SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000283876
Gene: MIR4260 Gene type: miRNA
Strand: - External links:
Genomic region: chr1:209623444-209623510 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_120500644 chr1:209583663-209643985 Sample_02_1205 Brain NB3 644 21 1948 126 4 247 3105 LAMB3,CAMK1G,MIR4260,HSD11B1,G0S2
SE_02_139100432 chr1:209586560-209673395 Sample_02_1391 Peripheral blood FE-PD_ALK- 432 17 2777 184 6 309 3397 LAMB3,CAMK1G,MIR4260,HSD11B1,G0S2
SE_02_141000582 chr1:209601977-209651672 Sample_02_1410 Brain GSC6 582 12 1658 103 4 217 3155 LAMB3,CAMK1G,MIR4260,HSD11B1,G0S2
SE_02_151000104 chr1:209606734-209660572 Sample_02_1510 Lung H3122_LR_Pano 104 37 1792 110 4 249 3052 LAMB3,CAMK1G,MIR4260,HSD11B1,G0S2
SE_02_039600373 chr1:209607064-209659205 Sample_02_0396 Skin NHEK-D 373 22 1728 107 4 247 3052 CAMK1G,LAMB3,MIR4260,G0S2,HSD11B1
SE_02_036700254 chr1:209609694-209649792 Sample_02_0367 Skeletal muscle NS129 254 9 1314 74 3 185 2537 CAMK1G,LAMB3,MIR4260,G0S2,HSD11B1
SE_02_036800398 chr1:209610566-209646129 Sample_02_0368 Skeletal muscle NS134 398 8 1155 58 3 175 2482 CAMK1G,LAMB3,MIR4260,G0S2,HSD11B1
SE_01_009401014 chr1:209610795-209649382 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 1014 10 1274 71 3 182 2482 LAMB3,CAMK1G,MIR4260,HSD11B1,G0S2
SE_02_104602402 chr1:209611689-209638052 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2402 12 892 44 3 140 2305 LAMB3,CAMK1G,MIR4260,HSD11B1,G0S2
SE_02_021600248 chr1:209615375-209657942 Sample_02_0216 Skin NHEK_scramble 248 8 1399 89 3 209 2254 LAMB3,MIR4260,CAMK1G,G0S2,HSD11B1
SE_02_088901267 chr1:209616395-209649424 Sample_02_0889 Heart left ventricle_LV1183 1267 11 1093 60 1 159 1821 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_147500219 chr1:209616420-209631932 Sample_02_1475 Bone CHLA-25 219 1 527 24 1 102 1387 LAMB3,MIR4260,CAMK1G,G0S2
SE_00_004600696 chr1:209616438-209646575 Sample_00_0046 Heart right ventricle_34y 696 19 986 48 1 152 1814 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_089201055 chr1:209616462-209649319 Sample_02_0892 Heart left ventricle_LV1215 1055 12 1085 60 1 159 1809 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_089601090 chr1:209616469-209649487 Sample_02_0896 Heart left ventricle_LV1294 1090 12 1094 60 1 159 1807 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_090801252 chr1:209616525-209649936 Sample_02_0908 Heart left ventricle_DCM_LV1262 1252 12 1111 62 1 159 1815 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_148100119 chr1:209617278-209633475 Sample_02_1481 Bone MIC 119 1 558 25 1 106 1466 LAMB3,MIR4260,CAMK1G,G0S2
SE_02_128000841 chr1:209617775-209630008 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 841 1 428 18 1 84 1075 LAMB3,MIR4260,CAMK1G,G0S2
SE_02_079800141 chr1:209617854-209653013 Sample_02_0798 Brain 1919 141 9 1180 71 1 182 2013 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_085700335 chr1:209617910-209653994 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 335 5 1204 72 1 190 2002 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_070100147 chr1:209618065-209643853 Sample_02_0701 Bone David_TC32 147 9 850 46 1 140 1600 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_085500116 chr1:209618065-209653955 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 116 6 1200 72 1 189 1966 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_119301194 chr1:209618232-209650669 Sample_02_1193 Brain GBM27 1194 7 1078 65 1 164 1676 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_118600999 chr1:209618246-209650655 Sample_02_1186 Brain GBM15 999 9 1077 65 1 164 1676 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_097900149 chr1:209618469-209654730 Sample_02_0979 Brain JN14-BS1_H3.3K27M 149 17 1199 73 1 196 1907 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_074100159 chr1:209618689-209651829 Sample_02_0741 Muscle RH30 159 6 1090 68 0 161 1752 LAMB3,MIR4260,CAMK1G,HSD11B1,G0S2
SE_02_148400228 chr1:209620035-209628232 Sample_02_1484 Bone Rh1 228 5 298 12 0 60 806 LAMB3,MIR4260,CAMK1G,G0S2
SE_02_156500473 chr1:209625351-209644844 Sample_02_1565 Gastrointestinal Stromal Gastrointestinal stromal tumor 473 7 628 36 0 102 1109 LAMB3,CAMK1G,HSD11B1,MIR4260,G0S2
Genomic distribution of SEs associated with MIR4260
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR4260

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)