SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000228295
Gene: LINC00392 Gene type: lncRNA
Strand: + External links:
Genomic region: chr13:73564244-73588070 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_088400262 chr13:73305880-73374617 Sample_02_0884 Colon LoVo 262 14 1842 16 15 237 0 LINC00392
SE_02_071300034 chr13:73320782-73374067 Sample_02_0713 Pancreas BxPC3_sgTP63 34 15 1438 16 13 197 0 LINC00392
SE_02_071200018 chr13:73322488-73374147 Sample_02_0712 Pancreas BxPC3_sgNEG 18 17 1399 16 12 197 0 LINC00392
SE_02_103700147 chr13:73323394-73371344 Sample_02_1037 Pharynx FaDu Control 147 19 1289 15 12 182 0 LINC00392,KLF5
SE_02_113200166 chr13:73323622-73373312 Sample_02_1132 Pancreas KLM1 wt 166 19 1339 16 12 185 0 LINC00392,RNU6-66P
SE_02_050700004 chr13:73323693-73373434 Sample_02_0507 Esophagus TE7_1 4 29 1340 16 12 186 0 LINC00392
SE_02_102600116 chr13:73324120-73434686 Sample_02_1026 Esophagus KYSE200 116 58 3217 64 23 403 0 LINC00392,KLF5
SE_02_136600039 chr13:73324131-73374097 Sample_02_1366 Pancreas BxPC3-untreated 39 16 1351 16 12 183 0 LINC00392
SE_02_103800253 chr13:73324354-73370788 Sample_02_1038 Pharynx FaDu LPS 253 13 1240 14 12 167 0 LINC00392,KLF5
SE_02_070700015 chr13:73324410-73374280 Sample_02_0707 Pancreas BxPC3 WT 15 15 1352 16 12 183 0 LINC00392
SE_02_135800139 chr13:73324625-73371286 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 139 12 1255 15 12 168 0 LINC00392
SE_02_070800032 chr13:73324659-73370279 Sample_02_0708 Pancreas hF3 organoid 32 11 1223 14 12 167 0 LINC00392
SE_02_113100054 chr13:73324735-73373702 Sample_02_1131 Pancreas T3M4 wt 54 18 1321 16 12 175 0 LINC00392
SE_02_154100460 chr13:73325063-73370617 Sample_02_1541 Nasopharyngeal HNE1 460 10 1220 14 12 167 0 LINC00392,KLF5
SE_02_135900106 chr13:73325124-73370782 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 106 10 1221 14 12 167 0 LINC00392,RNU6-66P
SE_02_112100032 chr13:73325358-73370795 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 32 20 1212 14 12 167 0 LINC00392,KLF5
SE_01_010700350 chr13:73333449-73434406 Sample_01_0107 Esophagus esophagus squamous epithelium 350 26 2987 63 20 386 0 LINC00392,KLF5
SE_02_094500163 chr13:73353512-73373438 Sample_02_0945 Brain SF767 163 7 588 11 3 83 0 LINC00392,RNU6-66P
SE_02_060000110 chr13:73354899-73370754 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 110 2 460 8 3 78 0 LINC00392
SE_02_151100334 chr13:73355415-73370708 Sample_02_1511 Lung H3122_untreated 334 5 440 8 3 72 0 LINC00392
SE_02_074900812 chr13:73357119-73400785 Sample_02_0749 Mammary gland HCC1599_GSI 812 7 1307 23 7 171 0 LINC00392,KLF5
SE_02_103602549 chr13:73357292-73370885 Sample_02_1036 Mammary gland HCC70_XY018 2549 7 389 9 2 62 0 LINC00392,RNU6-66P
SE_02_103502049 chr13:73357309-73371350 Sample_02_1035 Mammary gland HCC70_Vehicle 2049 9 404 9 2 63 0 LINC00392,RNU6-66P
SE_02_125400653 chr13:73358504-73371360 Sample_02_1254 Bladder Bladder tumor Basal1 653 7 368 9 1 62 0 LINC00392,KLF5
SE_02_152400448 chr13:73358793-73370482 Sample_02_1524 Lung H3122 DMSO 448 2 334 8 1 60 0 LINC00392
SE_02_124800758 chr13:73358797-73373998 Sample_02_1248 Bladder RT4 758 4 445 10 1 71 0 LINC00392,KLF5
SE_02_081901107 chr13:73358983-73374020 Sample_02_0819 Ovary Mucinous ovarian cancer 1107 4 444 10 1 71 0 LINC00392,RNU6-66P
SE_02_050400021 chr13:73363033-73434846 Sample_02_0504 Esophagus KYSE510_1 21 39 2197 56 12 291 0 LINC00392
SE_02_047701071 chr13:73363469-73376619 Sample_02_0477 Colon intestinal epithelial organoids_139a 1071 4 406 9 1 79 0 LINC00392
SE_02_071600613 chr13:73363485-73370314 Sample_02_0716 Pancreas SUIT2_GFP 613 3 197 6 1 55 0 LINC00392
SE_02_102700356 chr13:73363555-73434606 Sample_02_1027 Esophagus KYSE180_1 356 28 2181 56 12 290 0 LINC00392,KLF5
SE_02_059600489 chr13:73363757-73370749 Sample_02_0596 Mammary gland MCF10A_ DMSO 489 1 204 6 1 55 0 LINC00392
SE_02_060100129 chr13:73364138-73370450 Sample_02_0601 Mammary gland MCF10A_p53shRNA_Nutlin3A 129 1 188 6 1 55 0 LINC00392
SE_02_070900540 chr13:73364204-73374906 Sample_02_0709 Pancreas hT85_organoid 540 3 326 8 1 74 0 LINC00392
SE_02_133800215 chr13:73364285-73371448 Sample_02_1338 Esophagus KYSE180 215 3 215 7 1 56 0 LINC00392
SE_02_070600462 chr13:73364290-73369495 Sample_02_0706 Pancreas SUIT2 WT 462 4 154 3 1 50 0 LINC00392
SE_02_071500598 chr13:73364313-73369498 Sample_02_0715 Pancreas SUIT2_TP63dN 598 1 154 3 1 50 0 LINC00392
SE_02_071000358 chr13:73364409-73374045 Sample_02_0710 Pancreas hN34_organoid 358 3 292 8 1 70 0 LINC00392
SE_02_130500457 chr13:73364420-73374117 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 457 3 295 8 1 70 0 LINC00392,KLF5
SE_02_071100426 chr13:73364426-73373962 Sample_02_0711 Pancreas hN35_organoid 426 2 288 8 1 66 0 LINC00392
SE_02_060400259 chr13:73364451-73370425 Sample_02_0604 Mammary gland MCF10A_scrshRNA_DMSO 259 2 179 6 1 55 0 LINC00392
SE_02_060200584 chr13:73364596-73370560 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 584 1 178 5 1 55 0 LINC00392
SE_02_066600478 chr13:73364612-73370446 Sample_02_0666 Prostate RWPE1 Lacz rep1 478 1 175 5 1 55 0 LINC00392,KLF5
SE_02_141100051 chr13:73364628-73374428 Sample_02_1411 Colon KM12C 51 4 299 7 1 71 0 LINC00392
SE_02_152400046 chr13:73388368-73434215 Sample_02_1524 Lung H3122 DMSO 46 9 1409 40 10 190 0 LINC00392
SE_02_071200080 chr13:73388788-73434039 Sample_02_0712 Pancreas BxPC3_sgNEG 80 17 1390 38 8 188 0 LINC00392
SE_02_071300162 chr13:73388806-73434277 Sample_02_0713 Pancreas BxPC3_sgTP63 162 18 1395 39 8 188 0 LINC00392
SE_02_070700151 chr13:73388894-73430754 Sample_02_0707 Pancreas BxPC3 WT 151 17 1270 32 8 186 0 LINC00392
SE_02_151100082 chr13:73388933-73431352 Sample_02_1511 Lung H3122_untreated 82 14 1296 33 8 188 0 LINC00392
SE_02_071100341 chr13:73388951-73430715 Sample_02_0711 Pancreas hN35_organoid 341 13 1269 32 8 186 0 LINC00392
SE_02_125400437 chr13:73389268-73434566 Sample_02_1254 Bladder Bladder tumor Basal1 437 25 1393 39 8 188 0 LINC00392,KLF5
SE_02_088400411 chr13:73394843-73436020 Sample_02_0884 Colon LoVo 411 12 1276 36 7 184 0 LINC00392
SE_02_047700600 chr13:73396294-73434326 Sample_02_0477 Colon intestinal epithelial organoids_139a 600 17 1184 35 7 183 0 LINC00392
SE_02_047800898 chr13:73396445-73430046 Sample_02_0478 Colon normal colon mucosa 898 17 1027 27 6 179 0 LINC00392
SE_02_141100008 chr13:73396898-73429819 Sample_02_1411 Colon KM12C 8 19 1008 26 6 168 0 LINC00392
SE_02_113200339 chr13:73397268-73434941 Sample_02_1132 Pancreas KLM1 wt 339 19 1172 35 7 181 0 LINC00392,RNU6-66P
SE_02_070900222 chr13:73397593-73434745 Sample_02_0709 Pancreas hT85_organoid 222 13 1162 35 7 181 0 LINC00392
SE_02_050700058 chr13:73397628-73434258 Sample_02_0507 Esophagus TE7_1 58 23 1152 35 7 181 0 LINC00392
SE_02_127500682 chr13:73397684-73431111 Sample_02_1275 Prostate PC3_Vorinostat 682 18 1041 28 7 180 0 LINC00392,RNU6-66P
SE_02_070800115 chr13:73397918-73434346 Sample_02_0708 Pancreas hF3 organoid 115 16 1142 35 7 179 0 LINC00392
SE_02_081901076 chr13:73397938-73434293 Sample_02_0819 Ovary Mucinous ovarian cancer 1076 10 1140 35 7 179 0 LINC00392,RNU6-66P
SE_02_112100193 chr13:73398474-73430524 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 193 14 975 28 7 160 0 LINC00392,KLF5
SE_02_136201128 chr13:73398639-73434612 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 1128 9 1109 35 7 162 0 LINC00392
SE_02_113100151 chr13:73398642-73434959 Sample_02_1131 Pancreas T3M4 wt 151 19 1118 35 7 162 0 LINC00392
SE_02_136600435 chr13:73398688-73434124 Sample_02_1366 Pancreas BxPC3-untreated 435 12 1102 35 7 162 0 LINC00392
SE_02_103700461 chr13:73398722-73431318 Sample_02_1037 Pharynx FaDu Control 461 14 1005 29 7 162 0 LINC00392,KLF5
SE_02_061900212 chr13:73398789-73467459 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 212 15 2134 59 9 292 0 LINC00392
SE_02_066100458 chr13:73399024-73434006 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 458 14 1087 34 6 158 0 LINC00392
SE_02_071000192 chr13:73399035-73430539 Sample_02_0710 Pancreas hN34_organoid 192 10 964 28 6 156 0 LINC00392
SE_02_057000755 chr13:73399050-73429693 Sample_02_0570 Brain LN229_10_mM_glucose 755 8 935 26 5 143 0 LINC00392
SE_02_135900632 chr13:73399124-73430933 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 632 17 974 28 6 157 0 LINC00392,RNU6-66P
SE_02_064800820 chr13:73399135-73433854 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 820 14 1081 34 6 158 0 LINC00392,KLF5
SE_02_057200113 chr13:73399383-73429848 Sample_02_0572 Brain LN229_1_mM_glucose 113 17 924 26 5 138 0 LINC00392
SE_02_152500491 chr13:73399475-73433713 Sample_02_1525 Stomach N87 DMSO 491 10 1066 34 6 150 0 LINC00392
SE_02_066000438 chr13:73399488-73434585 Sample_02_0660 Mammary gland MCF10DCIS 438 14 1085 35 6 150 0 LINC00392,KLF5
SE_02_065200954 chr13:73399830-73431167 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 954 12 968 28 6 131 0 LINC00392,KLF5
SE_02_057100355 chr13:73399916-73429843 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 355 14 912 26 5 116 0 LINC00392
SE_02_153900866 chr13:73402592-73434901 Sample_02_1539 Nasopharyngeal C666-1 866 21 1007 34 6 124 0 LINC00392,RNU6-66P
SE_02_153200525 chr13:73402950-73434728 Sample_02_1532 Mammary gland MCF10A 525 11 991 34 6 124 0 LINC00392,RNU6-66P
SE_02_135700716 chr13:73403050-73430580 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 716 7 848 27 6 122 0 LINC00392,KLF5
SE_02_060300352 chr13:73403113-73431124 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 352 5 871 27 6 123 0 LINC00392
SE_02_135800588 chr13:73403117-73430657 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 588 9 850 27 6 122 0 LINC00392
SE_02_059600174 chr13:73403117-73434206 Sample_02_0596 Mammary gland MCF10A_ DMSO 174 12 976 34 6 124 0 LINC00392
SE_02_060200159 chr13:73403135-73434047 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 159 6 973 33 6 124 0 LINC00392
SE_02_152100376 chr13:73403215-73434555 Sample_02_1521 Skin A375 DMSO 376 10 980 34 6 124 0 LINC00392
SE_02_060100198 chr13:73403303-73430660 Sample_02_0601 Mammary gland MCF10A_p53shRNA_Nutlin3A 198 6 843 26 6 121 0 LINC00392
SE_02_154100925 chr13:73403326-73434670 Sample_02_1541 Nasopharyngeal HNE1 925 10 977 33 6 123 0 LINC00392,KLF5
SE_02_094600757 chr13:73403670-73430867 Sample_02_0946 Tongue HN12 757 7 840 26 6 118 0 LINC00392
SE_02_081200104 chr13:73404579-73434253 Sample_02_0812 Head and neck HN120-Pri 104 9 939 33 6 120 0 LINC00392
SE_02_047500755 chr13:73405099-73430907 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 755 7 803 26 6 117 0 LINC00392
SE_02_059700150 chr13:73406076-73430745 Sample_02_0597 Mammary gland MCF10A_Nutlin3A 150 5 772 26 6 115 0 LINC00392
SE_02_151500313 chr13:73410626-73434744 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 313 9 749 32 6 113 0 LINC00392
SE_02_151600400 chr13:73411573-73434234 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 400 10 710 32 6 102 0 LINC00392
SE_02_072100992 chr13:73411737-73434275 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 992 13 707 32 6 94 0 LINC00392,RNU6-66P
SE_02_060000199 chr13:73412563-73434117 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 199 5 680 31 6 88 0 LINC00392
SE_02_107300439 chr13:73413187-73434167 Sample_02_1073 Keratinocyte keratinocytes stem cell 439 7 663 30 5 87 0 LINC00392
SE_02_060400223 chr13:73413236-73430640 Sample_02_0604 Mammary gland MCF10A_scrshRNA_DMSO 223 4 537 23 5 85 0 LINC00392
SE_02_070300333 chr13:73415993-73434456 Sample_02_0703 Pancreas PATU8988S WT 333 6 577 29 3 77 0 LINC00392
SE_02_137100512 chr13:73416032-73431464 Sample_02_1371 Pancreas Patu899S-untreated 512 6 479 23 3 77 0 LINC00392
SE_02_071500160 chr13:73418412-73430815 Sample_02_0715 Pancreas SUIT2_TP63dN 160 5 343 16 1 74 0 LINC00392
SE_02_064701035 chr13:73419104-73434017 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1035 7 436 19 1 66 0 LINC00392,KLF5
SE_02_071800372 chr13:73419115-73431483 Sample_02_0718 Pancreas PATU8988S_GFP_DOX 372 3 353 15 1 66 0 LINC00392
SE_02_071900695 chr13:73419361-73434062 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 695 7 435 19 1 61 0 LINC00392
SE_02_112000616 chr13:73419993-73433642 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 616 10 407 19 1 58 0 LINC00392,KLF5
SE_02_150900287 chr13:73420151-73430786 Sample_02_1509 Lung H3122_LR 287 5 295 13 1 56 0 LINC00392
SE_02_094800997 chr13:73420938-73434750 Sample_02_0948 Pharyng Detroit562 997 4 414 19 1 57 0 LINC00392
SE_02_080700090 chr13:73421068-73430512 Sample_02_0807 Pancreatic duct pancreatic epithelial cells_ARID1A_KO 90 6 265 11 1 55 0 LINC00392
SE_02_070800609 chr13:73447318-73467096 Sample_02_0708 Pancreas hF3 organoid 609 7 569 10 2 117 0 LINC00392
SE_02_071200796 chr13:73447727-73467223 Sample_02_0712 Pancreas BxPC3_sgNEG 796 4 561 10 2 109 0 LINC00392
SE_02_125400799 chr13:73448427-73468182 Sample_02_1254 Bladder Bladder tumor Basal1 799 3 574 12 2 110 0 LINC00392,KLF5
SE_02_113100671 chr13:73448437-73467677 Sample_02_1131 Pancreas T3M4 wt 671 8 558 12 2 107 0 LINC00392
SE_02_050700158 chr13:73448458-73468104 Sample_02_0507 Esophagus TE7_1 158 9 573 12 2 110 0 LINC00392
SE_02_152400547 chr13:73448589-73467380 Sample_02_1524 Lung H3122 DMSO 547 2 548 11 2 107 0 LINC00392
SE_02_071000900 chr13:73448763-73466777 Sample_02_0710 Pancreas hN34_organoid 900 5 528 10 2 104 0 LINC00392
SE_02_050400447 chr13:73449339-73468953 Sample_02_0504 Esophagus KYSE510_1 447 9 569 12 2 115 0 LINC00392
SE_02_047701194 chr13:73450534-73478251 Sample_02_0477 Colon intestinal epithelial organoids_139a 1194 6 815 24 2 121 0 LINC00392
SE_02_071200404 chr13:73492064-73501537 Sample_02_0712 Pancreas BxPC3_sgNEG 404 3 214 4 0 29 0 LINC00392
SE_02_070800495 chr13:73492423-73500364 Sample_02_0708 Pancreas hF3 organoid 495 5 186 3 0 25 0 LINC00392
SE_02_070700374 chr13:73492707-73500514 Sample_02_0707 Pancreas BxPC3 WT 374 7 180 2 0 27 0 LINC00392
SE_02_050400165 chr13:73571836-73618653 Sample_02_0504 Esophagus KYSE510_1 165 31 1098 108 4 125 0 LINC00392
SE_02_070900494 chr13:73576124-73620299 Sample_02_0709 Pancreas hT85_organoid 494 16 1081 100 4 116 0 LINC00392
SE_02_152400239 chr13:73582623-73622493 Sample_02_1524 Lung H3122 DMSO 239 11 1019 90 5 83 0 LINC00392
SE_02_112101051 chr13:73584289-73611970 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 1051 10 706 63 4 75 0 LINC00392,KLF12
SE_02_071100622 chr13:73591958-73619677 Sample_02_0711 Pancreas hN35_organoid 622 11 699 62 3 73 0 LINC00392
SE_02_071000439 chr13:73592175-73619723 Sample_02_0710 Pancreas hN34_organoid 439 11 695 60 3 73 0 LINC00392
SE_02_071200486 chr13:73596517-73623089 Sample_02_0712 Pancreas BxPC3_sgNEG 486 9 682 62 4 51 0 LINC00392
SE_02_071300621 chr13:73596628-73622661 Sample_02_0713 Pancreas BxPC3_sgTP63 621 8 669 61 4 47 0 LINC00392
SE_02_070700609 chr13:73597294-73619295 Sample_02_0707 Pancreas BxPC3 WT 609 9 573 53 3 41 0 LINC00392
SE_02_064501849 chr13:73597508-73619065 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1849 7 562 52 3 40 0 LINC00392,KLF12
SE_02_050700447 chr13:73605330-73612876 Sample_02_0507 Esophagus TE7_1 447 11 191 19 1 28 0 LINC00392
SE_02_084001287 chr13:73657129-73692304 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1287 9 907 11 0 182 454 KLF12,LINC00392
SE_02_085800639 chr13:73657366-73699746 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 639 9 1076 12 0 251 817 KLF12,LINC00392
SE_02_102600564 chr13:73660518-73715774 Sample_02_1026 Esophagus KYSE200 564 26 1367 20 0 304 879 KLF12,LINC00392
SE_02_057100277 chr13:73661823-73699360 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 277 15 938 8 0 251 817 KLF12,LINC00392
SE_02_070300586 chr13:73667508-73685069 Sample_02_0703 Pancreas PATU8988S WT 586 4 433 7 0 53 0 LINC00392
SE_02_151100212 chr13:73670843-73684248 Sample_02_1511 Lung H3122_untreated 212 3 326 5 0 53 0 LINC00392
SE_02_071200139 chr13:73671271-73716783 Sample_02_0712 Pancreas BxPC3_sgNEG 139 13 1095 17 0 288 879 KLF12,LINC00392
SE_02_152400283 chr13:73671434-73684044 Sample_02_1524 Lung H3122 DMSO 283 3 308 5 0 51 0 LINC00392
SE_02_071300515 chr13:73671841-73684954 Sample_02_0713 Pancreas BxPC3_sgTP63 515 3 324 5 0 51 0 LINC00392
SE_02_094800790 chr13:73671842-73716285 Sample_02_0948 Pharyng Detroit562 790 10 1071 17 0 287 879 KLF12,LINC00392
SE_02_070900935 chr13:73671953-73685060 Sample_02_0709 Pancreas hT85_organoid 935 3 322 5 0 51 0 LINC00392
SE_02_124800384 chr13:73672012-73716130 Sample_02_1248 Bladder RT4 384 12 1060 17 0 282 879 KLF12,LINC00392,KLF5
SE_02_125400560 chr13:73672016-73721843 Sample_02_1254 Bladder Bladder tumor Basal1 560 21 1226 27 0 293 879 KLF12,LINC00392
SE_02_070800438 chr13:73672147-73684424 Sample_02_0708 Pancreas hF3 organoid 438 6 299 5 0 51 0 LINC00392
SE_02_070700403 chr13:73672178-73684642 Sample_02_0707 Pancreas BxPC3 WT 403 8 301 5 0 51 0 LINC00392
SE_02_050400051 chr13:73672368-73716121 Sample_02_0504 Esophagus KYSE510_1 51 17 1052 16 0 281 879 KLF12,LINC00392
SE_02_113100571 chr13:73672488-73684158 Sample_02_1131 Pancreas T3M4 wt 571 4 289 4 0 50 0 LINC00392
SE_02_152100544 chr13:73673031-73698979 Sample_02_1521 Skin A375 DMSO 544 9 629 4 0 207 817 KLF12,LINC00392
SE_02_141100173 chr13:73673107-73684052 Sample_02_1411 Colon KM12C 173 7 270 4 0 32 0 LINC00392
SE_02_057200185 chr13:73673450-73708432 Sample_02_0572 Brain LN229_1_mM_glucose 185 18 829 9 0 243 817 KLF12,LINC00392
SE_02_051700561 chr13:73675021-73707926 Sample_02_0517 Esophagus TE5 561 10 773 8 0 242 817 KLF12,LINC00392
SE_02_050600566 chr13:73675021-73707927 Sample_02_0506 Esophagus TE5_1 566 9 773 8 0 242 817 KLF12,LINC00392
SE_02_133800096 chr13:73675658-73708007 Sample_02_1338 Esophagus KYSE180 96 11 764 8 0 240 817 KLF12,LINC00392
SE_02_057000531 chr13:73676270-73698153 Sample_02_0570 Brain LN229_10_mM_glucose 531 7 528 3 0 202 817 KLF12,LINC00392
SE_02_108400508 chr13:73677562-73704167 Sample_02_1084 Blood KBM7-derived near haploid cells 508 13 623 7 0 220 817 KLF12,LINC00392
SE_02_151100390 chr13:73698269-73717881 Sample_02_1511 Lung H3122_untreated 390 9 477 12 0 63 62 KLF12,LINC00392
SE_02_152400233 chr13:73698313-73718044 Sample_02_1524 Lung H3122 DMSO 233 9 480 13 0 65 62 KLF12,LINC00392
SE_02_071300589 chr13:73698402-73718007 Sample_02_0713 Pancreas BxPC3_sgTP63 589 6 477 12 0 65 62 KLF12,LINC00392
SE_02_070700768 chr13:73700732-73716670 Sample_02_0707 Pancreas BxPC3 WT 768 5 389 9 0 61 62 KLF12,LINC00392
SE_02_050700456 chr13:73701661-73715771 Sample_02_0507 Esophagus TE7_1 456 7 342 9 0 53 62 KLF12,LINC00392
SE_02_105901076 chr13:73741177-73779749 Sample_02_1059 Bone A673_WT 1076 8 1079 24 9 85 42 KLF12,LINC00392
SE_02_147301076 chr13:73741177-73779749 Sample_02_1473 Bone A-673 1076 8 1079 24 9 85 42 KLF12,LINC00392
SE_02_143201395 chr13:73741327-73810138 Sample_02_1432 Bone A673 STAG2 WT 1395 24 1903 44 11 129 42 KLF12,LINC00392
SE_02_148500299 chr13:73754265-73810773 Sample_02_1485 Bone SK-ES-1 299 13 1553 37 9 118 42 KLF12,LINC00392
Genomic distribution of SEs associated with LINC00392
Genome Browser

The strength of the tissue affected by the gene

Expression of LINC00392

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)