Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000258279
Gene: LINC00592 Gene type: lncRNA
Strand: + External links:
Genomic region: chr12:52164115-52223813 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087200539 chr12:52203589-52231034 Sample_02_0872 Colon HCT116_siCtrl-5FU 539 4 803 111 5 71 935 C12ORF80,LINC00592,KRT80,KRT7
SE_02_102500597 chr12:52206266-52218234 Sample_02_1025 Esophagus KYSE150 597 1 367 42 3 45 683 C12ORF80,LINC00592,KRT80,KRT7
SE_02_049101075 chr12:52211322-52215758 Sample_02_0491 Pharyng Detroit 562-Control 1075 1 134 13 1 10 284 LINC00592,KRT80,KRT7,C12ORF80
SE_02_049200450 chr12:52212065-52223733 Sample_02_0492 Pharyng Detroit 562_LPS 450 1 349 59 4 21 336 LINC00592,KRT80,KRT7,C12ORF80
SE_02_136000709 chr12:52212421-52217458 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 709 1 161 16 1 14 175 LINC00592,KRT80,KRT7,C12ORF80
SE_02_136200612 chr12:52212491-52220339 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 612 1 253 42 4 16 150 LINC00592,KRT80,KRT7,C12ORF80
SE_02_094800478 chr12:52212697-52219147 Sample_02_0948 Pharyng Detroit562 478 1 205 32 3 16 118 LINC00592,KRT80,KRT7,C12ORF80
SE_02_103700325 chr12:52212762-52220050 Sample_02_1037 Pharynx FaDu Control 325 1 240 40 4 16 101 LINC00592,KRT80,KRT7,C12ORF80
SE_02_136100396 chr12:52212844-52222647 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 396 1 302 52 4 21 132 LINC00592,KRT80,KRT7,C12ORF80
SE_02_077800047 chr12:52212953-52222435 Sample_02_0778 Mammary gland MCF7_FASR 47 1 293 52 4 21 105 LINC00592,KRT80,KRT7,C12ORF80
SE_02_049101205 chr12:52215836-52223782 Sample_02_0491 Pharyng Detroit 562-Control 1205 1 228 46 3 9 112 LINC00592,KRT80,KRT7,C12ORF80

Genomic distribution of SEs associated with LINC00592

The strength of the tissue affected by the gene


Expression of LINC00592