposide 495 5 829 112 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_042200217 chr5:1788461-1814286 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 217 5 863 117 2 12 410 NDUFS6,MRPL36
SE_02_139200522 chr5:1788730-1819918 Sample_02_1392 Peripheral blood Mac-2A_ALK- 522 8 1041 140 2 25 543 NDUFS6,MRPL36,LOC101929034
SE_02_141001313 chr5:1788859-1813466 Sample_02_1410 Brain GSC6 1313 3 831 113 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_094600561 chr5:1789496-1813695 Sample_02_0946 Tongue HN12 561 4 811 113 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_064500378 chr5:1789792-1812942 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 378 5 784 110 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_120000791 chr5:1789893-1813059 Sample_02_1200 Brain GBM36 791 7 789 110 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_117400422 chr5:1790207-1813743 Sample_02_1174 Brain GBM02 422 15 795 112 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_103600221 chr5:1791605-1813020 Sample_02_1036 Mammary gland HCC70_XY018 221 7 744 108 2 11 400 NDUFS6,MRPL36,LOC101929034
SE_02_035400668 chr5:1791957-1811269 Sample_02_0354 Colon Colo205 668 3 696 100 2 11 400 NDUFS6,MRPL36
SE_02_133500150 chr5:1792583-1809783 Sample_02_1335 Lung NCI-H1299_wtSMARCA4_Dox 150 5 623 98 2 10 400 NDUFS6,MRPL36,LOC101929034
SE_02_066001052 chr5:1792585-1813796 Sample_02_0660 Mammary gland MCF10DCIS 1052 8 739 110 2 10 400 NDUFS6,MRPL36,LOC101929034
SE_02_005600943 chr5:1793101-1810634 Sample_02_0056 Mammary gland HMEC 943 4 645 99 2 10 400 NDUFS6,MRPL36
SE_02_016600558 chr5:1797471-1805294 Sample_02_0166 Mammary gland HCC1954_Parental 558 1 280 53 1 8 400 NDUFS6,MRPL36
SE_02_016700526 chr5:1797471-1805294 Sample_02_0167 Mammary gland HCC1954_LCC2 526 1 280 53 1 8 400 NDUFS6,MRPL36
SE_01_002300357 chr5:1833493-1843188 Sample_01_0023 Embryo cardiac-muscle-cell 357 1 360 44 0 37 0 MRPL36,IRX4,NDUFS6
Genomic distribution of SEs associated with NDUFS6
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The strength of the tissue affected by the gene

Expression of NDUFS6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)