SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: LOC101928994 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_135400989 chr10:69213268-69242356 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 989 6 914 141 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_048100513 chr10:69213424-69243107 Sample_02_0481 Mammary gland MDA-MB231 513 11 928 141 18 4 487 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_099100840 chr10:69215159-69242207 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 840 8 867 133 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_153700332 chr10:69215198-69242337 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 332 8 866 132 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_103100567 chr10:69215228-69241824 Sample_02_1031 Head and neck SCC1 contol 567 9 851 132 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_103200519 chr10:69215252-69241811 Sample_02_1032 Head and neck SCC1 JQ1 519 9 850 132 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_105401027 chr10:69215261-69241371 Sample_02_1054 Esophagus SKGT4 1027 12 840 131 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_126701129 chr10:69215354-69242353 Sample_02_1267 Bone Im-GCT-4072_G34W 1129 9 862 131 18 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_126301714 chr10:69215783-69242377 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1714 5 847 130 17 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_139900564 chr10:69216074-69242282 Sample_02_1399 Bone U2OS_siMLL3.1 564 7 842 130 17 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_051700589 chr10:69216168-69242069 Sample_02_0517 Esophagus TE5 589 9 831 127 15 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_050600594 chr10:69216168-69242070 Sample_02_0506 Esophagus TE5_1 594 10 831 127 15 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_079800358 chr10:69216527-69244259 Sample_02_0798 Brain 1919 358 8 894 132 15 4 562 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_153500506 chr10:69216623-69242217 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 506 6 824 126 15 4 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_139800905 chr10:69217540-69242338 Sample_02_1398 Bone U2OS_siNC 905 5 804 122 14 3 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_126800505 chr10:69217563-69242171 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 505 8 800 121 13 3 467 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_104301569 chr10:69222584-69245173 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1569 14 741 105 12 2 470 HKDC1,LOC101928994,SUPV3L1,HK1
SE_02_104602570 chr10:69227474-69265828 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2570 12 1222 118 5 0 1221 HKDC1,LOC101928994,SUPV3L1,HK1
Genomic distribution of SEs associated with LOC101928994
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC101928994

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)