SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: LOC286059 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700313 chr8:23003921-23077505 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 313 24 2310 151 6 159 3135 TNFRSF10B,RHOBTB2,LOC286059,LOC254896,TNFRSF10C
SE_02_151900081 chr8:23011508-23075149 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 81 35 2008 141 6 35 2318 TNFRSF10B,RHOBTB2,LOC286059,LOC254896,TNFRSF10C,PEBP4,TNFRSF10D
SE_02_152000074 chr8:23012943-23075148 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 74 29 1973 139 6 35 2318 TNFRSF10B,RHOBTB2,LOC286059,LOC254896,TNFRSF10C,PEBP4,TNFRSF10D
SE_02_058500328 chr8:23014564-23075759 Sample_02_0585 Umbilical vein HUVEC 0hour 328 14 1951 140 6 35 2295 TNFRSF10B,RHOBTB2,LOC286059,LOC254896,TNFRSF10C,PEBP4,TNFRSF10D
SE_02_156900539 chr8:23041655-23075736 Sample_02_1569 Endothelial Endothelial cells 539 14 1031 84 2 0 380 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_147100486 chr8:23041852-23075362 Sample_02_1471 Blood Outgrowth Endothelia BOEC 486 6 1013 84 2 0 380 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_066000877 chr8:23042080-23075502 Sample_02_0660 Mammary gland MCF10DCIS 877 11 1008 84 2 0 380 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_088101158 chr8:23042427-23076253 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1158 6 1002 84 2 0 380 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_146900545 chr8:23042720-23075595 Sample_02_1469 Umbilical Vein HUVEC 545 9 985 83 2 0 380 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_095000639 chr8:23042981-23075772 Sample_02_0950 Umbilical vein HUVEC_WT 639 15 983 83 2 0 377 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_094900884 chr8:23043031-23075724 Sample_02_0949 Umbilical artery HUAEC_WT 884 12 981 83 2 0 368 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_083200194 chr8:23043775-23075827 Sample_02_0832 Umblical vein HUVECs_TNF30min 194 10 955 81 2 0 300 TNFRSF10B,LOC286059,LOC254896,RHOBTB2,TNFRSF10C
SE_02_083100490 chr8:23048988-23075717 Sample_02_0831 Umblical vein HUVECs_TNF0min 490 9 799 68 2 0 300 TNFRSF10B,LOC286059,RHOBTB2,TNFRSF10C,LOC254896
SE_02_103000388 chr8:23048990-23075934 Sample_02_1030 Colon DKO 388 7 804 69 2 0 300 TNFRSF10B,LOC286059,RHOBTB2,TNFRSF10C,LOC254896
SE_02_156800880 chr8:23049045-23076086 Sample_02_1568 Heart Cardiac progenitor cells 880 4 803 69 2 0 300 TNFRSF10B,LOC286059,RHOBTB2,TNFRSF10C,LOC254896
SE_02_130800675 chr8:23049152-23074713 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 675 6 771 66 2 0 300 TNFRSF10B,LOC286059,RHOBTB2,TNFRSF10C,LOC254896
SE_02_125800688 chr8:23049179-23075636 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 688 3 791 67 2 0 300 TNFRSF10B,LOC286059,RHOBTB2,TNFRSF10C,LOC254896
SE_02_130900780 chr8:23049203-23074782 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 780 5 771 66 2 0 300 TNFRSF10B,LOC286059,RHOBTB2,TNFRSF10C,LOC254896
SE_02_151800315 chr8:23049773-23075136 Sample_02_1518 Umbilical vein HUVEC_Scr 315 11 762 65 2 0 300 TNFRSF10B,LOC286059,TNFRSF10C,LOC254896
Genomic distribution of SEs associated with LOC286059
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC286059

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)