SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000266509
Gene: MIR3934 Gene type: miRNA
Strand: + External links:
Genomic region: chr6:33698128-33698234 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077900277 chr6:33619277-33704495 Sample_02_0779 Lymphoma U2932 277 47 2408 402 65 499 6290 MIR3934,ITPR3,UQCC2,GGNBP1,BAK1,IP6K3,LINC00336
SE_02_045400850 chr6:33668251-33700627 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 850 6 996 159 29 323 4578 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_151900444 chr6:33671445-33702312 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 444 20 950 157 27 277 4128 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_045201106 chr6:33673249-33702419 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 1106 9 910 154 27 267 3989 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_088500597 chr6:33678330-33700630 Sample_02_0885 Blood NALM6_2 597 3 724 125 21 226 3321 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_075800619 chr6:33678743-33700620 Sample_02_0758 Peripheral blood REH 619 4 709 123 21 214 3226 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_125100379 chr6:33678893-33709914 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 379 9 990 177 29 231 3314 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_125200496 chr6:33683371-33709605 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 496 11 837 133 24 187 2831 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_125000459 chr6:33683415-33709848 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 459 8 844 135 24 188 2857 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_124900430 chr6:33683610-33710086 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 430 10 846 134 23 188 2833 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_104700897 chr6:33690770-33696531 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 897 1 193 36 9 39 911 ITPR3,MIR3934,UQCC2
SE_02_079800318 chr6:33691221-33697121 Sample_02_0798 Brain 1919 318 1 196 35 9 36 922 ITPR3,UQCC2,IP6K3,MIR3934
SE_02_108200698 chr6:33691358-33712287 Sample_02_1082 Retina retina 698 6 666 110 23 99 1570 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_048900427 chr6:33692183-33697675 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 427 5 187 30 8 21 870 ITPR3,UQCC2,IP6K3,MIR3934
SE_02_152000396 chr6:33692249-33700676 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 396 6 266 38 13 38 1119 MIR3934,ITPR3,UQCC2,IP6K3
SE_02_048400462 chr6:33692499-33697230 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 462 5 162 25 5 21 788 ITPR3,UQCC2,IP6K3,MIR3934
SE_02_123700715 chr6:33694432-33712363 Sample_02_1237 Skin MKL2_virus_positive 715 5 566 88 16 75 1177 MIR3934,ITPR3,UQCC2,IP6K3
Genomic distribution of SEs associated with MIR3934
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR3934

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)