Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: LOC101928489 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_127800100 chr6:73674890-73747956 Sample_02_1278 Chordoma UCH1_DMSO_48h 100 17 1902 134 6 102 571 CD109,LOC101928489,SLC17A5
SE_02_058600219 chr6:73675697-73732208 Sample_02_0586 Chordal patient-derived chordoma MGH_4 219 17 1457 95 4 90 520 CD109,LOC101928489,SLC17A5
SE_02_066000239 chr6:73675850-73747282 Sample_02_0660 Mammary gland MCF10DCIS 239 22 1867 132 6 99 571 CD109,LOC101928489,SLC17A5
SE_02_057100222 chr6:73679780-73722804 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 222 13 1110 74 1 84 444 CD109,LOC101928489,SLC17A5
SE_02_116600736 chr6:73680541-73715545 Sample_02_1166 Biliary H69_TGF beta_16h_1 736 14 918 54 1 71 444 CD109,LOC101928489,SLC17A5
SE_02_116900819 chr6:73680568-73715555 Sample_02_1169 Biliary H69_TGF beta_16h_2 819 11 919 54 1 71 444 CD109,LOC101928489,SLC17A5
SE_02_057200187 chr6:73680782-73722805 Sample_02_0572 Brain LN229_1_mM_glucose 187 10 1074 71 1 78 444 CD109,LOC101928489,SLC17A5
SE_02_152200797 chr6:73688464-73724180 Sample_02_1522 Skin A375 RTKi 797 10 900 71 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_145800094 chr6:73689779-73726344 Sample_02_1458 Pancreas THP1+PANC1_shNC 94 10 914 75 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_048100367 chr6:73690263-73733044 Sample_02_0481 Mammary gland MDA-MB231 367 15 1076 83 4 84 520 CD109,LOC101928489,SLC17A5
SE_02_076300426 chr6:73690940-73734829 Sample_02_0763 Podocyte podocyte_DEX 426 10 1108 89 4 85 520 CD109,LOC101928489,SLC17A5
SE_02_076201311 chr6:73690942-73735406 Sample_02_0762 Podocyte podocyte_CTL 1311 7 1116 91 5 86 520 CD109,LOC101928489,SLC17A5
SE_02_044800863 chr6:73691074-73723305 Sample_02_0448 Bone MNNG 863 7 811 69 1 83 461 CD109,LOC101928489,SLC17A5
SE_02_132201446 chr6:73691165-73705573 Sample_02_1322 Connective Tissue HT1080_WT 1446 2 373 22 1 45 444 CD109,LOC101928489,SLC17A5
SE_02_064800593 chr6:73691256-73725752 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 593 10 853 73 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_127901561 chr6:73691330-73723927 Sample_02_1279 Bone Mesenchymal stem cells 1561 9 820 69 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_126501449 chr6:73691367-73723846 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 1449 8 819 69 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_126400984 chr6:73691381-73723642 Sample_02_1264 Bone Im-GCT-4072_G34W KO 984 7 816 69 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_053000368 chr6:73691436-73723723 Sample_02_0530 Mammary gland MCF10A 368 14 818 69 1 83 468 CD109,LOC101928489,SLC17A5
SE_02_105000416 chr6:73693517-73722675 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 416 5 727 63 1 75 444 CD109,LOC101928489,SLC17A5
SE_02_147000620 chr6:73693874-73715708 Sample_02_1470 Umbilical Vein H441 620 3 560 44 1 69 418 CD109,LOC101928489,SLC17A5
SE_02_147100919 chr6:73693915-73725890 Sample_02_1471 Blood Outgrowth Endothelia BOEC 919 6 787 71 1 83 439 CD109,LOC101928489,SLC17A5
SE_02_126300694 chr6:73694026-73724189 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 694 6 748 67 1 83 427 CD109,LOC101928489,SLC17A5
SE_02_152100785 chr6:73694141-73722737 Sample_02_1521 Skin A375 DMSO 785 8 709 62 1 76 384 CD109,LOC101928489,SLC17A5
SE_02_061700166 chr6:73694151-73729463 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 166 7 870 75 2 83 405 CD109,LOC101928489,SLC17A5
SE_02_149300718 chr6:73694220-73706549 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 718 3 323 20 1 47 374 CD109,LOC101928489,SLC17A5
SE_02_153200626 chr6:73694285-73735774 Sample_02_1532 Mammary gland MCF10A 626 9 1032 89 5 86 447 CD109,LOC101928489,SLC17A5
SE_02_135900367 chr6:73694371-73725853 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 367 17 765 70 1 83 384 CD109,LOC101928489,SLC17A5
SE_02_143000081 chr6:73694482-73733064 Sample_02_1430 Blood Kasumi-3_mock-infected 81 7 946 80 4 83 430 CD109,LOC101928489,SLC17A5
SE_02_143100421 chr6:73694561-73729400 Sample_02_1431 Blood T cell 421 5 852 75 2 82 371 CD109,LOC101928489,SLC17A5
SE_02_083600999 chr6:73694569-73732902 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 999 10 942 80 4 83 423 CD109,LOC101928489,SLC17A5
SE_02_103400491 chr6:73694578-73729443 Sample_02_1034 Blood AML cell 491 8 852 75 2 82 371 CD109,LOC101928489,SLC17A5
SE_02_133100661 chr6:73694586-73729643 Sample_02_1331 Blood Molm13_CTRL 661 8 859 75 2 82 371 CD109,LOC101928489,SLC17A5
SE_02_045900546 chr6:73694587-73732723 Sample_02_0459 Blood ME-1_DMSO_6h 546 16 939 80 4 83 423 CD109,LOC101928489,SLC17A5
SE_02_046000387 chr6:73694589-73733014 Sample_02_0460 Blood ME-1_I-10-49_6h 387 17 945 80 4 83 422 CD109,LOC101928489,SLC17A5
SE_02_151600224 chr6:73696420-73723843 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 224 6 675 63 1 72 92 CD109,SLC17A5,LOC101928489
SE_02_151500385 chr6:73696459-73735588 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 385 9 968 85 5 75 135 CD109,SLC17A5,LOC101928489
SE_02_066100484 chr6:73697747-73734779 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 484 14 914 82 3 68 76 CD109,SLC17A5,LOC101928489
SE_02_082000620 chr6:73698238-73722768 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 620 5 595 57 0 59 0 CD109,SLC17A5,LOC101928489
SE_02_058500910 chr6:73698297-73733755 Sample_02_0585 Umbilical vein HUVEC 0hour 910 17 871 78 3 66 76 CD109,SLC17A5,LOC101928489
SE_02_131100907 chr6:73698385-73724463 Sample_02_1311 Bone marrow HDMSCs 907 7 637 63 0 65 24 CD109,SLC17A5,LOC101928489
SE_02_156601019 chr6:73699637-73725163 Sample_02_1566 Dermal Dermal fibroblast 1019 9 618 62 0 61 24 CD109,SLC17A5,LOC101928489
SE_02_060600958 chr6:73699688-73725010 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 958 7 612 61 0 61 24 CD109,SLC17A5,LOC101928489
SE_02_049901369 chr6:73699850-73725221 Sample_02_0499 Fetal lung IMR90 IR Senescence 1369 8 615 62 0 61 24 CD109,SLC17A5,LOC101928489
SE_02_072700501 chr6:73700131-73723981 Sample_02_0727 Fetal lung IMR90_Etoposide 501 5 594 59 0 60 24 CD109,SLC17A5,LOC101928489
SE_02_145900172 chr6:73701658-73733318 Sample_02_1459 Pancreas THP1+PANC1_shCTCF 172 5 786 70 3 61 76 CD109,SLC17A5,LOC101928489
SE_02_126001006 chr6:73703007-73723952 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 1006 6 526 54 0 53 24 CD109,SLC17A5,LOC101928489
SE_02_045100956 chr6:73703360-73733124 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 956 5 739 66 3 52 76 CD109,SLC17A5,LOC101928489
SE_02_126801078 chr6:73703578-73723107 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 1078 3 490 51 0 47 4 CD109,SLC17A5,LOC101928489
SE_02_062900415 chr6:73733524-73774913 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 415 10 1104 74 3 56 338 CD109,LOC101928489,SLC17A5
SE_02_154200404 chr6:73738794-73760821 Sample_02_1542 Gastrointestinal Stromal GIST-T1 404 10 576 48 2 18 41 CD109,LOC101928489

Genomic distribution of SEs associated with LOC101928489

The strength of the tissue affected by the gene


Expression of LOC101928489