SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: METT5D1 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_017200199 chr11:28071531-28147654 Sample_02_0172 Lung IMR-90_quiescent 199 10 1759 103 1 173 606 METT5D1,KIF18A,MIR610
SE_02_021000880 chr11:28104176-28123743 Sample_02_0210 Lung MRC-5_N_1DPT 880 4 477 39 0 58 293 METT5D1,KIF18A,MIR610
SE_02_002600390 chr11:28107102-28111349 Sample_02_0026 Blood CD4donorE 390 1 103 6 0 18 237 METT5D1,KIF18A
SE_02_011100004 chr11:28696312-28864310 Sample_02_0111 Ovaries IOE4 4 22 4397 63 8 437 0 METT5D1
SE_02_011600738 chr11:28696413-28705776 Sample_02_0116 Mammary gland MDA-MB-231_untreat 738 1 224 8 0 47 0 METT5D1
SE_02_015100678 chr11:28699871-28707364 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 678 1 173 7 0 36 0 METT5D1
SE_02_010700255 chr11:28726438-28778569 Sample_02_0107 Endometrium EEC16 255 5 1284 29 2 159 0 METT5D1
SE_02_011000327 chr11:28729665-28769345 Sample_02_0110 Ovaries IOE11 327 4 950 20 2 152 0 METT5D1
SE_02_027400322 chr11:28734720-28771057 Sample_02_0274 Endometriosis hTERT_KD 322 5 881 23 1 116 0 METT5D1
SE_01_002600881 chr11:28742177-28768626 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 881 3 644 19 1 82 0 METT5D1
SE_02_026300593 chr11:28742535-28768634 Sample_02_0263 Osteoblastic hFOB_undifferentiated 593 3 639 19 1 79 0 METT5D1
SE_02_018200448 chr11:28748887-28771650 Sample_02_0182 melanoma LOX-IMVI 448 8 568 19 1 44 0 METT5D1
SE_02_011600342 chr11:28753988-28771116 Sample_02_0116 Mammary gland MDA-MB-231_untreat 342 2 445 17 1 19 0 METT5D1
SE_02_015000647 chr11:28755401-28771816 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 647 1 414 16 1 18 0 METT5D1
SE_02_001300284 chr11:28755842-28769278 Sample_02_0013 Kidney 786-O_HIF2A 284 4 332 13 1 18 0 METT5D1
SE_02_008800819 chr11:28756349-28763314 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 819 2 174 6 0 15 0 METT5D1
SE_02_020100060 chr11:28757466-28770912 Sample_02_0201 Stomach MKN7 60 6 323 15 1 17 0 METT5D1
SE_02_031700386 chr11:28786293-28840551 Sample_02_0317 Neuroblastoma GICAN 386 6 1477 15 3 141 0 METT5D1
SE_02_011000227 chr11:28797775-28862278 Sample_02_0110 Ovaries IOE11 227 7 1844 14 5 178 0 METT5D1
SE_02_011600065 chr11:28807538-28862182 Sample_02_0116 Mammary gland MDA-MB-231_untreat 65 7 1581 12 4 156 0 METT5D1
SE_02_010800400 chr11:28819054-28838348 Sample_02_0108 Fallopian tube FT246 400 3 543 6 2 32 0 METT5D1
SE_01_001800080 chr11:28819123-28843708 Sample_01_0018 Submandibular Salivary Gland ACC112 80 3 697 7 3 64 0 METT5D1
SE_02_001300255 chr11:28820240-28839143 Sample_02_0013 Kidney 786-O_HIF2A 255 2 532 4 2 53 0 METT5D1
SE_02_027400344 chr11:28820365-28843647 Sample_02_0274 Endometriosis hTERT_KD 344 3 664 5 3 62 0 METT5D1
SE_02_003000195 chr11:28820599-28838689 Sample_02_0030 Kidney human kidney proximal tubule cells 195 5 516 4 2 51 0 METT5D1
SE_02_015100242 chr11:28821511-28840531 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 242 2 545 3 2 58 0 METT5D1
SE_02_030500411 chr11:28821980-28840317 Sample_02_0305 Neuroblastoma SH-EP 411 2 523 2 2 57 0 METT5D1
SE_02_015000309 chr11:28822027-28841030 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 309 2 544 2 2 58 0 METT5D1
SE_02_018200289 chr11:28822738-28842314 Sample_02_0182 melanoma LOX-IMVI 289 5 568 3 2 50 0 METT5D1
SE_02_010700313 chr11:28830412-28844026 Sample_02_0107 Endometrium EEC16 313 1 422 3 3 38 0 METT5D1
SE_03_001300302 chr11:28830463-28878931 Sample_03_0013 Lung A549 302 3 1483 6 4 95 0 METT5D1
SE_02_017200391 chr11:28830507-28843461 Sample_02_0172 Lung IMR-90_quiescent 391 2 395 3 3 38 0 METT5D1
SE_02_017100665 chr11:28830730-28840620 Sample_02_0171 Lung IMR-90_proliferating 665 1 310 2 2 38 0 METT5D1
SE_03_000900242 chr11:28830855-28878830 Sample_03_0009 Lung A549_dexamethasone_3h 242 3 1468 6 4 95 0 METT5D1
SE_02_028200447 chr11:28831125-28842956 Sample_02_0282 Lung IMR-90 447 2 366 3 3 38 0 METT5D1
SE_02_026300487 chr11:28831218-28840430 Sample_02_0263 Osteoblastic hFOB_undifferentiated 487 1 287 2 2 38 0 METT5D1
SE_01_002600106 chr11:28831233-28843921 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 106 3 385 3 3 37 0 METT5D1
SE_02_020900601 chr11:28831236-28843418 Sample_02_0209 Lung MRC-5_MRC5_1DPT 601 3 370 3 3 37 0 METT5D1
SE_01_000600530 chr11:28831248-28840571 Sample_01_0006 Lung A549_ethanol_1h 530 1 288 2 2 37 0 METT5D1
SE_02_000500457 chr11:28831436-28850596 Sample_02_0005 Cervical cervical-cancer_KDM5C 457 2 609 4 4 38 0 METT5D1
SE_02_007300767 chr11:28831529-28839810 Sample_02_0073 Other 90-8TL_DMSO 767 1 250 1 2 30 0 METT5D1
SE_01_005600624 chr11:28831610-28840131 Sample_01_0056 Bone osteoblast 624 1 255 1 2 35 0 METT5D1
SE_02_020100156 chr11:28831658-28843006 Sample_02_0201 Stomach MKN7 156 4 341 2 3 37 0 METT5D1
SE_02_017500637 chr11:28831779-28840144 Sample_02_0175 Lung IMR-90_Etoposide 637 4 249 1 2 35 0 METT5D1
SE_01_001700128 chr11:28831918-28838486 Sample_01_0017 Muscle A673 128 1 202 1 2 12 0 METT5D1
SE_01_001900326 chr11:28831972-28839953 Sample_01_0019 Brain and spinal cord astrocyte 326 1 241 1 2 31 0 METT5D1
SE_02_022900280 chr11:28831995-28839463 Sample_02_0229 Umbilical cord ID01 280 10 220 1 2 30 0 METT5D1
SE_02_009100366 chr11:28832048-28837887 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 366 1 179 1 2 4 0 METT5D1
SE_02_005400699 chr11:28832060-28839081 Sample_02_0054 Lung IMR-90_DMSO_1 699 1 212 1 2 27 0 METT5D1
SE_02_008800913 chr11:28832225-28837874 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 913 1 172 1 2 4 0 METT5D1
SE_02_005500740 chr11:28832265-28839705 Sample_02_0055 Lung IMR-90_Nutlin-3a 740 1 224 1 2 30 0 METT5D1
SE_02_017400076 chr11:28832296-28839387 Sample_02_0174 Lung IMR-90_DMSO_2 76 5 209 1 2 30 0 METT5D1
SE_02_021900225 chr11:28832308-28837812 Sample_02_0219 Mammary gland MDA-MB-231 225 4 167 1 2 4 0 METT5D1
SE_02_041900996 chr11:28832310-28838986 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 996 3 201 1 2 27 0 METT5D1
SE_01_002600892 chr11:29002097-29021190 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 892 4 491 2 0 20 0 METT5D1
SE_02_010700865 chr11:29006498-29029285 Sample_02_0107 Endometrium EEC16 865 2 600 4 0 62 0 METT5D1
Genomic distribution of SEs associated with METT5D1
Genome Browser

The strength of the tissue affected by the gene

Expression of METT5D1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)