SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID:
Gene: LOC100506472 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900470 chr22:39383896-39454141 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 470 40 2043 141 7 138 2673 SYNGR1,TAB1,LOC100506472,MIEF1,MGAT3-AS1,MGAT3
SE_02_083700107 chr22:39405078-39475012 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 107 18 2040 124 10 166 2432 TAB1,MGAT3,LOC100506472,ATF4,MIEF1,MGAT3-AS1,SYNGR1
SE_02_103501391 chr22:39412054-39465063 Sample_02_1035 Mammary gland HCC70_Vehicle 1391 15 1530 104 10 153 2432 TAB1,MGAT3,LOC100506472,MIEF1,MGAT3-AS1,SYNGR1
SE_02_136201026 chr22:39426885-39455214 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 1026 9 831 64 4 59 1468 TAB1,LOC100506472,MIEF1,MGAT3-AS1,MGAT3
SE_02_136100997 chr22:39427138-39455184 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 997 9 818 63 4 57 1429 TAB1,LOC100506472,MIEF1,MGAT3-AS1,MGAT3
SE_02_121900325 chr22:39427305-39452907 Sample_02_1219 Bone marrow H929 325 5 759 59 4 47 1429 TAB1,LOC100506472,MIEF1,MGAT3-AS1,MGAT3
SE_02_122200212 chr22:39427439-39449704 Sample_02_1222 Bone marrow KMS12 212 10 664 56 4 47 1429 TAB1,LOC100506472,MGAT3-AS1,MGAT3
SE_02_061301017 chr22:39429709-39446146 Sample_02_0613 Liposarcoma MLPS_T1 1017 4 486 41 4 22 1288 TAB1,LOC100506472,MGAT3-AS1,MGAT3
SE_02_117300646 chr22:39429815-39438084 Sample_02_1173 Brain GBM01 646 1 245 17 0 22 1288 TAB1,LOC100506472,MGAT3-AS1,MGAT3
SE_02_121300961 chr22:39429935-39437019 Sample_02_1213 Brain GBM31 961 1 222 16 0 22 1223 TAB1,LOC100506472,MGAT3-AS1,MGAT3
SE_02_120301105 chr22:39430136-39437012 Sample_02_1203 Brain NB1 1105 1 211 16 0 20 1174 TAB1,LOC100506472,MGAT3-AS1,MGAT3
SE_02_078100070 chr22:39430575-39457115 Sample_02_0781 Lymphoma Pfeiffer_DMSO 70 1 760 62 4 27 1130 TAB1,LOC100506472,MIEF1,MGAT3-AS1,MGAT3
Genomic distribution of SEs associated with LOC100506472
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC100506472

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)