SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: LOC101929224 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_154000117 chr1:200622512-200684721 Sample_02_1540 Nasopharyngeal HK1 117 23 1574 282 11 108 612 DDX59,LOC101929224,KIF14
SE_02_047900290 chr1:200622553-200684648 Sample_02_0479 Head and neck SCC25 290 45 1570 281 11 108 612 DDX59,LOC101929224,KIF14
SE_02_104701905 chr1:200622583-200690058 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1905 16 1733 332 11 112 612 DDX59,LOC101929224,KIF14,CAMSAP2
SE_02_103600610 chr1:200622606-200678244 Sample_02_1036 Mammary gland HCC70_XY018 610 26 1414 243 11 107 612 DDX59,LOC101929224,KIF14
SE_02_050400421 chr1:200622609-200675602 Sample_02_0504 Esophagus KYSE510_1 421 17 1333 218 9 107 612 DDX59,LOC101929224,KIF14
SE_02_049100207 chr1:200622630-200684638 Sample_02_0491 Pharyng Detroit 562-Control 207 19 1568 281 11 108 612 DDX59,LOC101929224,KIF14
SE_02_103200179 chr1:200622652-200687687 Sample_02_1032 Head and neck SCC1 JQ1 179 24 1654 305 11 108 612 DDX59,LOC101929224,KIF14
SE_02_136200178 chr1:200622661-200700280 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 178 18 2004 369 11 129 612 DDX59,LOC101929224,KIF14,CAMSAP2
SE_02_136100213 chr1:200622665-200684533 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 213 20 1568 281 11 108 612 DDX59,LOC101929224,KIF14
SE_02_049200211 chr1:200622836-200684600 Sample_02_0492 Pharyng Detroit 562_LPS 211 17 1562 278 11 108 612 DDX59,LOC101929224,KIF14
SE_02_136000154 chr1:200623032-200700310 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 154 22 1992 364 11 129 612 DDX59,LOC101929224,KIF14,CAMSAP2
SE_02_103700167 chr1:200623159-200684731 Sample_02_1037 Pharynx FaDu Control 167 13 1551 275 11 108 612 DDX59,LOC101929224,KIF14
SE_02_103100190 chr1:200624496-200677415 Sample_02_1031 Head and neck SCC1 contol 190 30 1338 204 7 107 612 DDX59,LOC101929224,KIF14
SE_02_103800228 chr1:200624585-200684715 Sample_02_1038 Pharynx FaDu LPS 228 12 1509 246 7 108 612 DDX59,LOC101929224,KIF14
SE_02_093000200 chr1:200627192-200709974 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 200 38 2155 351 7 138 612 DDX59,LOC101929224,KIF14,CAMSAP2
SE_02_092900375 chr1:200628573-200675336 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 375 22 1171 144 2 102 612 DDX59,LOC101929224,KIF14,CAMSAP2
SE_02_143400235 chr1:200629410-200672972 Sample_02_1434 Trophoblast trophoblast stem cells 235 7 1092 130 2 87 612 DDX59,LOC101929224,KIF14
SE_02_143500470 chr1:200629642-200660841 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 470 5 751 70 1 50 263 DDX59,KIF14,LOC101929224
SE_02_113200412 chr1:200629655-200684619 Sample_02_1132 Pancreas KLM1 wt 412 18 1385 209 4 103 612 DDX59,LOC101929224,KIF14
SE_02_123100649 chr1:200638062-200660534 Sample_02_1231 Lung PC9_siMED13L-1 649 12 556 55 1 40 263 DDX59,KIF14,LOC101929224
SE_02_050600589 chr1:200638137-200688224 Sample_02_0506 Esophagus TE5_1 589 14 1315 230 4 94 612 DDX59,LOC101929224,KIF14
SE_02_051700587 chr1:200638138-200688069 Sample_02_0517 Esophagus TE5 587 16 1314 229 4 94 612 DDX59,LOC101929224,KIF14
SE_02_153900608 chr1:200638452-200675549 Sample_02_1539 Nasopharyngeal C666-1 608 11 963 132 2 91 612 DDX59,LOC101929224,KIF14
SE_02_050500539 chr1:200638770-200675719 Sample_02_0505 Esophagus KYSE70_1 539 10 955 133 2 91 612 DDX59,LOC101929224,KIF14
SE_02_051600536 chr1:200638770-200675719 Sample_02_0516 Esophagus KYSE70 536 10 955 133 2 91 612 DDX59,LOC101929224,KIF14
SE_02_123300684 chr1:200638957-200660223 Sample_02_1233 Lung PC9_miR-4497 mimic 684 7 534 53 1 39 263 DDX59,KIF14,LOC101929224
SE_02_094700538 chr1:200638982-200660787 Sample_02_0947 Tongue Cal27 538 4 551 56 1 39 263 DDX59,KIF14,LOC101929224
SE_02_094600163 chr1:200639095-200675654 Sample_02_0946 Tongue HN12 163 5 951 132 2 91 612 DDX59,LOC101929224,KIF14
SE_02_094800630 chr1:200639142-200675713 Sample_02_0948 Pharyng Detroit562 630 6 950 133 2 91 612 DDX59,LOC101929224,KIF14
SE_02_135800077 chr1:200639154-200676219 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 77 9 966 139 2 91 612 DDX59,LOC101929224,KIF14
SE_02_066000383 chr1:200639207-200688188 Sample_02_0660 Mammary gland MCF10DCIS 383 12 1292 229 4 93 612 DDX59,LOC101929224,KIF14
SE_02_135900087 chr1:200639258-200676582 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 87 13 977 141 2 91 612 DDX59,LOC101929224,KIF14
SE_02_060400071 chr1:200639308-200684545 Sample_02_0604 Mammary gland MCF10A_scrshRNA_DMSO 71 7 1179 194 4 92 612 DDX59,LOC101929224,KIF14
SE_02_154100472 chr1:200639314-200675295 Sample_02_1541 Nasopharyngeal HNE1 472 9 939 129 2 91 612 DDX59,LOC101929224,KIF14
SE_02_153200229 chr1:200639316-200684627 Sample_02_1532 Mammary gland MCF10A 229 6 1179 194 4 92 612 DDX59,LOC101929224,KIF14
SE_02_059600059 chr1:200639318-200688005 Sample_02_0596 Mammary gland MCF10A_ DMSO 59 8 1284 225 4 93 612 DDX59,LOC101929224,KIF14
SE_02_060300107 chr1:200639324-200688367 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 107 9 1290 229 4 96 612 DDX59,LOC101929224,KIF14
SE_02_053000238 chr1:200639428-200684659 Sample_02_0530 Mammary gland MCF10A 238 13 1175 194 4 92 612 DDX59,LOC101929224,KIF14
SE_02_107300083 chr1:200639442-200688414 Sample_02_1073 Keratinocyte keratinocytes stem cell 83 10 1283 229 4 96 612 DDX59,LOC101929224,KIF14,CAMSAP2
SE_02_072100741 chr1:200639468-200660480 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 741 3 522 53 1 39 263 DDX59,KIF14,LOC101929224
SE_02_059700045 chr1:200639499-200688774 Sample_02_0597 Mammary gland MCF10A_Nutlin3A 45 9 1291 230 4 96 612 DDX59,LOC101929224,KIF14
SE_02_135700059 chr1:200639613-200676208 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 59 12 946 136 2 91 612 DDX59,LOC101929224,KIF14
SE_02_066600588 chr1:200639654-200660557 Sample_02_0666 Prostate RWPE1 Lacz rep1 588 5 518 53 1 39 263 DDX59,KIF14,LOC101929224
SE_02_061900393 chr1:200639700-200676137 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 393 15 943 136 2 91 612 DDX59,LOC101929224,KIF14
SE_02_072600186 chr1:200641443-200675201 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 186 8 877 129 2 79 569 DDX59,LOC101929224,KIF14
SE_02_064700673 chr1:200654392-200684651 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 673 7 796 161 3 63 372 DDX59,LOC101929224,KIF14
SE_02_060200129 chr1:200654422-200675828 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 129 4 562 100 1 62 372 DDX59,LOC101929224,KIF14
SE_02_072200409 chr1:200658831-200675701 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 409 5 447 85 1 53 372 DDX59,LOC101929224,KIF14
SE_02_133800321 chr1:200659070-200675585 Sample_02_1338 Esophagus KYSE180 321 5 442 82 1 53 362 DDX59,LOC101929224,KIF14
SE_02_081800565 chr1:200659506-200672376 Sample_02_0818 Ovary High-grade serous ovarian cancer 565 2 356 56 1 37 349 DDX59,LOC101929224,KIF14
Genomic distribution of SEs associated with LOC101929224
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC101929224

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)