Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000281548 |
| Gene: | LINC00895 | Gene type: | lncRNA |
| Strand: | - | External links: |
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| Genomic region: | chr22:19565203-19566839 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_058500673 | chr22:19554747-19607974 |
Sample_02_0585 | Umbilical vein | HUVEC 0hour | 673 | 11 | 1661 | 173 | 8 | 0 | 185 | LINC00895,CLDN5 |
| SE_02_147100691 | chr22:19554763-19580201 |
Sample_02_1471 | Blood Outgrowth Endothelia | BOEC | 691 | 3 | 753 | 64 | 3 | 0 | 185 | LINC00895,CLDN5 |
| SE_02_083200650 | chr22:19567895-19593998 |
Sample_02_0832 | Umblical vein | HUVECs_TNF30min | 650 | 13 | 825 | 98 | 5 | 0 | 0 | CLDN5,LINC00895 |
| SE_02_151900599 | chr22:19571312-19597179 |
Sample_02_1519 | Umbilical vein | HUVEC_Scr_IL1beta | 599 | 10 | 835 | 110 | 7 | 0 | 0 | CLDN5,LINC00895 |
| SE_02_152000372 | chr22:19572212-19591825 |
Sample_02_1520 | Umbilical vein | HUVEC_Notch1kd_IL1beta | 372 | 8 | 630 | 75 | 3 | 0 | 0 | CLDN5,LINC00895 |
| SE_02_104700185 | chr22:19573889-19644714 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 185 | 33 | 2358 | 162 | 12 | 0 | 0 | CLDN5,LINC00895 |
| SE_02_104800448 | chr22:19575882-19629709 |
Sample_02_1048 | Peripheral blood | CD4+ cell_UNTREATED | 448 | 23 | 1803 | 145 | 8 | 0 | 0 | LINC00895 |
| SE_02_104301287 | chr22:19576882-19613394 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 1287 | 17 | 1227 | 129 | 7 | 0 | 0 | LINC00895 |
| SE_02_104901087 | chr22:19576884-19611184 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 1087 | 20 | 1143 | 127 | 7 | 0 | 0 | LINC00895 |
| SE_02_104200610 | chr22:19579946-19607412 |
Sample_02_1042 | Peripheral blood | CD4+ cells_CTCL1137 | 610 | 9 | 893 | 107 | 5 | 0 | 0 | LINC00895 |
| SE_02_103900333 | chr22:19593003-19632407 |
Sample_02_1039 | Peripheral blood | CD4+ CD7- cells_CTCL1043 | 333 | 10 | 1346 | 76 | 5 | 0 | 0 | LINC00895 |
| SE_02_078100672 | chr22:19595659-19630055 |
Sample_02_0781 | Lymphoma | Pfeiffer_DMSO | 672 | 5 | 1177 | 59 | 1 | 0 | 0 | LINC00895,CLDN5 |
| SE_02_106500198 | chr22:19596369-19629773 |
Sample_02_1065 | Lymphoma | KARPAS-422_DMSO_8d | 198 | 8 | 1149 | 56 | 1 | 0 | 0 | LINC00895,CLDN5 |
| SE_02_068000171 | chr22:19596986-19627454 |
Sample_02_0680 | Embryo | H1 hESC-derived neural progenitor cells_Smad_48hr | 171 | 11 | 1036 | 50 | 1 | 0 | 0 | LINC00895,SEPT5-GP1BB |
| SE_02_098800239 | chr22:19605035-19645337 |
Sample_02_0988 | Blood | K562_EPZ | 239 | 11 | 1375 | 48 | 6 | 0 | 0 | LINC00895,UFD1L,CDC45,SEPT5,GP1BB |
| SE_02_067900426 | chr22:19609111-19626096 |
Sample_02_0679 | Embryo | H1 hESC-derived neural progenitor cells_Smad_24hr | 426 | 6 | 586 | 18 | 1 | 0 | 0 | LINC00895,CLDN5 |
Genomic distribution of SEs associated with LINC00895