SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000124920
Gene: MYRF Gene type: protein_coding
Strand: + External links:
Genomic region: chr11:61752636-61788518 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_047700116 chr11:61681396-61758632 Sample_02_0477 Colon intestinal epithelial organoids_139a 116 15 2033 159 70 563 3576 DAGLA,DKFZP434K028,MYRF,MIR611,TMEM258,FEN1
SE_02_047800221 chr11:61682314-61757900 Sample_02_0478 Colon normal colon mucosa 221 19 1979 156 68 559 3576 DAGLA,DKFZP434K028,MYRF,MIR611,TMEM258,FEN1
SE_02_123500087 chr11:61682328-61776473 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 87 31 2495 183 85 760 4661 DAGLA,DKFZP434K028,MYRF,MIR611,FADS2,TMEM258,FADS1,MIR1908,FEN1
SE_02_105100038 chr11:61682392-61758104 Sample_02_1051 Esophagus Eso26 38 16 1984 156 68 559 3576 DAGLA,DKFZP434K028,MYRF,MIR611,TMEM258,FEN1
SE_02_115100144 chr11:61682393-61790013 Sample_02_1151 Mammary gland MCF-7_UNTR 144 59 2817 204 99 862 6899 DAGLA,DKFZP434K028,MYRF,TMEM258,FADS2,MIR611,FADS1,MIR1908,FEN1
SE_02_120200217 chr11:61683660-61776306 Sample_02_1202 Brain GBM38 217 23 2460 180 82 732 4620 DAGLA,DKFZP434K028,MYRF,MIR611,FADS2,TMEM258,FADS1,MIR1908,FEN1
SE_02_138500195 chr11:61684647-61781837 Sample_02_1385 Other iPSCs 195 37 2568 188 90 769 5822 DAGLA,DKFZP434K028,MYRF,FADS2,MIR611,TMEM258,FADS1,MIR1908,FEN1
SE_02_101500118 chr11:61684689-61781400 Sample_02_1015 Embryo H9_ Undifferentiated 118 25 2559 186 88 763 5716 DAGLA,DKFZP434K028,MYRF,FADS2,MIR611,TMEM258,FADS1,MIR1908,FEN1
SE_02_054200202 chr11:61686284-61783364 Sample_02_0542 Brain Kelly_ResJQ1 202 40 2559 188 91 765 5858 DAGLA,DKFZP434K028,MYRF,FADS2,MIR611,TMEM258,FADS1,MIR1908,FEN1
SE_02_103600785 chr11:61687352-61777929 Sample_02_1036 Mammary gland HCC70_XY018 785 30 2395 173 82 709 5018 DAGLA,DKFZP434K028,MYRF,MIR611,FADS2,TMEM258,FADS1,MIR1908,FEN1
SE_02_088600122 chr11:61687424-61782505 Sample_02_0886 Skin foreskin_ p63KLF4 122 30 2511 184 90 740 5851 DAGLA,DKFZP434K028,MYRF,FADS2,MIR611,TMEM258,FADS1,MIR1908,FEN1
SE_02_054400177 chr11:61688384-61781841 Sample_02_0544 Brain Kelly_ResVeh 177 30 2473 181 89 739 5823 DAGLA,DKFZP434K028,MYRF,FADS2,MIR611,TMEM258,FADS1,MIR1908,FEN1
SE_02_046200042 chr11:61689959-61746292 Sample_02_0462 Lung NCI-H2171 cells 42 21 1490 113 51 392 2673 DAGLA,DKFZP434K028,MIR611,MYRF,TMEM258,FEN1
SE_02_093100520 chr11:61693537-61745923 Sample_02_0931 Embryo H9 UTXKO 520 12 1390 102 49 362 2582 DAGLA,DKFZP434K028,MIR611,MYRF,TMEM258,FEN1
SE_02_143201605 chr11:61695899-61746264 Sample_02_1432 Bone A673 STAG2 WT 1605 19 1346 101 47 359 2666 DAGLA,DKFZP434K028,MIR611,MYRF,TMEM258,FEN1
SE_02_138400371 chr11:61695933-61745961 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 371 13 1330 99 46 357 2588 DAGLA,DKFZP434K028,MIR611,MYRF,TMEM258,FEN1
SE_02_095500366 chr11:61711184-61734324 Sample_02_0955 Brain IDH1_2469 366 9 591 45 21 145 851 DAGLA,MYRF,DKFZP434K028
SE_02_116000478 chr11:61712474-61745712 Sample_02_1160 Embryo H1_shLuc 478 10 876 66 36 255 2529 DAGLA,DKFZP434K028,MIR611,MYRF,TMEM258,FEN1,C11ORF10
SE_02_103000465 chr11:61713538-61777451 Sample_02_1030 Colon DKO 465 34 1697 122 65 555 4883 DAGLA,DKFZP434K028,MYRF,MIR611,FADS2,TMEM258,FADS1,MIR1908,FEN1
SE_02_111101102 chr11:61724351-61733490 Sample_02_1111 Other HGrC1_SMAD2/3KO 1102 1 231 10 4 60 404 DAGLA,MYRF,DKFZP434K028
SE_02_125800725 chr11:61726947-61772935 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 725 11 1243 88 48 432 3854 DAGLA,DKFZP434K028,MYRF,MIR611,FADS2,TMEM258,FADS1,MIR1908,FEN1
SE_02_119400586 chr11:61732127-61776762 Sample_02_1194 Brain GBM28 586 13 1207 85 49 428 3883 DAGLA,DKFZP434K028,MYRF,MIR611,FADS2,TMEM258,FADS1,MIR1908,FEN1
SE_02_067200488 chr11:61742397-61761829 Sample_02_0672 Endometrium endometrium cancer_DSG 488 8 535 44 19 174 1621 DAGLA,DKFZP434K028,MYRF,MIR611,TMEM258,FEN1
SE_02_117300750 chr11:61747043-61752525 Sample_02_1173 Brain GBM01 750 1 143 15 5 21 52 DKFZP434K028,MIR611,TMEM258,MYRF,FEN1
SE_02_120500382 chr11:61747103-61763763 Sample_02_1205 Brain NB3 382 1 442 37 16 115 736 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1,FADS2,FADS1
SE_02_098800803 chr11:61747375-61764739 Sample_02_0988 Blood K562_EPZ 803 4 469 37 18 140 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_067400351 chr11:61747389-61759859 Sample_02_0674 Endometrium E1_FA 351 5 320 27 13 80 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_118900273 chr11:61747396-61763376 Sample_02_1189 Brain GBM22 273 6 422 32 15 115 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_100300028 chr11:61747421-61762989 Sample_02_1003 Brain Lateral temporal lobe_19T_Young 28 5 407 32 14 106 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_096600517 chr11:61747518-61765387 Sample_02_0966 Brain H3.3K27M_JN29-BS3 517 9 476 36 17 141 717 MYRF,DKFZP434K028,MIR611,TMEM258,MIR1908,FEN1
SE_02_100500058 chr11:61747524-61763099 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 58 7 407 32 14 114 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_100000102 chr11:61748070-61764977 Sample_02_1000 Brain Lateral temporal lobe_15T_Young 102 9 461 34 16 139 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_096000357 chr11:61749307-61762741 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 357 3 360 27 11 102 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_121100705 chr11:61751940-61760047 Sample_02_1211 Brain GBM21 705 1 208 18 9 59 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_04_000600311 chr11:61752347-61758601 Sample_04_0006 Lung A549 GFP control 311 1 159 14 8 59 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_077501888 chr11:61752385-61758595 Sample_02_0775 Pancreas EndoC-BH1_SE 1888 1 158 13 7 59 717 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_119800700 chr11:61752625-61759430 Sample_02_1198 Brain GBM34 700 1 177 15 9 56 655 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_120301090 chr11:61752665-61758899 Sample_02_1203 Brain NB1 1090 1 162 14 8 51 645 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
SE_02_102900873 chr11:61752693-61759701 Sample_02_1029 Colon HCT116 873 1 185 16 9 44 631 MYRF,DKFZP434K028,MIR611,TMEM258,FEN1
Genomic distribution of SEs associated with MYRF
Genome Browser

The strength of the tissue affected by the gene

Expression of MYRF

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)